RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 TMEM191AQ9H0A3 160 aa2.63□□□□□ -1.99
CKS1B-204ENST00000471245 SYNE2Q8WXH0 6885 aaKnown RBP2.62□□□□□ -1.99
CKS1B-204ENST00000471245 TRAV7A0A075B6U4 112 aa2.62□□□□□ -1.99
CKS1B-204ENST00000471245 A0A1B0GUT8 65 aa2.62□□□□□ -1.99
CKS1B-204ENST00000471245 KANTRA0A1W2PQU2 76 aa2.62□□□□□ -1.99
CKS1B-204ENST00000471245 HIGD1CA8MV81 97 aa2.62□□□□□ -1.99
CKS1B-204ENST00000471245 NDUFA1O15239 70 aa2.62□□□□□ -1.99
CKS1B-204ENST00000471245 H3BT86 120 aa2.61□□□□□ -1.99
CKS1B-204ENST00000471245 SCGB1A1P11684 91 aa2.61□□□□□ -1.99
CKS1B-204ENST00000471245 FCER1GP30273 86 aa2.61□□□□□ -1.99
CKS1B-204ENST00000471245 KRTAP13-1Q8IUC0 172 aa2.61□□□□□ -1.99
CKS1B-204ENST00000471245 C20orf166-AS1Q96NR2 134 aa2.61□□□□□ -1.99
CKS1B-204ENST00000471245 NAT8Q9UHE5 227 aa2.61□□□□□ -1.99
CKS1B-204ENST00000471245 C22orf24Q9Y442 160 aa2.61□□□□□ -1.99
CKS1B-204ENST00000471245 MRPS36P82909 103 aaKnown RBP2.6□□□□□ -1.99
CKS1B-204ENST00000471245 SCGB3A1Q96QR1 104 aa2.6□□□□□ -1.99
CKS1B-204ENST00000471245 V9GYV3 84 aa2.6□□□□□ -1.99
CKS1B-204ENST00000471245 USH2AO75445 5202 aa2.6□□□□□ -1.99
CKS1B-204ENST00000471245 SSPOA2VEC9 5147 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -1.99
CKS1B-204ENST00000471245 TRBV30A0A0K0K1B3 111 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 M0R378 163 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 NUPR1O60356 82 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 BCE1O60756 84 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 FXYD2P54710 66 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 Q9BRP9 147 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 SMIM2Q9BVW6 85 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 OSTCQ9NRP0 149 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 SPANXA1Q9NS26 97 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 LAMTOR3Q9UHA4 124 aa2.59□□□□□ -1.99
CKS1B-204ENST00000471245 ZNF727A8MUV8 499 aa2.58□□□□□ -2
CKS1B-204ENST00000471245 H7C2G1 150 aa2.58□□□□□ -2
CKS1B-204ENST00000471245 TAX1BP3O14907 124 aa2.58□□□□□ -2
CKS1B-204ENST00000471245 HBBP68871 147 aa2.58□□□□□ -2
CKS1B-204ENST00000471245 S100A12P80511 92 aa2.58□□□□□ -2
CKS1B-204ENST00000471245 FP248Q71RG6 208 aaPredicted RBP2.58□□□□□ -2
CKS1B-204ENST00000471245 HIST3H2BBQ8N257 126 aa2.58□□□□□ -2
CKS1B-204ENST00000471245 C20orf78Q9BR46 151 aa2.58□□□□□ -2
CKS1B-204ENST00000471245 TRBV10-2A0A0K0K1G8 114 aa2.57□□□□□ -2
CKS1B-204ENST00000471245 D6R8Y8 96 aa2.57□□□□□ -2
CKS1B-204ENST00000471245 CKS2P33552 79 aa2.57□□□□□ -2
CKS1B-204ENST00000471245 AMELXQ99217 191 aa2.57□□□□□ -2
CKS1B-204ENST00000471245 SMIM7Q9BQ49 75 aa2.57□□□□□ -2
CKS1B-204ENST00000471245 FCGBPQ9Y6R7 5405 aaPredicted RBP2.56□□□□□ -2
CKS1B-204ENST00000471245 IGKV2D-26A0A0A0MRZ7 120 aa2.56□□□□□ -2
CKS1B-204ENST00000471245 SMIM27A0A1W2PRY6 76 aa2.56□□□□□ -2
CKS1B-204ENST00000471245 PPP1R17O96001 155 aa2.56□□□□□ -2
CKS1B-204ENST00000471245 RPS28P62857 69 aaKnown RBP2.56□□□□□ -2
CKS1B-204ENST00000471245 ALKAL2Q6UX46 152 aa2.56□□□□□ -2
CKS1B-204ENST00000471245 TMEM141Q96I45 108 aa2.56□□□□□ -2
CKS1B-204ENST00000471245 TOMM7Q9P0U1 55 aa2.56□□□□□ -2
CKS1B-204ENST00000471245 IGIPA6NJ69 53 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 M0R2T5 61 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 TCL1BO95988 128 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 PRLHP81277 87 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 MRPL54Q6P161 138 aaKnown RBP2.55□□□□□ -2
CKS1B-204ENST00000471245 Q8IZM0 81 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 TCTE3Q8IZS6 198 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 PRO2289Q9P1D8 64 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 CDKN2A-AS1Q9UH64 79 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 NAT8BQ9UHF3 227 aa2.55□□□□□ -2
CKS1B-204ENST00000471245 F8VRH5 84 aa2.54□□□□□ -2
CKS1B-204ENST00000471245 TRGC2P03986 189 aa2.54□□□□□ -2
CKS1B-204ENST00000471245 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
CKS1B-204ENST00000471245 TMEM126AQ9H061 195 aa2.54□□□□□ -2
CKS1B-204ENST00000471245 PPBPP02775 128 aa2.53□□□□□ -2
CKS1B-204ENST00000471245 CKS1BP61024 79 aa2.53□□□□□ -2
CKS1B-204ENST00000471245 ADIRFQ15847 76 aa2.53□□□□□ -2
CKS1B-204ENST00000471245 SPAG11AQ6PDA7 123 aa2.53□□□□□ -2
CKS1B-204ENST00000471245 PRR15Q8IV56 129 aa2.53□□□□□ -2
CKS1B-204ENST00000471245 PRELID3AQ96N28 172 aa2.53□□□□□ -2
CKS1B-204ENST00000471245 HIST1H2BLQ99880 126 aa2.53□□□□□ -2
CKS1B-204ENST00000471245 A0A1B0GVG6 124 aa2.52□□□□□ -2.01
CKS1B-204ENST00000471245 Q8N8P6 123 aa2.52□□□□□ -2.01
CKS1B-204ENST00000471245 ZCCHC13Q8WW36 166 aaKnown RBP2.52□□□□□ -2.01
CKS1B-204ENST00000471245 F8W036 122 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 SPINK8P0C7L1 97 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 ADCYAP1P18509 176 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 PCOTHQ58A44 107 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 COX7B2Q8TF08 81 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 SPRR4Q96PI1 79 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 C2orf88Q9BSF0 95 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 SPANXCQ9NY87 97 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 LAMTOR2Q9Y2Q5 125 aa2.51□□□□□ -2.01
CKS1B-204ENST00000471245 TMEM256-PLSCR3K7ERE1 68 aa2.5□□□□□ -2.01
CKS1B-204ENST00000471245 A0A1B0GX51 115 aa2.49□□□□□ -2.01
CKS1B-204ENST00000471245 S100A8P05109 93 aa2.49□□□□□ -2.01
CKS1B-204ENST00000471245 NDUFA5Q16718 116 aa2.49□□□□□ -2.01
CKS1B-204ENST00000471245 Q6ZQT0 140 aa2.49□□□□□ -2.01
CKS1B-204ENST00000471245 SPINK1P00995 79 aa2.48□□□□□ -2.01
CKS1B-204ENST00000471245 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
CKS1B-204ENST00000471245 CST9LQ9H4G1 147 aa2.48□□□□□ -2.01
CKS1B-204ENST00000471245 NHP2Q9NX24 153 aaKnown RBP2.48□□□□□ -2.01
CKS1B-204ENST00000471245 NDUFA12Q9UI09 145 aa2.48□□□□□ -2.01
CKS1B-204ENST00000471245 ERC2-IT1O76042 136 aa2.47□□□□□ -2.01
CKS1B-204ENST00000471245 SEC11AP67812 179 aa2.47□□□□□ -2.01
CKS1B-204ENST00000471245 COX6B2Q6YFQ2 88 aa2.47□□□□□ -2.01
CKS1B-204ENST00000471245 FAM19A2Q8N3H0 131 aa2.47□□□□□ -2.01
CKS1B-204ENST00000471245 ZNF625Q96I27 306 aaPredicted RBP2.47□□□□□ -2.01
CKS1B-204ENST00000471245 ERG28Q9UKR5 140 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms