RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 SERP1Q9Y6X1 66 aa7.79□□□□□ -1.16
LTA-215ENST00000471842 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
LTA-215ENST00000471842 hADV29S1A0JD25 119 aa7.78□□□□□ -1.16
LTA-215ENST00000471842 CFC1BP0CG36 223 aa7.78□□□□□ -1.16
LTA-215ENST00000471842 CFC1P0CG37 223 aa7.78□□□□□ -1.16
LTA-215ENST00000471842 SCGB1D4Q6XE38 83 aa7.78□□□□□ -1.16
LTA-215ENST00000471842 Q8NDZ9 215 aa7.78□□□□□ -1.16
LTA-215ENST00000471842 LPAP08519 4548 aa7.78□□□□□ -1.16
LTA-215ENST00000471842 RNF213Q63HN8 5207 aa7.77□□□□□ -1.17
LTA-215ENST00000471842 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
LTA-215ENST00000471842 HERVK_113P61574 105 aa7.77□□□□□ -1.17
LTA-215ENST00000471842 NPC2P61916 151 aa7.76□□□□□ -1.17
LTA-215ENST00000471842 KRTAP13-1Q8IUC0 172 aa7.76□□□□□ -1.17
LTA-215ENST00000471842 M0R378 163 aa7.75□□□□□ -1.17
LTA-215ENST00000471842 NCR3O14931 201 aa7.75□□□□□ -1.17
LTA-215ENST00000471842 HIGD2AQ9BW72 106 aa7.75□□□□□ -1.17
LTA-215ENST00000471842 COX6CP09669 75 aa7.75□□□□□ -1.17
LTA-215ENST00000471842 SMIM26A0A096LP01 95 aa7.74□□□□□ -1.17
LTA-215ENST00000471842 DSCR8Q96T75 97 aa7.74□□□□□ -1.17
LTA-215ENST00000471842 FAM236DA0A1B0GTK5 79 aa7.73□□□□□ -1.17
LTA-215ENST00000471842 FAM236CP0DP71 79 aa7.73□□□□□ -1.17
LTA-215ENST00000471842 KRTAP13-2Q52LG2 175 aa7.73□□□□□ -1.17
LTA-215ENST00000471842 MIR7-3HGQ8N6C7 128 aa7.73□□□□□ -1.17
LTA-215ENST00000471842 LAMTOR3Q9UHA4 124 aa7.73□□□□□ -1.17
LTA-215ENST00000471842 NDUFA12Q9UI09 145 aa7.73□□□□□ -1.17
LTA-215ENST00000471842 DAND5Q8N907 189 aa7.72□□□□□ -1.17
LTA-215ENST00000471842 FAM229BQ4G0N7 80 aa7.71□□□□□ -1.18
LTA-215ENST00000471842 LINC00304Q8N9R0 145 aa7.71□□□□□ -1.18
LTA-215ENST00000471842 RETNLBQ9BQ08 111 aa7.71□□□□□ -1.18
LTA-215ENST00000471842 TSPEAR-AS2P59090 65 aa7.68□□□□□ -1.18
LTA-215ENST00000471842 LEPROTO15243 131 aa7.68□□□□□ -1.18
LTA-215ENST00000471842 Q1RN00 199 aa7.68□□□□□ -1.18
LTA-215ENST00000471842 ETDCA0A1B0GVM5 59 aa7.67□□□□□ -1.18
LTA-215ENST00000471842 LST1O00453 97 aa7.67□□□□□ -1.18
LTA-215ENST00000471842 PRYO14603 147 aa7.67□□□□□ -1.18
LTA-215ENST00000471842 LGALS3P17931 250 aaKnown RBP7.67□□□□□ -1.18
LTA-215ENST00000471842 ATP5EP56381 51 aaPredicted RBP7.67□□□□□ -1.18
LTA-215ENST00000471842 CD164Q04900 197 aa7.67□□□□□ -1.18
LTA-215ENST00000471842 TRBV10-3A0A0K0K1G6 114 aa7.66□□□□□ -1.18
LTA-215ENST00000471842 Q6JHZ5 121 aa7.66□□□□□ -1.18
LTA-215ENST00000471842 ZNF706Q9Y5V0 76 aaPredicted RBP7.66□□□□□ -1.18
LTA-215ENST00000471842 SPRR4Q96PI1 79 aa7.64□□□□□ -1.19
LTA-215ENST00000471842 TRIAP1O43715 76 aa7.63□□□□□ -1.19
LTA-215ENST00000471842 PMAIP1Q13794 54 aa7.63□□□□□ -1.19
LTA-215ENST00000471842 SMCR5Q8TEV8 140 aa7.63□□□□□ -1.19
LTA-215ENST00000471842 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
LTA-215ENST00000471842 CYSTM1Q9H1C7 97 aa7.62□□□□□ -1.19
LTA-215ENST00000471842 KCNQ1DNQ9H478 68 aa7.62□□□□□ -1.19
LTA-215ENST00000471842 S100A7L2Q5SY68 101 aa7.61□□□□□ -1.19
LTA-215ENST00000471842 C4orf48Q5BLP8 95 aa7.6□□□□□ -1.19
LTA-215ENST00000471842 IGLV7-46A0A075B6I9 117 aa7.59□□□□□ -1.19
LTA-215ENST00000471842 SPRR1AP35321 89 aa7.59□□□□□ -1.19
LTA-215ENST00000471842 Q8NBF4 154 aa7.59□□□□□ -1.19
LTA-215ENST00000471842 BRK1Q8WUW1 75 aa7.59□□□□□ -1.19
LTA-215ENST00000471842 ATP5EP2Q5VTU8 51 aa7.58□□□□□ -1.2
LTA-215ENST00000471842 PRR15Q8IV56 129 aa7.58□□□□□ -1.2
LTA-215ENST00000471842 IGLV9-49A0A0B4J1Y8 123 aa7.57□□□□□ -1.2
LTA-215ENST00000471842 A0A0J9YXY3 114 aa7.56□□□□□ -1.2
LTA-215ENST00000471842 KRTAP4-16G5E9R7 235 aaPredicted RBP7.56□□□□□ -1.2
LTA-215ENST00000471842 NDUFC1O43677 76 aa7.56□□□□□ -1.2
LTA-215ENST00000471842 EIF4EBP3O60516 100 aaPredicted RBP7.56□□□□□ -1.2
LTA-215ENST00000471842 SPAG11AQ6PDA7 123 aa7.56□□□□□ -1.2
LTA-215ENST00000471842 TRAV23DV6A0A075B6W5 121 aa7.55□□□□□ -1.2
LTA-215ENST00000471842 MUSTN1Q8IVN3 82 aa7.55□□□□□ -1.2
LTA-215ENST00000471842 TRBV7-6A0A0J9YX20 115 aa7.55□□□□□ -1.2
LTA-215ENST00000471842 H7C2G1 150 aa7.55□□□□□ -1.2
LTA-215ENST00000471842 ERC2-IT1O76042 136 aa7.55□□□□□ -1.2
LTA-215ENST00000471842 MOBPQ13875 183 aa7.55□□□□□ -1.2
LTA-215ENST00000471842 ADAMTSL4-AS1Q5T5F5 129 aa7.55□□□□□ -1.2
LTA-215ENST00000471842 SOSTDC1Q6X4U4 206 aa7.55□□□□□ -1.2
LTA-215ENST00000471842 Q6ZRX8 168 aa7.54□□□□□ -1.2
LTA-215ENST00000471842 FP248Q71RG6 208 aaPredicted RBP7.54□□□□□ -1.2
LTA-215ENST00000471842 A0A0U1RQV1 116 aa7.53□□□□□ -1.2
LTA-215ENST00000471842 Q9BRP9 147 aa7.53□□□□□ -1.2
LTA-215ENST00000471842 IGLV6-57P01721 117 aa7.52□□□□□ -1.21
LTA-215ENST00000471842 TPRXLQ17RH7 258 aa7.52□□□□□ -1.21
LTA-215ENST00000471842 ZNF73O43830 326 aaPredicted RBP7.51□□□□□ -1.21
LTA-215ENST00000471842 LINC00483Q53H64 154 aa7.51□□□□□ -1.21
LTA-215ENST00000471842 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
LTA-215ENST00000471842 H7BZZ5 65 aa7.49□□□□□ -1.21
LTA-215ENST00000471842 TIMM17BO60830 172 aa7.49□□□□□ -1.21
LTA-215ENST00000471842 DNAL4O96015 105 aa7.49□□□□□ -1.21
LTA-215ENST00000471842 MUC2Q02817 5179 aa7.49□□□□□ -1.21
LTA-215ENST00000471842 LINC00308Q8TCZ7 52 aa7.49□□□□□ -1.21
LTA-215ENST00000471842 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
LTA-215ENST00000471842 GHRHP01286 108 aa7.49□□□□□ -1.21
LTA-215ENST00000471842 CLEC2BQ92478 149 aa7.49□□□□□ -1.21
LTA-215ENST00000471842 SPINK1P00995 79 aa7.48□□□□□ -1.21
LTA-215ENST00000471842 ST20-AS1Q8NBB2 130 aa7.48□□□□□ -1.21
LTA-215ENST00000471842 CCKP06307 115 aa7.47□□□□□ -1.21
LTA-215ENST00000471842 LITAFQ99732 161 aa7.47□□□□□ -1.21
LTA-215ENST00000471842 BAALC-AS2P0C853 105 aa7.46□□□□□ -1.22
LTA-215ENST00000471842 C20orf197Q8N268 126 aa7.45□□□□□ -1.22
LTA-215ENST00000471842 SSBP3-AS1Q7Z2R9 100 aa7.44□□□□□ -1.22
LTA-215ENST00000471842 TRAV13-2A0A0B4J235 113 aa7.43□□□□□ -1.22
LTA-215ENST00000471842 RBM3P98179 157 aaKnown RBP7.43□□□□□ -1.22
LTA-215ENST00000471842 OBSCN-AS1Q96MR7 158 aa7.43□□□□□ -1.22
LTA-215ENST00000471842 COX7BP24311 80 aa7.42□□□□□ -1.22
LTA-215ENST00000471842 IGKV3D-7A0A0C4DH55 119 aa7.41□□□□□ -1.22
LTA-215ENST00000471842 KRTAP13-3Q3SY46 172 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms