RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 DNAH3Q8TD57 4116 aa8.8□□□□□ -1
NPHP4-207ENST00000470763 B9D2Q9BPU9 175 aa8.8□□□□□ -1
NPHP4-207ENST00000470763 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
NPHP4-207ENST00000470763 MP68P56378 58 aa8.79□□□□□ -1
NPHP4-207ENST00000470763 RPL37AP61513 92 aaKnown RBP8.79□□□□□ -1
NPHP4-207ENST00000470763 LINC00476Q8WZB0 136 aa8.79□□□□□ -1
NPHP4-207ENST00000470763 NDUFB1O75438 58 aa8.79□□□□□ -1
NPHP4-207ENST00000470763 RETNQ9HD89 108 aa8.79□□□□□ -1
NPHP4-207ENST00000470763 CHKB-CPT1BH3BT56 60 aa8.77□□□□□ -1
NPHP4-207ENST00000470763 KRTAP7-1Q8IUC3 87 aa8.76□□□□□ -1.01
NPHP4-207ENST00000470763 A0A087WSZ3 146 aa8.75□□□□□ -1.01
NPHP4-207ENST00000470763 SPRR1AP35321 89 aa8.75□□□□□ -1.01
NPHP4-207ENST00000470763 TENM3Q9P273 2699 aa8.75□□□□□ -1.01
NPHP4-207ENST00000470763 IGFL1Q6UW32 110 aa8.75□□□□□ -1.01
NPHP4-207ENST00000470763 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
NPHP4-207ENST00000470763 PRR15LQ9BU68 103 aa8.75□□□□□ -1.01
NPHP4-207ENST00000470763 Q8N9P0 234 aaPredicted RBP8.73□□□□□ -1.01
NPHP4-207ENST00000470763 C16orf90A8MZG2 172 aa8.73□□□□□ -1.01
NPHP4-207ENST00000470763 H0Y9P7 68 aa8.73□□□□□ -1.01
NPHP4-207ENST00000470763 SRRM2Q9UQ35 2752 aaKnown RBP8.72□□□□□ -1.01
NPHP4-207ENST00000470763 CD164Q04900 197 aa8.72□□□□□ -1.01
NPHP4-207ENST00000470763 CASC10Q5T4H9 136 aa8.71□□□□□ -1.01
NPHP4-207ENST00000470763 MRPL55Q7Z7F7 128 aaKnown RBP8.71□□□□□ -1.02
NPHP4-207ENST00000470763 UBE2AP49459 152 aa8.71□□□□□ -1.02
NPHP4-207ENST00000470763 LINC01556Q5JQF7 62 aa8.69□□□□□ -1.02
NPHP4-207ENST00000470763 PLA2G2DQ9UNK4 145 aa8.69□□□□□ -1.02
NPHP4-207ENST00000470763 TLX1NBP0CAT3 122 aa8.68□□□□□ -1.02
NPHP4-207ENST00000470763 PRLHP81277 87 aa8.68□□□□□ -1.02
NPHP4-207ENST00000470763 CASC2Q6XLA1 102 aa8.68□□□□□ -1.02
NPHP4-207ENST00000470763 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
NPHP4-207ENST00000470763 LIMD2Q9BT23 127 aa8.67□□□□□ -1.02
NPHP4-207ENST00000470763 REG3GQ6UW15 175 aa8.67□□□□□ -1.02
NPHP4-207ENST00000470763 LINC00588Q9Y4M8 146 aa8.67□□□□□ -1.02
NPHP4-207ENST00000470763 COL7A1Q02388 2944 aa8.67□□□□□ -1.02
NPHP4-207ENST00000470763 IGLV5-37A0A075B6J1 123 aa8.66□□□□□ -1.02
NPHP4-207ENST00000470763 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
NPHP4-207ENST00000470763 LCA10Q71F78 164 aa8.66□□□□□ -1.02
NPHP4-207ENST00000470763 A6NED7 52 aa8.65□□□□□ -1.02
NPHP4-207ENST00000470763 H3BNG1 76 aa8.65□□□□□ -1.02
NPHP4-207ENST00000470763 SPANXA2-OT1Q8N9U9 137 aa8.65□□□□□ -1.02
NPHP4-207ENST00000470763 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
NPHP4-207ENST00000470763 KTN1-AS1Q86SY8 53 aa8.64□□□□□ -1.03
NPHP4-207ENST00000470763 RBM12B-AS1Q9P1G2 102 aa8.63□□□□□ -1.03
NPHP4-207ENST00000470763 COA5Q86WW8 74 aa8.62□□□□□ -1.03
NPHP4-207ENST00000470763 CSMD3Q7Z407 3707 aa8.62□□□□□ -1.03
NPHP4-207ENST00000470763 DEFB131BA0A096LNP1 70 aa8.61□□□□□ -1.03
NPHP4-207ENST00000470763 DNAH9Q9NYC9 4486 aa8.61□□□□□ -1.03
NPHP4-207ENST00000470763 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
NPHP4-207ENST00000470763 PCOTHQ58A44 107 aa8.59□□□□□ -1.03
NPHP4-207ENST00000470763 IGKV2-24A0A0C4DH68 120 aa8.59□□□□□ -1.04
NPHP4-207ENST00000470763 Q75L30 129 aa8.59□□□□□ -1.04
NPHP4-207ENST00000470763 A0A096LNI7 61 aa8.58□□□□□ -1.04
NPHP4-207ENST00000470763 H3BPC8 53 aa8.58□□□□□ -1.04
NPHP4-207ENST00000470763 DNAH10OSP0CZ25 163 aa8.57□□□□□ -1.04
NPHP4-207ENST00000470763 KRTAP10-11P60412 298 aa8.57□□□□□ -1.04
NPHP4-207ENST00000470763 H0Y9J4 135 aa8.57□□□□□ -1.04
NPHP4-207ENST00000470763 ATP11AUNQ6ZP68 121 aa8.57□□□□□ -1.04
NPHP4-207ENST00000470763 A8MWP4 228 aa8.56□□□□□ -1.04
NPHP4-207ENST00000470763 SPAG11AQ6PDA7 123 aa8.56□□□□□ -1.04
NPHP4-207ENST00000470763 IGLV8-61A0A075B6I0 122 aa8.55□□□□□ -1.04
NPHP4-207ENST00000470763 LOC101927531A0A1B0GV80 90 aa8.54□□□□□ -1.04
NPHP4-207ENST00000470763 A6NN06 94 aa8.54□□□□□ -1.04
NPHP4-207ENST00000470763 TENM2Q9NT68 2774 aa8.54□□□□□ -1.04
NPHP4-207ENST00000470763 K7EIL1 84 aa8.53□□□□□ -1.04
NPHP4-207ENST00000470763 C11orf45Q8TAV5 145 aa8.53□□□□□ -1.04
NPHP4-207ENST00000470763 LINC00472Q9H8W2 130 aa8.53□□□□□ -1.04
NPHP4-207ENST00000470763 IGLV7-46A0A075B6I9 117 aa8.53□□□□□ -1.04
NPHP4-207ENST00000470763 MMP24-AS1A0A0U1RRL7 71 aa8.51□□□□□ -1.05
NPHP4-207ENST00000470763 CDC42SE1Q9NRR8 79 aa8.51□□□□□ -1.05
NPHP4-207ENST00000470763 DNAH10Q8IVF4 4471 aa8.51□□□□□ -1.05
NPHP4-207ENST00000470763 DNAH1Q9P2D7 4330 aa8.5□□□□□ -1.05
NPHP4-207ENST00000470763 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
NPHP4-207ENST00000470763 NDUFS5O43920 106 aa8.48□□□□□ -1.05
NPHP4-207ENST00000470763 MOBPQ13875 183 aa8.48□□□□□ -1.05
NPHP4-207ENST00000470763 HUWE1Q7Z6Z7 4374 aaKnown RBP8.47□□□□□ -1.05
NPHP4-207ENST00000470763 KMT2CQ8NEZ4 4911 aaKnown RBP8.47□□□□□ -1.05
NPHP4-207ENST00000470763 STAB2Q8WWQ8 2551 aa8.47□□□□□ -1.05
NPHP4-207ENST00000470763 SPINK7P58062 85 aa8.47□□□□□ -1.05
NPHP4-207ENST00000470763 PHF5AQ7RTV0 110 aaKnown RBP8.47□□□□□ -1.05
NPHP4-207ENST00000470763 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
NPHP4-207ENST00000470763 CHTF8P0CG12 524 aa8.44□□□□□ -1.06
NPHP4-207ENST00000470763 DNAH7Q8WXX0 4024 aa8.43□□□□□ -1.06
NPHP4-207ENST00000470763 C7orf65Q6ZTY9 151 aa8.43□□□□□ -1.06
NPHP4-207ENST00000470763 LYSTQ99698 3801 aa8.42□□□□□ -1.06
NPHP4-207ENST00000470763 HRES1P13985 223 aa8.41□□□□□ -1.06
NPHP4-207ENST00000470763 PLAC8Q9NZF1 115 aa8.4□□□□□ -1.06
NPHP4-207ENST00000470763 SPRR1BP22528 89 aa8.38□□□□□ -1.07
NPHP4-207ENST00000470763 IGLV9-49A0A0B4J1Y8 123 aa8.37□□□□□ -1.07
NPHP4-207ENST00000470763 RYR3Q15413 4870 aa8.37□□□□□ -1.07
NPHP4-207ENST00000470763 IGHV6-1A0A0B4J1U7 121 aa8.36□□□□□ -1.07
NPHP4-207ENST00000470763 Q96NJ1 140 aa8.36□□□□□ -1.07
NPHP4-207ENST00000470763 TP53AIP1Q9HCN2 124 aa8.36□□□□□ -1.07
NPHP4-207ENST00000470763 C8orf17Q9NRJ1 99 aa8.36□□□□□ -1.07
NPHP4-207ENST00000470763 Q6ZR54 194 aa8.34□□□□□ -1.07
NPHP4-207ENST00000470763 PRR26Q8N8Z3 221 aa8.34□□□□□ -1.07
NPHP4-207ENST00000470763 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
NPHP4-207ENST00000470763 ASB16-AS1Q495Z4 193 aa8.33□□□□□ -1.08
NPHP4-207ENST00000470763 PRAC1Q96KF2 57 aa8.32□□□□□ -1.08
NPHP4-207ENST00000470763 STARD9Q9P2P6 4700 aa8.3□□□□□ -1.08
NPHP4-207ENST00000470763 WWC2-AS2Q96NR7 200 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms