RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 C1orf137Q5JT78 98 aa7.34□□□□□ -1.23
SRGAP3-204ENST00000470951 TLX1NBP0CAT3 122 aa7.32□□□□□ -1.24
SRGAP3-204ENST00000470951 CDC42SE1Q9NRR8 79 aa7.32□□□□□ -1.24
SRGAP3-204ENST00000470951 KRTAP4-16G5E9R7 235 aaPredicted RBP7.32□□□□□ -1.24
SRGAP3-204ENST00000470951 IGLV5-37A0A075B6J1 123 aa7.31□□□□□ -1.24
SRGAP3-204ENST00000470951 SPRR1AP35321 89 aa7.31□□□□□ -1.24
SRGAP3-204ENST00000470951 Q8N9P0 234 aaPredicted RBP7.31□□□□□ -1.24
SRGAP3-204ENST00000470951 DSCR10P59022 87 aa7.3□□□□□ -1.24
SRGAP3-204ENST00000470951 LOC101927531A0A1B0GV80 90 aa7.29□□□□□ -1.24
SRGAP3-204ENST00000470951 NDUFB1O75438 58 aa7.29□□□□□ -1.24
SRGAP3-204ENST00000470951 LINC01556Q5JQF7 62 aa7.29□□□□□ -1.24
SRGAP3-204ENST00000470951 Q9BRP9 147 aa7.29□□□□□ -1.24
SRGAP3-204ENST00000470951 IGLV1-50A0A075B6I6 118 aa7.29□□□□□ -1.24
SRGAP3-204ENST00000470951 TRRAPQ9Y4A5 3859 aa7.28□□□□□ -1.24
SRGAP3-204ENST00000470951 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.28□□□□□ -1.24
SRGAP3-204ENST00000470951 IGKV2D-24A0A075B6R9 120 aa7.27□□□□□ -1.25
SRGAP3-204ENST00000470951 VWFP04275 2813 aa7.27□□□□□ -1.25
SRGAP3-204ENST00000470951 K7EQZ3 153 aa7.27□□□□□ -1.25
SRGAP3-204ENST00000470951 CDK2AP2O75956 126 aa7.27□□□□□ -1.25
SRGAP3-204ENST00000470951 LINC01554Q52M75 96 aa7.27□□□□□ -1.25
SRGAP3-204ENST00000470951 H0Y9J4 135 aa7.26□□□□□ -1.25
SRGAP3-204ENST00000470951 MOBPQ13875 183 aa7.26□□□□□ -1.25
SRGAP3-204ENST00000470951 PRR15LQ9BU68 103 aa7.25□□□□□ -1.25
SRGAP3-204ENST00000470951 LINC00313P59037 77 aa7.24□□□□□ -1.25
SRGAP3-204ENST00000470951 ST20-AS1Q8NBB2 130 aa7.24□□□□□ -1.25
SRGAP3-204ENST00000470951 A6NED7 52 aa7.23□□□□□ -1.25
SRGAP3-204ENST00000470951 RPL37AP8A6NKH3 93 aa7.23□□□□□ -1.25
SRGAP3-204ENST00000470951 MP68P56378 58 aa7.23□□□□□ -1.25
SRGAP3-204ENST00000470951 PKD1L1Q8TDX9 2849 aa7.22□□□□□ -1.25
SRGAP3-204ENST00000470951 IGLV9-49A0A0B4J1Y8 123 aa7.21□□□□□ -1.26
SRGAP3-204ENST00000470951 H3BPC8 53 aa7.21□□□□□ -1.26
SRGAP3-204ENST00000470951 DNAH10OSP0CZ25 163 aa7.21□□□□□ -1.26
SRGAP3-204ENST00000470951 ANK2Q01484 3957 aa7.2□□□□□ -1.26
SRGAP3-204ENST00000470951 LINC00476Q8WZB0 136 aa7.2□□□□□ -1.26
SRGAP3-204ENST00000470951 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
SRGAP3-204ENST00000470951 B9D2Q9BPU9 175 aa7.19□□□□□ -1.26
SRGAP3-204ENST00000470951 IGLV8-61A0A075B6I0 122 aa7.18□□□□□ -1.26
SRGAP3-204ENST00000470951 FAM168BA1KXE4 195 aa7.18□□□□□ -1.26
SRGAP3-204ENST00000470951 DNHD1Q96M86 4753 aa7.18□□□□□ -1.26
SRGAP3-204ENST00000470951 REG3GQ6UW15 175 aa7.18□□□□□ -1.26
SRGAP3-204ENST00000470951 KRTAP7-1Q8IUC3 87 aa7.17□□□□□ -1.26
SRGAP3-204ENST00000470951 KRTAP21-3Q3LHN1 58 aa7.17□□□□□ -1.26
SRGAP3-204ENST00000470951 ASB16-AS1Q495Z4 193 aa7.17□□□□□ -1.26
SRGAP3-204ENST00000470951 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
SRGAP3-204ENST00000470951 LINC00208Q96KT6 92 aa7.17□□□□□ -1.26
SRGAP3-204ENST00000470951 MGAM2Q2M2H8 2515 aa7.16□□□□□ -1.26
SRGAP3-204ENST00000470951 KRTAP29-1A8MX34 341 aaPredicted RBP7.15□□□□□ -1.26
SRGAP3-204ENST00000470951 PRR4Q16378 134 aa7.15□□□□□ -1.26
SRGAP3-204ENST00000470951 A0A087X002 238 aa7.15□□□□□ -1.27
SRGAP3-204ENST00000470951 DEFB131BA0A096LNP1 70 aa7.15□□□□□ -1.27
SRGAP3-204ENST00000470951 WFDC13Q8IUB5 93 aa7.14□□□□□ -1.27
SRGAP3-204ENST00000470951 PLAC8Q9NZF1 115 aa7.13□□□□□ -1.27
SRGAP3-204ENST00000470951 NOTCH1P46531 2555 aa7.13□□□□□ -1.27
SRGAP3-204ENST00000470951 CMYA5Q8N3K9 4069 aa7.12□□□□□ -1.27
SRGAP3-204ENST00000470951 A0A087WSZ3 146 aa7.12□□□□□ -1.27
SRGAP3-204ENST00000470951 H0Y9P7 68 aa7.11□□□□□ -1.27
SRGAP3-204ENST00000470951 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
SRGAP3-204ENST00000470951 CASC2Q6XLA1 102 aa7.1□□□□□ -1.27
SRGAP3-204ENST00000470951 PRAC1Q96KF2 57 aa7.1□□□□□ -1.27
SRGAP3-204ENST00000470951 PRB2P02812 416 aaPredicted RBP7.1□□□□□ -1.27
SRGAP3-204ENST00000470951 LINC01558Q9Y6Z2 57 aa7.09□□□□□ -1.27
SRGAP3-204ENST00000470951 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.28
SRGAP3-204ENST00000470951 ZNF706Q9Y5V0 76 aaPredicted RBP7.08□□□□□ -1.28
SRGAP3-204ENST00000470951 A8MWP4 228 aa7.07□□□□□ -1.28
SRGAP3-204ENST00000470951 CASC10Q5T4H9 136 aa7.07□□□□□ -1.28
SRGAP3-204ENST00000470951 C9orf163Q8N9P6 203 aa7.07□□□□□ -1.28
SRGAP3-204ENST00000470951 A0A0G2JQZ4 141 aa7.06□□□□□ -1.28
SRGAP3-204ENST00000470951 A0A1W2PNN7 141 aa7.06□□□□□ -1.28
SRGAP3-204ENST00000470951 SPRR1BP22528 89 aa7.06□□□□□ -1.28
SRGAP3-204ENST00000470951 CNBPP62633 177 aaKnown RBP7.06□□□□□ -1.28
SRGAP3-204ENST00000470951 RPL37AP61513 92 aaKnown RBP7.05□□□□□ -1.28
SRGAP3-204ENST00000470951 IGHV6-1A0A0B4J1U7 121 aa7.05□□□□□ -1.28
SRGAP3-204ENST00000470951 KRTAP10-11P60412 298 aa7.05□□□□□ -1.28
SRGAP3-204ENST00000470951 LINC00472Q9H8W2 130 aa7.05□□□□□ -1.28
SRGAP3-204ENST00000470951 PRLHP81277 87 aa7.04□□□□□ -1.28
SRGAP3-204ENST00000470951 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.28
SRGAP3-204ENST00000470951 KRTAP3-3Q9BYR6 98 aa7.02□□□□□ -1.29
SRGAP3-204ENST00000470951 KRTAP3-2Q9BYR7 98 aa7.02□□□□□ -1.29
SRGAP3-204ENST00000470951 COA5Q86WW8 74 aa7.01□□□□□ -1.29
SRGAP3-204ENST00000470951 A0A096LNI7 61 aa7□□□□□ -1.29
SRGAP3-204ENST00000470951 SPINK7P58062 85 aa7□□□□□ -1.29
SRGAP3-204ENST00000470951 ADM2Q7Z4H4 148 aa7□□□□□ -1.29
SRGAP3-204ENST00000470951 MMP24-AS1A0A0U1RRL7 71 aa6.99□□□□□ -1.29
SRGAP3-204ENST00000470951 TP53AIP1Q9HCN2 124 aa6.99□□□□□ -1.29
SRGAP3-204ENST00000470951 RTL8CO15255 209 aa6.98□□□□□ -1.29
SRGAP3-204ENST00000470951 RETNLBQ9BQ08 111 aa6.96□□□□□ -1.29
SRGAP3-204ENST00000470951 MEGF8Q7Z7M0 2845 aa6.96□□□□□ -1.3
SRGAP3-204ENST00000470951 DNAH3Q8TD57 4116 aa6.96□□□□□ -1.3
SRGAP3-204ENST00000470951 IGKV2-24A0A0C4DH68 120 aa6.96□□□□□ -1.3
SRGAP3-204ENST00000470951 NOTCH2NLQ7Z3S9 236 aa6.96□□□□□ -1.3
SRGAP3-204ENST00000470951 TENM3Q9P273 2699 aa6.94□□□□□ -1.3
SRGAP3-204ENST00000470951 C14orf177Q52M58 125 aa6.93□□□□□ -1.3
SRGAP3-204ENST00000470951 Q6ZR54 194 aa6.93□□□□□ -1.3
SRGAP3-204ENST00000470951 DNAH1Q9P2D7 4330 aa6.91□□□□□ -1.3
SRGAP3-204ENST00000470951 K7EIL1 84 aa6.91□□□□□ -1.3
SRGAP3-204ENST00000470951 FBN3Q75N90 2809 aa6.91□□□□□ -1.3
SRGAP3-204ENST00000470951 KRTAP11-1Q8IUC1 163 aa6.89□□□□□ -1.31
SRGAP3-204ENST00000470951 PRKDCP78527 4128 aaKnown RBP6.89□□□□□ -1.31
SRGAP3-204ENST00000470951 SPAG11AQ6PDA7 123 aa6.89□□□□□ -1.31
SRGAP3-204ENST00000470951 Q96NJ1 140 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms