RNA–Protein interactions for RNA: ENST00000471887.1

HDAC9-221, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-221ENST00000471887 FSIP2Q5CZC0 6907 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 IGKV2D-26A0A0A0MRZ7 120 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 IGLC3P0DOY3 106 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 SPRR1AP35321 89 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 PRLHP81277 87 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 COX17Q14061 63 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 KRTAP19-2Q3LHN2 52 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 SFTA2Q6UW10 78 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 COX7B2Q8TF08 81 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 PLEKHB2Q96CS7 222 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 ZNF625Q96I27 306 aaPredicted RBP1.48□□□□□ -2.17
HDAC9-221ENST00000471887 SPRR4Q96PI1 79 aa1.48□□□□□ -2.17
HDAC9-221ENST00000471887 TRAV9-1A0A075B6T8 112 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 TMEM238C9JI98 176 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 H3BRM9 83 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 SPINK1P00995 79 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 MT-ND4LP03901 98 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 MP68P56378 58 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 VAMP3Q15836 100 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 FAM19A2Q8N3H0 131 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 CST9LQ9H4G1 147 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 ERG28Q9UKR5 140 aa1.47□□□□□ -2.17
HDAC9-221ENST00000471887 SPINK8P0C7L1 97 aa1.46□□□□□ -2.18
HDAC9-221ENST00000471887 ADCYAP1P18509 176 aa1.46□□□□□ -2.18
HDAC9-221ENST00000471887 MT1HP80294 61 aa1.46□□□□□ -2.18
HDAC9-221ENST00000471887 SCGB3A1Q96QR1 104 aa1.46□□□□□ -2.18
HDAC9-221ENST00000471887 KCNQ1DNQ9H478 68 aa1.46□□□□□ -2.18
HDAC9-221ENST00000471887 LOC107984156A0A0G2JMH3 177 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 A0A1B0GVG6 124 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 RAB5BP61020 215 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 SSBP3-AS1Q7Z2R9 100 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 ARL17AQ8IVW1 177 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 DAND5Q8N907 189 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 SMCR5Q8TEV8 140 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 NDUFA12Q9UI09 145 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 SSPOA2VEC9 5147 aa1.45□□□□□ -2.18
HDAC9-221ENST00000471887 TRBV10-2A0A0K0K1G8 114 aa1.44□□□□□ -2.18
HDAC9-221ENST00000471887 C11orf86A6NJI1 115 aa1.44□□□□□ -2.18
HDAC9-221ENST00000471887 HBDP02042 147 aa1.44□□□□□ -2.18
HDAC9-221ENST00000471887 TRAV12-1A0A0B4J245 112 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 TRBV10-3A0A0K0K1G6 114 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 ETDCA0A1B0GVM5 59 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 LINC00587B1AMM8 73 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 SPRR1BP22528 89 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 RAB14P61106 215 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 CLLU1Q5K131 121 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 Q5XG85 94 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 Q6ZRX8 168 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 Q9BRP9 147 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 SMCO4Q9NRQ5 59 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 USH2AO75445 5202 aa1.43□□□□□ -2.18
HDAC9-221ENST00000471887 A0A0G2JQZ4 141 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 TMEM218A2RU14 115 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 NCR3O14931 201 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 ERC2-IT1O76042 136 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 NDUFC2O95298 119 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 LINC00614P0C842 121 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 SMIM13P0DJ93 91 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 S100PP25815 95 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 LINC00158P58513 81 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 S100A12P80511 92 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 TMEM170BQ5T4T1 132 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 BAGE3Q86Y29 109 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 BOD1L2Q8IYS8 172 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 C18orf32Q8TCD1 76 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 LIMD2Q9BT23 127 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 SEC11CQ9BY50 192 aa1.42□□□□□ -2.18
HDAC9-221ENST00000471887 SPANXB1Q9NS25 103 aaPredicted RBP1.42□□□□□ -2.18
HDAC9-221ENST00000471887 FLGP20930 4061 aaPredicted RBP1.42□□□□□ -2.18
HDAC9-221ENST00000471887 MYMXA0A1B0GTQ4 84 aa1.41□□□□□ -2.18
HDAC9-221ENST00000471887 DDTP30046 118 aa1.41□□□□□ -2.18
HDAC9-221ENST00000471887 IFITM2Q01629 132 aa1.41□□□□□ -2.18
HDAC9-221ENST00000471887 CD164Q04900 197 aa1.41□□□□□ -2.18
HDAC9-221ENST00000471887 FABP9Q0Z7S8 132 aa1.41□□□□□ -2.18
HDAC9-221ENST00000471887 JOSD1Q15040 202 aaPredicted RBP1.41□□□□□ -2.18
HDAC9-221ENST00000471887 RHEBQ15382 184 aa1.41□□□□□ -2.18
HDAC9-221ENST00000471887 MEIG1Q5JSS6 88 aa1.41□□□□□ -2.18
HDAC9-221ENST00000471887 IFI27L1Q96BM0 104 aa1.41□□□□□ -2.18
HDAC9-221ENST00000471887 CHCHD1Q96BP2 118 aaKnown RBP1.41□□□□□ -2.18
HDAC9-221ENST00000471887 CHTOPQ9Y3Y2 248 aaKnown RBP1.41□□□□□ -2.18
HDAC9-221ENST00000471887 TRAV23DV6A0A075B6W5 121 aa1.4□□□□□ -2.19
HDAC9-221ENST00000471887 C8orf87E5RJ46 101 aa1.4□□□□□ -2.19
HDAC9-221ENST00000471887 LEPROTO15243 131 aa1.4□□□□□ -2.19
HDAC9-221ENST00000471887 NDUFA6P56556 154 aa1.4□□□□□ -2.19
HDAC9-221ENST00000471887 TSPEAR-AS2P59090 65 aa1.4□□□□□ -2.19
HDAC9-221ENST00000471887 RPL37P61927 97 aaKnown RBP1.4□□□□□ -2.19
HDAC9-221ENST00000471887 PMCHL1Q16048 86 aa1.4□□□□□ -2.19
HDAC9-221ENST00000471887 C9orf153Q5TBE3 101 aa1.4□□□□□ -2.19
HDAC9-221ENST00000471887 J3QQQ9 107 aa1.39□□□□□ -2.19
HDAC9-221ENST00000471887 PLNP26678 52 aa1.39□□□□□ -2.19
HDAC9-221ENST00000471887 SOSTDC1Q6X4U4 206 aa1.39□□□□□ -2.19
HDAC9-221ENST00000471887 COMMD7Q86VX2 200 aa1.39□□□□□ -2.19
HDAC9-221ENST00000471887 IGLV5-48A0A075B6I7 105 aa1.38□□□□□ -2.19
HDAC9-221ENST00000471887 TIMM17BO60830 172 aa1.38□□□□□ -2.19
HDAC9-221ENST00000471887 ELOF1P60002 83 aaKnown RBP1.38□□□□□ -2.19
HDAC9-221ENST00000471887 S100A7L2Q5SY68 101 aa1.38□□□□□ -2.19
HDAC9-221ENST00000471887 C1orf195Q5TG92 126 aa1.38□□□□□ -2.19
HDAC9-221ENST00000471887 MIEN1Q9BRT3 115 aa1.38□□□□□ -2.19
HDAC9-221ENST00000471887 SPANXDQ9BXN6 97 aa1.38□□□□□ -2.19
HDAC9-221ENST00000471887 PRO1933Q9H354 126 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms