RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 LOC105371267A0A1B0GV96 52 aa3.99□□□□□ -1.77
SCN9A-206ENST00000472119 KRTAP1-4P0C5Y4 121 aa3.99□□□□□ -1.77
SCN9A-206ENST00000472119 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
SCN9A-206ENST00000472119 SMCR5Q8TEV8 140 aa3.99□□□□□ -1.77
SCN9A-206ENST00000472119 TRAV13-2A0A0B4J235 113 aa3.98□□□□□ -1.77
SCN9A-206ENST00000472119 ERC2-IT1O76042 136 aa3.98□□□□□ -1.77
SCN9A-206ENST00000472119 Q9BRP9 147 aa3.98□□□□□ -1.77
SCN9A-206ENST00000472119 PRO1933Q9H354 126 aa3.98□□□□□ -1.77
SCN9A-206ENST00000472119 HINT1P49773 126 aaPredicted RBP3.97□□□□□ -1.77
SCN9A-206ENST00000472119 C6orf99Q4VX62 202 aa3.97□□□□□ -1.77
SCN9A-206ENST00000472119 Q6ZRX8 168 aa3.97□□□□□ -1.77
SCN9A-206ENST00000472119 CEND1Q8N111 149 aa3.97□□□□□ -1.77
SCN9A-206ENST00000472119 UQCR10Q9UDW1 63 aa3.97□□□□□ -1.77
SCN9A-206ENST00000472119 CBY1Q9Y3M2 126 aa3.97□□□□□ -1.77
SCN9A-206ENST00000472119 TNXBP22105 4242 aa3.97□□□□□ -1.77
SCN9A-206ENST00000472119 A0A087X002 238 aa3.96□□□□□ -1.78
SCN9A-206ENST00000472119 SMIM6P0DI80 62 aa3.96□□□□□ -1.78
SCN9A-206ENST00000472119 COX7BP24311 80 aa3.96□□□□□ -1.78
SCN9A-206ENST00000472119 RPL13AP40429 203 aaKnown RBP3.96□□□□□ -1.78
SCN9A-206ENST00000472119 TAL2Q16559 108 aa3.96□□□□□ -1.78
SCN9A-206ENST00000472119 SMIM11BQ8TCY0 68 aa3.96□□□□□ -1.78
SCN9A-206ENST00000472119 H7C2G1 150 aa3.95□□□□□ -1.78
SCN9A-206ENST00000472119 FXYD2P54710 66 aa3.95□□□□□ -1.78
SCN9A-206ENST00000472119 GAGE2AQ6NT46 116 aa3.95□□□□□ -1.78
SCN9A-206ENST00000472119 RAB37Q96AX2 223 aa3.95□□□□□ -1.78
SCN9A-206ENST00000472119 SPRR4Q96PI1 79 aa3.95□□□□□ -1.78
SCN9A-206ENST00000472119 TRBV7-6A0A0J9YX20 115 aa3.94□□□□□ -1.78
SCN9A-206ENST00000472119 KRTAP16-1A8MUX0 517 aa3.94□□□□□ -1.78
SCN9A-206ENST00000472119 CRYGAP11844 174 aa3.94□□□□□ -1.78
SCN9A-206ENST00000472119 ELOF1P60002 83 aaKnown RBP3.94□□□□□ -1.78
SCN9A-206ENST00000472119 HSD52Q0P140 79 aa3.94□□□□□ -1.78
SCN9A-206ENST00000472119 ST20-AS1Q8NBB2 130 aa3.94□□□□□ -1.78
SCN9A-206ENST00000472119 ZNF706Q9Y5V0 76 aaPredicted RBP3.94□□□□□ -1.78
SCN9A-206ENST00000472119 A0A0B4J2C4 111 aa3.93□□□□□ -1.78
SCN9A-206ENST00000472119 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
SCN9A-206ENST00000472119 FAM229BQ4G0N7 80 aa3.93□□□□□ -1.78
SCN9A-206ENST00000472119 KRTAP13-2Q52LG2 175 aa3.93□□□□□ -1.78
SCN9A-206ENST00000472119 TYMSOSQ8TAI1 123 aa3.93□□□□□ -1.78
SCN9A-206ENST00000472119 DHRS4-AS1Q9P1J3 65 aa3.93□□□□□ -1.78
SCN9A-206ENST00000472119 K7ERJ3 54 aa3.92□□□□□ -1.78
SCN9A-206ENST00000472119 CTAG1AP78358 180 aa3.92□□□□□ -1.78
SCN9A-206ENST00000472119 VAMP3Q15836 100 aa3.92□□□□□ -1.78
SCN9A-206ENST00000472119 C3orf22Q8N5N4 141 aa3.92□□□□□ -1.78
SCN9A-206ENST00000472119 DEFB105AQ8NG35 78 aa3.92□□□□□ -1.78
SCN9A-206ENST00000472119 NHP2Q9NX24 153 aaKnown RBP3.92□□□□□ -1.78
SCN9A-206ENST00000472119 PRO1854Q9UHT4 67 aa3.92□□□□□ -1.78
SCN9A-206ENST00000472119 HERC1Q15751 4861 aa3.91□□□□□ -1.78
SCN9A-206ENST00000472119 Q1RN00 199 aa3.91□□□□□ -1.78
SCN9A-206ENST00000472119 LINC00483Q53H64 154 aa3.91□□□□□ -1.78
SCN9A-206ENST00000472119 BVES-AS1Q5T3Y7 98 aa3.91□□□□□ -1.78
SCN9A-206ENST00000472119 IGLV9-49A0A0B4J1Y8 123 aa3.9□□□□□ -1.79
SCN9A-206ENST00000472119 TSTD3H0UI37 97 aa3.9□□□□□ -1.79
SCN9A-206ENST00000472119 TSPAN13O95857 204 aa3.9□□□□□ -1.79
SCN9A-206ENST00000472119 LINC00575Q6W349 94 aa3.9□□□□□ -1.79
SCN9A-206ENST00000472119 A0A0A0MQY5 61 aa3.89□□□□□ -1.79
SCN9A-206ENST00000472119 hADV29S1A0JD25 119 aa3.89□□□□□ -1.79
SCN9A-206ENST00000472119 SLC25A20O43772 301 aa3.89□□□□□ -1.79
SCN9A-206ENST00000472119 SPRR1BP22528 89 aa3.88□□□□□ -1.79
SCN9A-206ENST00000472119 MOBPQ13875 183 aa3.88□□□□□ -1.79
SCN9A-206ENST00000472119 FAM218AQ96MZ4 157 aa3.88□□□□□ -1.79
SCN9A-206ENST00000472119 TEX49A0A1B0GTD5 131 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 H0YGX0 51 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 M0R143 59 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 PSMB2P49721 201 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 C9orf153Q5TBE3 101 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 Q6ZQY7 126 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 Q8N377 158 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 LINC00304Q8N9R0 145 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 Q8NBF4 154 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 LAMTOR3Q9UHA4 124 aa3.87□□□□□ -1.79
SCN9A-206ENST00000472119 IGLV5-48A0A075B6I7 105 aa3.86□□□□□ -1.79
SCN9A-206ENST00000472119 BATFQ16520 125 aa3.86□□□□□ -1.79
SCN9A-206ENST00000472119 SSBP3-AS1Q7Z2R9 100 aa3.86□□□□□ -1.79
SCN9A-206ENST00000472119 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.85□□□□□ -1.79
SCN9A-206ENST00000472119 CLEC2BQ92478 149 aa3.85□□□□□ -1.79
SCN9A-206ENST00000472119 A0A0G2JQZ4 141 aa3.84□□□□□ -1.79
SCN9A-206ENST00000472119 SNCGO76070 127 aa3.84□□□□□ -1.79
SCN9A-206ENST00000472119 COX6CP09669 75 aa3.84□□□□□ -1.79
SCN9A-206ENST00000472119 SCGB1C2P0DMR2 95 aa3.84□□□□□ -1.79
SCN9A-206ENST00000472119 NAA38Q9BRA0 125 aaKnown RBP3.84□□□□□ -1.79
SCN9A-206ENST00000472119 SPAG11AQ6PDA7 123 aa3.83□□□□□ -1.8
SCN9A-206ENST00000472119 HRCT1Q6UXD1 115 aa3.83□□□□□ -1.8
SCN9A-206ENST00000472119 RETNLBQ9BQ08 111 aa3.83□□□□□ -1.8
SCN9A-206ENST00000472119 SPINK1P00995 79 aa3.82□□□□□ -1.8
SCN9A-206ENST00000472119 PRR4Q16378 134 aa3.82□□□□□ -1.8
SCN9A-206ENST00000472119 SNHG12Q9BXW3 62 aa3.82□□□□□ -1.8
SCN9A-206ENST00000472119 A0A1B0GX51 115 aa3.81□□□□□ -1.8
SCN9A-206ENST00000472119 F8WEM9 126 aa3.81□□□□□ -1.8
SCN9A-206ENST00000472119 FABP2P12104 132 aa3.81□□□□□ -1.8
SCN9A-206ENST00000472119 OCIAD2Q56VL3 154 aa3.81□□□□□ -1.8
SCN9A-206ENST00000472119 H3BUT2 72 aa3.8□□□□□ -1.8
SCN9A-206ENST00000472119 DNAL4O96015 105 aa3.8□□□□□ -1.8
SCN9A-206ENST00000472119 PPDPFLQ8WWR9 84 aa3.8□□□□□ -1.8
SCN9A-206ENST00000472119 PCP4L1A6NKN8 68 aa3.79□□□□□ -1.8
SCN9A-206ENST00000472119 LST1O00453 97 aa3.79□□□□□ -1.8
SCN9A-206ENST00000472119 TAX1BP3O14907 124 aa3.79□□□□□ -1.8
SCN9A-206ENST00000472119 TCL1BO95988 128 aa3.79□□□□□ -1.8
SCN9A-206ENST00000472119 NDUFV3P56181 108 aaKnown RBP3.79□□□□□ -1.8
SCN9A-206ENST00000472119 ORMDL1Q9P0S3 153 aa3.79□□□□□ -1.8
SCN9A-206ENST00000472119 HMCN2Q8NDA2 5059 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms