RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 IGLV5-48A0A075B6I7 105 aa8.4□□□□□ -1.06
COL1A1-203ENST00000471344 C9orf92A6NGG3 77 aa8.4□□□□□ -1.06
COL1A1-203ENST00000471344 PRO1933Q9H354 126 aa8.4□□□□□ -1.06
COL1A1-203ENST00000471344 CEND1Q8N111 149 aa8.39□□□□□ -1.07
COL1A1-203ENST00000471344 NHP2Q9NX24 153 aaKnown RBP8.39□□□□□ -1.07
COL1A1-203ENST00000471344 A0A0B4J2C4 111 aa8.35□□□□□ -1.07
COL1A1-203ENST00000471344 Q5XG85 94 aa8.35□□□□□ -1.07
COL1A1-203ENST00000471344 LOC105371267A0A1B0GV96 52 aa8.34□□□□□ -1.07
COL1A1-203ENST00000471344 VAMP3Q15836 100 aa8.34□□□□□ -1.07
COL1A1-203ENST00000471344 PCOTHQ58A44 107 aa8.34□□□□□ -1.07
COL1A1-203ENST00000471344 LINC00575Q6W349 94 aa8.34□□□□□ -1.07
COL1A1-203ENST00000471344 RAB37Q96AX2 223 aa8.34□□□□□ -1.07
COL1A1-203ENST00000471344 UQCR10Q9UDW1 63 aa8.34□□□□□ -1.07
COL1A1-203ENST00000471344 K7ERJ3 54 aa8.33□□□□□ -1.08
COL1A1-203ENST00000471344 HSD52Q0P140 79 aa8.33□□□□□ -1.08
COL1A1-203ENST00000471344 LCE2CQ5TA81 110 aa8.33□□□□□ -1.08
COL1A1-203ENST00000471344 C1orf195Q5TG92 126 aa8.33□□□□□ -1.08
COL1A1-203ENST00000471344 KRTAP19-2Q3LHN2 52 aa8.32□□□□□ -1.08
COL1A1-203ENST00000471344 FAM218AQ96MZ4 157 aa8.31□□□□□ -1.08
COL1A1-203ENST00000471344 hADV29S1A0JD25 119 aa8.29□□□□□ -1.08
COL1A1-203ENST00000471344 Q6ZQY7 126 aa8.29□□□□□ -1.08
COL1A1-203ENST00000471344 PRO1854Q9UHT4 67 aa8.29□□□□□ -1.08
COL1A1-203ENST00000471344 IGLV8-61A0A075B6I0 122 aa8.28□□□□□ -1.08
COL1A1-203ENST00000471344 SMIM6P0DI80 62 aa8.28□□□□□ -1.08
COL1A1-203ENST00000471344 TMEM238LA0A1B0GVL6 79 aa8.27□□□□□ -1.09
COL1A1-203ENST00000471344 A6NJY4 79 aa8.27□□□□□ -1.09
COL1A1-203ENST00000471344 F8WEM9 126 aa8.26□□□□□ -1.09
COL1A1-203ENST00000471344 TRIAP1O43715 76 aa8.26□□□□□ -1.09
COL1A1-203ENST00000471344 BVES-AS1Q5T3Y7 98 aa8.26□□□□□ -1.09
COL1A1-203ENST00000471344 TCL1BO95988 128 aa8.23□□□□□ -1.09
COL1A1-203ENST00000471344 Q6JHZ5 121 aa8.23□□□□□ -1.09
COL1A1-203ENST00000471344 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.23□□□□□ -1.09
COL1A1-203ENST00000471344 KRTAP9-6A0A140TA67 174 aa8.22□□□□□ -1.09
COL1A1-203ENST00000471344 PPDPFLQ8WWR9 84 aa8.22□□□□□ -1.09
COL1A1-203ENST00000471344 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
COL1A1-203ENST00000471344 MT1HP80294 61 aa8.21□□□□□ -1.1
COL1A1-203ENST00000471344 IGFL1Q6UW32 110 aa8.21□□□□□ -1.1
COL1A1-203ENST00000471344 RPL37P61927 97 aaKnown RBP8.2□□□□□ -1.1
COL1A1-203ENST00000471344 H0YGX0 51 aa8.19□□□□□ -1.1
COL1A1-203ENST00000471344 OCIAD2Q56VL3 154 aa8.19□□□□□ -1.1
COL1A1-203ENST00000471344 TRBV7-7A0A0K0K1E9 115 aa8.17□□□□□ -1.1
COL1A1-203ENST00000471344 H3BUT2 72 aa8.16□□□□□ -1.1
COL1A1-203ENST00000471344 PSMB2P49721 201 aa8.16□□□□□ -1.1
COL1A1-203ENST00000471344 FLGP20930 4061 aaPredicted RBP8.15□□□□□ -1.1
COL1A1-203ENST00000471344 LCE2DQ5TA82 110 aaPredicted RBP8.15□□□□□ -1.1
COL1A1-203ENST00000471344 SNHG12Q9BXW3 62 aa8.15□□□□□ -1.1
COL1A1-203ENST00000471344 NAA38Q9BRA0 125 aaKnown RBP8.14□□□□□ -1.11
COL1A1-203ENST00000471344 SNCGO76070 127 aa8.13□□□□□ -1.11
COL1A1-203ENST00000471344 A0A1B0GX51 115 aa8.1□□□□□ -1.11
COL1A1-203ENST00000471344 TSTD3H0UI37 97 aa8.1□□□□□ -1.11
COL1A1-203ENST00000471344 M0R143 59 aa8.1□□□□□ -1.11
COL1A1-203ENST00000471344 OBSCN-AS1Q96MR7 158 aa8.1□□□□□ -1.11
COL1A1-203ENST00000471344 NDUFV3P56181 108 aaKnown RBP8.09□□□□□ -1.11
COL1A1-203ENST00000471344 Q6Q795 121 aa8.08□□□□□ -1.12
COL1A1-203ENST00000471344 FSIP2Q5CZC0 6907 aa8.07□□□□□ -1.12
COL1A1-203ENST00000471344 A0A1B0GV72 72 aa8.07□□□□□ -1.12
COL1A1-203ENST00000471344 GHRHP01286 108 aa8.07□□□□□ -1.12
COL1A1-203ENST00000471344 FABP2P12104 132 aa8.07□□□□□ -1.12
COL1A1-203ENST00000471344 BATFQ16520 125 aa8.07□□□□□ -1.12
COL1A1-203ENST00000471344 LST1O00453 97 aa8.06□□□□□ -1.12
COL1A1-203ENST00000471344 COX6CP09669 75 aa8.06□□□□□ -1.12
COL1A1-203ENST00000471344 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
COL1A1-203ENST00000471344 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
COL1A1-203ENST00000471344 DNAL4O96015 105 aa8.04□□□□□ -1.12
COL1A1-203ENST00000471344 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
COL1A1-203ENST00000471344 TEN1Q86WV5 123 aa8.04□□□□□ -1.12
COL1A1-203ENST00000471344 ORMDL1Q9P0S3 153 aa8.04□□□□□ -1.12
COL1A1-203ENST00000471344 SS18L2Q9UHA2 77 aa8.04□□□□□ -1.12
COL1A1-203ENST00000471344 H3BMG7 143 aa8.03□□□□□ -1.12
COL1A1-203ENST00000471344 COX6B2Q6YFQ2 88 aa8.03□□□□□ -1.12
COL1A1-203ENST00000471344 TRACP01848 142 aa8.02□□□□□ -1.13
COL1A1-203ENST00000471344 Q75L30 129 aa8.02□□□□□ -1.13
COL1A1-203ENST00000471344 A0A1W2PNM2 257 aa8□□□□□ -1.13
COL1A1-203ENST00000471344 M0R2T5 61 aa8□□□□□ -1.13
COL1A1-203ENST00000471344 CRCT1Q9UGL9 99 aa8□□□□□ -1.13
COL1A1-203ENST00000471344 A0A087WSZ3 146 aa7.99□□□□□ -1.13
COL1A1-203ENST00000471344 Q96NJ1 140 aa7.99□□□□□ -1.13
COL1A1-203ENST00000471344 TAX1BP3O14907 124 aa7.97□□□□□ -1.13
COL1A1-203ENST00000471344 ATP11AUNQ6ZP68 121 aa7.97□□□□□ -1.13
COL1A1-203ENST00000471344 H3BQ85 93 aa7.96□□□□□ -1.14
COL1A1-203ENST00000471344 TMEM256-PLSCR3K7ERE1 68 aa7.96□□□□□ -1.14
COL1A1-203ENST00000471344 UBE2V1Q13404 147 aa7.95□□□□□ -1.14
COL1A1-203ENST00000471344 BAALC-AS2P0C853 105 aa7.94□□□□□ -1.14
COL1A1-203ENST00000471344 DSCR10P59022 87 aa7.93□□□□□ -1.14
COL1A1-203ENST00000471344 ATXN8Q156A1 80 aa7.93□□□□□ -1.14
COL1A1-203ENST00000471344 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
COL1A1-203ENST00000471344 C9orf118A6NHY6 69 aa7.92□□□□□ -1.14
COL1A1-203ENST00000471344 A8MUU9 505 aa7.92□□□□□ -1.14
COL1A1-203ENST00000471344 ANKRD29Q8N6D5 301 aa7.92□□□□□ -1.14
COL1A1-203ENST00000471344 TRBV7-4A0A0J9YYF1 115 aa7.9□□□□□ -1.14
COL1A1-203ENST00000471344 SIGMAR1Q99720 223 aa7.9□□□□□ -1.14
COL1A1-203ENST00000471344 A0A1W2PPM0 123 aa7.89□□□□□ -1.15
COL1A1-203ENST00000471344 CCKP06307 115 aa7.88□□□□□ -1.15
COL1A1-203ENST00000471344 MTURNQ8N3F0 131 aa7.88□□□□□ -1.15
COL1A1-203ENST00000471344 C9JAW5 83 aa7.87□□□□□ -1.15
COL1A1-203ENST00000471344 RBM3P98179 157 aaKnown RBP7.86□□□□□ -1.15
COL1A1-203ENST00000471344 DEFB116Q30KQ4 102 aa7.85□□□□□ -1.15
COL1A1-203ENST00000471344 NOTCH2NLQ7Z3S9 236 aa7.85□□□□□ -1.15
COL1A1-203ENST00000471344 VPS25Q9BRG1 176 aa7.85□□□□□ -1.15
COL1A1-203ENST00000471344 TRBV20-1A0A075B6N2 111 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms