RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 USP34Q70CQ2 3546 aa1.62□□□□□ -2.15
SCN3A-207ENST00000471697 KLK9Q2XQG4 91 aa1.62□□□□□ -2.15
SCN3A-207ENST00000471697 ASH1LQ9NR48 2969 aaKnown RBP1.62□□□□□ -2.15
SCN3A-207ENST00000471697 MUC6Q6W4X9 2439 aa1.62□□□□□ -2.15
SCN3A-207ENST00000471697 ZNF462Q96JM2 2506 aa1.62□□□□□ -2.15
SCN3A-207ENST00000471697 DNHD1Q96M86 4753 aa1.61□□□□□ -2.15
SCN3A-207ENST00000471697 DEFB108AA8MXU0 73 aa1.61□□□□□ -2.15
SCN3A-207ENST00000471697 PCOTHQ58A44 107 aa1.61□□□□□ -2.15
SCN3A-207ENST00000471697 WFDC10BQ8IUB3 73 aa1.61□□□□□ -2.15
SCN3A-207ENST00000471697 WFDC13Q8IUB5 93 aa1.61□□□□□ -2.15
SCN3A-207ENST00000471697 CENPFP49454 3210 aa1.61□□□□□ -2.15
SCN3A-207ENST00000471697 WNK2Q9Y3S1 2297 aa1.61□□□□□ -2.15
SCN3A-207ENST00000471697 USP24Q9UPU5 2620 aa1.61□□□□□ -2.15
SCN3A-207ENST00000471697 ANKRD11Q6UB99 2663 aaPredicted RBP1.61□□□□□ -2.15
SCN3A-207ENST00000471697 TPRP12270 2363 aaKnown RBP1.61□□□□□ -2.15
SCN3A-207ENST00000471697 PP632Q6XCG6 107 aa1.6□□□□□ -2.15
SCN3A-207ENST00000471697 ZDBF2Q9HCK1 2354 aa1.59□□□□□ -2.15
SCN3A-207ENST00000471697 DNAH12Q6ZR08 3092 aa1.59□□□□□ -2.15
SCN3A-207ENST00000471697 SPRR5A0A1B0GTR4 108 aa1.59□□□□□ -2.15
SCN3A-207ENST00000471697 DEFB109BQ30KR1 87 aa1.59□□□□□ -2.15
SCN3A-207ENST00000471697 TOMM7Q9P0U1 55 aa1.59□□□□□ -2.15
SCN3A-207ENST00000471697 SPTBN4Q9H254 2564 aa1.59□□□□□ -2.15
SCN3A-207ENST00000471697 CEP290O15078 2479 aa1.59□□□□□ -2.16
SCN3A-207ENST00000471697 C5orf42Q9H799 3197 aa1.59□□□□□ -2.16
SCN3A-207ENST00000471697 ZNF292O60281 2723 aa1.59□□□□□ -2.16
SCN3A-207ENST00000471697 UBE2DNLQ8IWF7 75 aa1.58□□□□□ -2.16
SCN3A-207ENST00000471697 COX14Q96I36 57 aa1.58□□□□□ -2.16
SCN3A-207ENST00000471697 MYO18BQ8IUG5 2567 aa1.57□□□□□ -2.16
SCN3A-207ENST00000471697 DNAH14Q0VDD8 3507 aa1.57□□□□□ -2.16
SCN3A-207ENST00000471697 FLG2Q5D862 2391 aaPredicted RBP1.57□□□□□ -2.16
SCN3A-207ENST00000471697 DOPEY1Q5JWR5 2465 aa1.57□□□□□ -2.16
SCN3A-207ENST00000471697 REV3LO60673 3130 aa1.57□□□□□ -2.16
SCN3A-207ENST00000471697 H0YGG7 62 aa1.57□□□□□ -2.16
SCN3A-207ENST00000471697 H3BUA1 57 aa1.57□□□□□ -2.16
SCN3A-207ENST00000471697 NAV3Q8IVL0 2385 aa1.57□□□□□ -2.16
SCN3A-207ENST00000471697 PKDREJQ9NTG1 2253 aa1.56□□□□□ -2.16
SCN3A-207ENST00000471697 MMP24-AS1A0A0U1RRL7 71 aa1.56□□□□□ -2.16
SCN3A-207ENST00000471697 H0YAA0 97 aa1.56□□□□□ -2.16
SCN3A-207ENST00000471697 RPL37P61927 97 aaKnown RBP1.56□□□□□ -2.16
SCN3A-207ENST00000471697 UNQ6190/PRO20217Q6UXQ8 127 aa1.56□□□□□ -2.16
SCN3A-207ENST00000471697 Q6ZSA8 131 aa1.56□□□□□ -2.16
SCN3A-207ENST00000471697 DEFB123Q8N688 67 aa1.56□□□□□ -2.16
SCN3A-207ENST00000471697 RELNP78509 3460 aa1.56□□□□□ -2.16
SCN3A-207ENST00000471697 ASPMQ8IZT6 3477 aa1.56□□□□□ -2.16
SCN3A-207ENST00000471697 WDFY4Q6ZS81 3184 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 SPEGQ15772 3267 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 FBN3Q75N90 2809 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 NCOR1O75376 2440 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 H1FX-AS1Q4G0G2 97 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 KAAG1Q9UBP8 84 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 ITPR3Q14573 2671 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 GCN1Q92616 2671 aaKnown RBP1.55□□□□□ -2.16
