RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 TCL1BO95988 128 aa12.75□□□□□ -0.37
RNF220-208ENST00000471494 Q6JHZ5 121 aa12.73□□□□□ -0.37
RNF220-208ENST00000471494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.73□□□□□ -0.37
RNF220-208ENST00000471494 C14orf144Q96I85 54 aa12.73□□□□□ -0.37
RNF220-208ENST00000471494 PAM16Q9Y3D7 125 aa12.72□□□□□ -0.37
RNF220-208ENST00000471494 PCOTHQ58A44 107 aa12.71□□□□□ -0.37
RNF220-208ENST00000471494 SPATA45Q537H7 98 aa12.7□□□□□ -0.38
RNF220-208ENST00000471494 CLEC2BQ92478 149 aa12.7□□□□□ -0.38
RNF220-208ENST00000471494 IGLV8-61A0A075B6I0 122 aa12.69□□□□□ -0.38
RNF220-208ENST00000471494 PPDPFLQ8WWR9 84 aa12.69□□□□□ -0.38
RNF220-208ENST00000471494 RAB37Q96AX2 223 aa12.69□□□□□ -0.38
RNF220-208ENST00000471494 HIGD1BQ9P298 99 aa12.69□□□□□ -0.38
RNF220-208ENST00000471494 CFC1BP0CG36 223 aa12.68□□□□□ -0.38
RNF220-208ENST00000471494 CFC1P0CG37 223 aa12.68□□□□□ -0.38
RNF220-208ENST00000471494 OCIAD2Q56VL3 154 aa12.68□□□□□ -0.38
RNF220-208ENST00000471494 VAMP8Q9BV40 100 aa12.68□□□□□ -0.38
RNF220-208ENST00000471494 KRTAP9-2Q9BYQ4 174 aa12.68□□□□□ -0.38
RNF220-208ENST00000471494 IGFL1Q6UW32 110 aa12.67□□□□□ -0.38
RNF220-208ENST00000471494 SNHG12Q9BXW3 62 aa12.65□□□□□ -0.38
RNF220-208ENST00000471494 A0A0B4J2C4 111 aa12.64□□□□□ -0.39
RNF220-208ENST00000471494 TRBV7-7A0A0K0K1E9 115 aa12.64□□□□□ -0.39
RNF220-208ENST00000471494 SNCGO76070 127 aa12.62□□□□□ -0.39
RNF220-208ENST00000471494 C2orf91Q6ZV80 131 aa12.62□□□□□ -0.39
RNF220-208ENST00000471494 H0YGX0 51 aa12.59□□□□□ -0.39
RNF220-208ENST00000471494 H3BUT2 72 aa12.58□□□□□ -0.4
RNF220-208ENST00000471494 RPL37P61927 97 aaKnown RBP12.58□□□□□ -0.4
RNF220-208ENST00000471494 TMEM238LA0A1B0GVL6 79 aa12.56□□□□□ -0.4
RNF220-208ENST00000471494 A6NJY4 79 aa12.56□□□□□ -0.4
RNF220-208ENST00000471494 CEND1Q8N111 149 aa12.56□□□□□ -0.4
RNF220-208ENST00000471494 FAM218AQ96MZ4 157 aa12.54□□□□□ -0.4
RNF220-208ENST00000471494 PRO1854Q9UHT4 67 aa12.53□□□□□ -0.4
RNF220-208ENST00000471494 LCE2CQ5TA81 110 aa12.52□□□□□ -0.41
RNF220-208ENST00000471494 FXYD2P54710 66 aa12.49□□□□□ -0.41
RNF220-208ENST00000471494 NDUFV3P56181 108 aaKnown RBP12.49□□□□□ -0.41
RNF220-208ENST00000471494 KRTAP19-2Q3LHN2 52 aa12.49□□□□□ -0.41
RNF220-208ENST00000471494 LST1O00453 97 aa12.48□□□□□ -0.41
RNF220-208ENST00000471494 GHRHP01286 108 aa12.48□□□□□ -0.41
RNF220-208ENST00000471494 A0A1B0GX51 115 aa12.47□□□□□ -0.41
RNF220-208ENST00000471494 SS18L2Q9UHA2 77 aa12.47□□□□□ -0.41
RNF220-208ENST00000471494 Q6Q795 121 aa12.45□□□□□ -0.42
RNF220-208ENST00000471494 TEN1Q86WV5 123 aa12.44□□□□□ -0.42
RNF220-208ENST00000471494 OBSCN-AS1Q96MR7 158 aa12.44□□□□□ -0.42
RNF220-208ENST00000471494 TRIAP1O43715 76 aa12.43□□□□□ -0.42
RNF220-208ENST00000471494 FABP2P12104 132 aa12.43□□□□□ -0.42
RNF220-208ENST00000471494 PYY3Q5JQD4 70 aa12.43□□□□□ -0.42
RNF220-208ENST00000471494 H3BMG7 143 aa12.42□□□□□ -0.42
RNF220-208ENST00000471494 HSD52Q0P140 79 aa12.41□□□□□ -0.42
RNF220-208ENST00000471494 MT1HP80294 61 aa12.39□□□□□ -0.43
RNF220-208ENST00000471494 A0A087WSZ3 146 aa12.37□□□□□ -0.43
RNF220-208ENST00000471494 DNAL4O96015 105 aa12.36□□□□□ -0.43
RNF220-208ENST00000471494 PSMB2P49721 201 aa12.36□□□□□ -0.43
RNF220-208ENST00000471494 Q75L30 129 aa12.36□□□□□ -0.43
RNF220-208ENST00000471494 K7ERJ3 54 aa12.35□□□□□ -0.43
RNF220-208ENST00000471494 ATP11AUNQ6ZP68 121 aa12.34□□□□□ -0.43
RNF220-208ENST00000471494 COX6B2Q6YFQ2 88 aa12.33□□□□□ -0.44
RNF220-208ENST00000471494 Q96NJ1 140 aa12.32□□□□□ -0.44
RNF220-208ENST00000471494 ORMDL1Q9P0S3 153 aa12.32□□□□□ -0.44
RNF220-208ENST00000471494 TMA7Q9Y2S6 64 aaKnown RBP12.32□□□□□ -0.44
RNF220-208ENST00000471494 COX6CP09669 75 aa12.31□□□□□ -0.44
RNF220-208ENST00000471494 H3BQ85 93 aa12.3□□□□□ -0.44
RNF220-208ENST00000471494 UQCR10Q9UDW1 63 aa12.3□□□□□ -0.44
RNF220-208ENST00000471494 A0A1W2PNM2 257 aa12.28□□□□□ -0.44
RNF220-208ENST00000471494 KRTAP9-6A0A140TA67 174 aa12.27□□□□□ -0.45
RNF220-208ENST00000471494 LCE2DQ5TA82 110 aaPredicted RBP12.27□□□□□ -0.45
RNF220-208ENST00000471494 A0A1B0GV72 72 aa12.26□□□□□ -0.45
RNF220-208ENST00000471494 ANKRD29Q8N6D5 301 aa12.26□□□□□ -0.45
RNF220-208ENST00000471494 TMEM256-PLSCR3K7ERE1 68 aa12.24□□□□□ -0.45
RNF220-208ENST00000471494 SIGMAR1Q99720 223 aa12.24□□□□□ -0.45
RNF220-208ENST00000471494 TRBV7-4A0A0J9YYF1 115 aa12.22□□□□□ -0.45
RNF220-208ENST00000471494 M0R2T5 61 aa12.22□□□□□ -0.45
RNF220-208ENST00000471494 C20orf166-AS1Q96NR2 134 aa12.22□□□□□ -0.45
RNF220-208ENST00000471494 A8MUU9 505 aa12.19□□□□□ -0.46
RNF220-208ENST00000471494 DSCR10P59022 87 aa12.18□□□□□ -0.46
RNF220-208ENST00000471494 KRTAP10-6P60371 365 aaPredicted RBP12.16□□□□□ -0.46
RNF220-208ENST00000471494 UBE2V1Q13404 147 aa12.16□□□□□ -0.46
RNF220-208ENST00000471494 TRACP01848 142 aa12.15□□□□□ -0.46
RNF220-208ENST00000471494 CCKP06307 115 aa12.15□□□□□ -0.46
RNF220-208ENST00000471494 IGKV4-1P06312 121 aa12.15□□□□□ -0.46
RNF220-208ENST00000471494 SCGB1C2P0DMR2 95 aa12.15□□□□□ -0.46
RNF220-208ENST00000471494 LORP23490 312 aaPredicted RBP12.14□□□□□ -0.47
RNF220-208ENST00000471494 LINC00313P59037 77 aa12.11□□□□□ -0.47
RNF220-208ENST00000471494 FLGP20930 4061 aaPredicted RBP12.07□□□□□ -0.48
RNF220-208ENST00000471494 VPS25Q9BRG1 176 aa12.07□□□□□ -0.48
RNF220-208ENST00000471494 DEFB116Q30KQ4 102 aa12.06□□□□□ -0.48
RNF220-208ENST00000471494 LINC00472Q9H8W2 130 aa12.06□□□□□ -0.48
RNF220-208ENST00000471494 RBM3P98179 157 aaKnown RBP12.05□□□□□ -0.48
RNF220-208ENST00000471494 DSCR8Q96T75 97 aa12.04□□□□□ -0.48
RNF220-208ENST00000471494 TRBV20-1A0A075B6N2 111 aa12.02□□□□□ -0.49
RNF220-208ENST00000471494 KRTAP16-1A8MUX0 517 aa12.02□□□□□ -0.49
RNF220-208ENST00000471494 FSIP2Q5CZC0 6907 aa12.01□□□□□ -0.49
RNF220-208ENST00000471494 IGHV6-1A0A0B4J1U7 121 aa12□□□□□ -0.49
RNF220-208ENST00000471494 M0R143 59 aa12□□□□□ -0.49
RNF220-208ENST00000471494 BAALC-AS2P0C853 105 aa12□□□□□ -0.49
RNF220-208ENST00000471494 NOTCH2NLQ7Z3S9 236 aa11.99□□□□□ -0.49
RNF220-208ENST00000471494 CRCT1Q9UGL9 99 aa11.99□□□□□ -0.49
RNF220-208ENST00000471494 C9JAW5 83 aa11.96□□□□□ -0.49
RNF220-208ENST00000471494 C21orf62-AS1Q17RA5 79 aa11.95□□□□□ -0.5
RNF220-208ENST00000471494 A0A1B0GVX0 72 aa11.93□□□□□ -0.5
RNF220-208ENST00000471494 ATXN8Q156A1 80 aa11.93□□□□□ -0.5
RNF220-208ENST00000471494 NAA38Q9BRA0 125 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 334.1 ms