RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 DNAH10Q8IVF4 4471 aa2.74□□□□□ -1.97
CCDC39-202ENST00000471307 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 SACSQ9NZJ4 4579 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 LOC107984640A0A0U1RRK4 108 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 M0R143 59 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 HSD52Q0P140 79 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 MUSTN1Q8IVN3 82 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 LINC00308Q8TCZ7 52 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 LINC00474Q9P2X8 69 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 FRAS1Q86XX4 4008 aa2.73□□□□□ -1.97
CCDC39-202ENST00000471307 DNAH17Q9UFH2 4485 aa2.72□□□□□ -1.97
CCDC39-202ENST00000471307 C16orf90A8MZG2 172 aa2.72□□□□□ -1.97
CCDC39-202ENST00000471307 NDUFC2O95298 119 aa2.72□□□□□ -1.97
CCDC39-202ENST00000471307 SDIM1Q6ZPB5 146 aa2.72□□□□□ -1.97
CCDC39-202ENST00000471307 C3orf22Q8N5N4 141 aa2.72□□□□□ -1.97
CCDC39-202ENST00000471307 DAND5Q8N907 189 aa2.72□□□□□ -1.97
CCDC39-202ENST00000471307 HECTD4Q9Y4D8 3996 aa2.72□□□□□ -1.97
CCDC39-202ENST00000471307 A0A1B0GV72 72 aa2.71□□□□□ -1.98
CCDC39-202ENST00000471307 A0A1B0GW54 56 aa2.71□□□□□ -1.98
CCDC39-202ENST00000471307 BVES-AS1Q5T3Y7 98 aa2.71□□□□□ -1.98
CCDC39-202ENST00000471307 SOSTDC1Q6X4U4 206 aa2.71□□□□□ -1.98
CCDC39-202ENST00000471307 KMT2CQ8NEZ4 4911 aaKnown RBP2.7□□□□□ -1.98
CCDC39-202ENST00000471307 TRBV10-2A0A0K0K1G8 114 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 A6NED7 52 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 HINT1P49773 126 aaPredicted RBP2.7□□□□□ -1.98
CCDC39-202ENST00000471307 FXYD2P54710 66 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 NPC2P61916 151 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 SCXQ7RTU7 201 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 ANKRD29Q8N6D5 301 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 DPH3Q96FX2 82 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 XAGE1AQ9HD64 81 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 RYR2Q92736 4967 aa2.7□□□□□ -1.98
CCDC39-202ENST00000471307 A0A096LNI7 61 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 TRAV13-2A0A0B4J235 113 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 A0A0B4J2C4 111 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 M0R378 163 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 ST20-AS1Q8NBB2 130 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 OR13C6PQ8NH95 151 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 RAB37Q96AX2 223 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 SNHG12Q9BXW3 62 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 PRO1854Q9UHT4 67 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 FAT2Q9NYQ8 4349 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 PKD1P98161 4303 aa2.69□□□□□ -1.98
CCDC39-202ENST00000471307 IGKV2-24A0A0C4DH68 120 aa2.68□□□□□ -1.98
CCDC39-202ENST00000471307 SLC25A20O43772 301 aa2.68□□□□□ -1.98
CCDC39-202ENST00000471307 LINC00313P59037 77 aa2.68□□□□□ -1.98
CCDC39-202ENST00000471307 COL5A1-AS1Q5SY13 56 aa2.68□□□□□ -1.98
CCDC39-202ENST00000471307 S100A7L2Q5SY68 101 aa2.68□□□□□ -1.98
CCDC39-202ENST00000471307 SPACA4Q8TDM5 124 aa2.68□□□□□ -1.98
CCDC39-202ENST00000471307 TMEM126AQ9H061 195 aa2.68□□□□□ -1.98
CCDC39-202ENST00000471307 NHP2Q9NX24 153 aaKnown RBP2.68□□□□□ -1.98
CCDC39-202ENST00000471307 DNAH11Q96DT5 4516 aa2.68□□□□□ -1.98
CCDC39-202ENST00000471307 A0A1W2PNN7 141 aa2.67□□□□□ -1.98
CCDC39-202ENST00000471307 IGLV6-57P01721 117 aa2.67□□□□□ -1.98
CCDC39-202ENST00000471307 FUSP35637 526 aaKnown RBP eCLIP2.67□□□□□ -1.98
CCDC39-202ENST00000471307 Q6ZSA8 131 aa2.67□□□□□ -1.98
CCDC39-202ENST00000471307 Q8NDZ9 215 aa2.67□□□□□ -1.98
CCDC39-202ENST00000471307 PLAC8Q9NZF1 115 aa2.67□□□□□ -1.98
CCDC39-202ENST00000471307 C22orf24Q9Y442 160 aa2.67□□□□□ -1.98
CCDC39-202ENST00000471307 NCR3O14931 201 aa2.66□□□□□ -1.98
CCDC39-202ENST00000471307 RPL28P46779 137 aaKnown RBP2.66□□□□□ -1.98
CCDC39-202ENST00000471307 SPINT4Q6UDR6 99 aa2.66□□□□□ -1.98
CCDC39-202ENST00000471307 KCNQ1DNQ9H478 68 aa2.66□□□□□ -1.98
CCDC39-202ENST00000471307 TRBV7-6A0A0J9YX20 115 aa2.65□□□□□ -1.99
CCDC39-202ENST00000471307 TRBV10-3A0A0K0K1G6 114 aa2.65□□□□□ -1.99
CCDC39-202ENST00000471307 A8MWP4 228 aa2.65□□□□□ -1.99
CCDC39-202ENST00000471307 H0YGX0 51 aa2.65□□□□□ -1.99
CCDC39-202ENST00000471307 K7ERJ3 54 aa2.65□□□□□ -1.99
CCDC39-202ENST00000471307 TAX1BP3O14907 124 aa2.65□□□□□ -1.99
CCDC39-202ENST00000471307 COX6CP09669 75 aa2.65□□□□□ -1.99
CCDC39-202ENST00000471307 SMIM11BQ8TCY0 68 aa2.65□□□□□ -1.99
CCDC39-202ENST00000471307 PKHD1P08F94 4074 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 TRAV23DV6A0A075B6W5 121 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 H3BQ85 93 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 H7C2G1 150 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 ZNF73O43830 326 aaPredicted RBP2.64□□□□□ -1.99
CCDC39-202ENST00000471307 IGKV4-1P06312 121 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 UBE2BP63146 152 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 LYRM7Q5U5X0 104 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 PHF5AQ7RTV0 110 aaKnown RBP2.64□□□□□ -1.99
CCDC39-202ENST00000471307 KRTAP13-1Q8IUC0 172 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 RYR3Q15413 4870 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 DNAH5Q8TE73 4624 aa2.64□□□□□ -1.99
CCDC39-202ENST00000471307 DNAH8Q96JB1 4490 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 TRBV20-1A0A075B6N2 111 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 FAM236DA0A1B0GTK5 79 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 H3BUT2 72 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 SNCGO76070 127 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 INAFM2P0DMQ5 153 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 FAM236CP0DP71 79 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 FABP2P12104 132 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 SPRR1AP35321 89 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 DIRC1Q969H9 104 aa2.63□□□□□ -1.99
CCDC39-202ENST00000471307 ETDCA0A1B0GVM5 59 aa2.62□□□□□ -1.99
CCDC39-202ENST00000471307 A0A1B0GX51 115 aa2.62□□□□□ -1.99
CCDC39-202ENST00000471307 A0A1W2PPM0 123 aa2.62□□□□□ -1.99
CCDC39-202ENST00000471307 LST1O00453 97 aa2.62□□□□□ -1.99
CCDC39-202ENST00000471307 COX7BP24311 80 aa2.62□□□□□ -1.99
CCDC39-202ENST00000471307 ELOF1P60002 83 aaKnown RBP2.62□□□□□ -1.99
CCDC39-202ENST00000471307 BCE1O60756 84 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 417 ms