SCN3A-207ENST00000471697 HTTP42858 3142 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 MAP1BP46821 2468 aaKnown RBP1.55□□□□□ -2.16
SCN3A-207ENST00000471697 XIRP2A4UGR9 3374 aa1.55□□□□□ -2.16
SCN3A-207ENST00000471697 DMDP11532 3685 aa1.54□□□□□ -2.16
SCN3A-207ENST00000471697 BRD3OSQ6XYD6 125 aa1.54□□□□□ -2.16
SCN3A-207ENST00000471697 ABCA12Q86UK0 2595 aa1.54□□□□□ -2.16
SCN3A-207ENST00000471697 SMG1Q96Q15 3661 aaKnown RBP1.54□□□□□ -2.16
SCN3A-207ENST00000471697 OTOGLQ3ZCN5 2332 aa1.54□□□□□ -2.16
SCN3A-207ENST00000471697 LYNX1P0DP58 116 aa1.53□□□□□ -2.16
SCN3A-207ENST00000471697 KRTAP13-4Q3LI77 160 aa1.53□□□□□ -2.16
SCN3A-207ENST00000471697 FAM208BQ5VWN6 2430 aa1.52□□□□□ -2.17
SCN3A-207ENST00000471697 DEFB103AP81534 67 aa1.52□□□□□ -2.17
SCN3A-207ENST00000471697 CLPSL2Q6UWE3 100 aa1.52□□□□□ -2.17
SCN3A-207ENST00000471697 ACACBO00763 2458 aa1.52□□□□□ -2.17
SCN3A-207ENST00000471697 PTPRZ1P23471 2315 aaPredicted RBP1.52□□□□□ -2.17
SCN3A-207ENST00000471697 CDH23Q9H251 3354 aa1.52□□□□□ -2.17
SCN3A-207ENST00000471697 MYO15AQ9UKN7 3530 aa1.52□□□□□ -2.17
SCN3A-207ENST00000471697 NCOR2Q9Y618 2525 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 NBPF19A0A087WUL8 3843 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 KALRNO60229 2985 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 HECTD1Q9ULT8 2610 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 A8MTW9 85 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 STATHP02808 62 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 DEFB130BP0DP73 79 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 DEFB130AP0DP74 79 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 ZFYVE26Q68DK2 2539 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 UBR4Q5T4S7 5183 aa1.51□□□□□ -2.17
SCN3A-207ENST00000471697 RP1L1Q8IWN7 2480 aaPredicted RBP1.5□□□□□ -2.17
SCN3A-207ENST00000471697 CELSR3Q9NYQ7 3312 aa1.5□□□□□ -2.17
SCN3A-207ENST00000471697 K7EIL1 84 aa1.5□□□□□ -2.17
SCN3A-207ENST00000471697 DEFB104AQ8WTQ1 72 aa1.5□□□□□ -2.17
SCN3A-207ENST00000471697 IGF2RP11717 2491 aa1.5□□□□□ -2.17
SCN3A-207ENST00000471697 HELZ2Q9BYK8 2649 aaKnown RBP1.5□□□□□ -2.17
SCN3A-207ENST00000471697 CEP250Q9BV73 2442 aa1.49□□□□□ -2.17
SCN3A-207ENST00000471697 ROS1P08922 2347 aa1.49□□□□□ -2.17
SCN3A-207ENST00000471697 SPRR1AP35321 89 aa1.49□□□□□ -2.17
SCN3A-207ENST00000471697 DEFB119Q8N690 84 aa1.49□□□□□ -2.17
SCN3A-207ENST00000471697 DEFB105AQ8NG35 78 aa1.49□□□□□ -2.17
SCN3A-207ENST00000471697 MYO9AB2RTY4 2548 aa1.49□□□□□ -2.17
SCN3A-207ENST00000471697 PCNX1Q96RV3 2341 aa1.49□□□□□ -2.17
SCN3A-207ENST00000471697 SPTBN1Q01082 2364 aaKnown RBP1.48□□□□□ -2.17
SCN3A-207ENST00000471697 ACACAQ13085 2346 aa1.48□□□□□ -2.17
SCN3A-207ENST00000471697 H3BUX3 64 aa1.48□□□□□ -2.17
SCN3A-207ENST00000471697 PIEZO2Q9H5I5 2752 aa1.47□□□□□ -2.17
SCN3A-207ENST00000471697 PCLOQ9Y6V0 5065 aa1.47□□□□□ -2.17
SCN3A-207ENST00000471697 SPTA1P02549 2419 aa1.47□□□□□ -2.17
SCN3A-207ENST00000471697 C2CD3Q4AC94 2353 aa1.47□□□□□ -2.17
SCN3A-207ENST00000471697 UBR5O95071 2799 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms