RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 C12orf57Q99622 126 aa7.09□□□□□ -1.27
CPSF4-210ENST00000469897 NHP2Q9NX24 153 aaKnown RBP7.09□□□□□ -1.27
CPSF4-210ENST00000469897 RPL37P61927 97 aaKnown RBP7.08□□□□□ -1.28
CPSF4-210ENST00000469897 TCL1BO95988 128 aa7.07□□□□□ -1.28
CPSF4-210ENST00000469897 CFC1BP0CG36 223 aa7.07□□□□□ -1.28
CPSF4-210ENST00000469897 VAMP3Q15836 100 aa7.06□□□□□ -1.28
CPSF4-210ENST00000469897 PYY3Q5JQD4 70 aa7.06□□□□□ -1.28
CPSF4-210ENST00000469897 F8WEM9 126 aa7.04□□□□□ -1.28
CPSF4-210ENST00000469897 M0R2T5 61 aa7.04□□□□□ -1.28
CPSF4-210ENST00000469897 LORP23490 312 aaPredicted RBP7.04□□□□□ -1.28
CPSF4-210ENST00000469897 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
CPSF4-210ENST00000469897 LINC00575Q6W349 94 aa7.04□□□□□ -1.28
CPSF4-210ENST00000469897 hADV29S1A0JD25 119 aa7.02□□□□□ -1.29
CPSF4-210ENST00000469897 COX6B2Q6YFQ2 88 aa7.02□□□□□ -1.29
CPSF4-210ENST00000469897 Q6ZQY7 126 aa7.02□□□□□ -1.29
CPSF4-210ENST00000469897 OCIAD2Q56VL3 154 aa7□□□□□ -1.29
CPSF4-210ENST00000469897 Q6JHZ5 121 aa6.99□□□□□ -1.29
CPSF4-210ENST00000469897 IGFL1Q6UW32 110 aa6.99□□□□□ -1.29
CPSF4-210ENST00000469897 TRBV7-7A0A0K0K1E9 115 aa6.98□□□□□ -1.29
CPSF4-210ENST00000469897 HSBP1L1C9JCN9 74 aa6.97□□□□□ -1.29
CPSF4-210ENST00000469897 CLEC2BQ92478 149 aa6.97□□□□□ -1.29
CPSF4-210ENST00000469897 OBSCN-AS1Q96MR7 158 aa6.96□□□□□ -1.3
CPSF4-210ENST00000469897 SNHG12Q9BXW3 62 aa6.96□□□□□ -1.3
CPSF4-210ENST00000469897 PCP4L1A6NKN8 68 aa6.95□□□□□ -1.3
CPSF4-210ENST00000469897 ATP11AUNQ6ZP68 121 aa6.95□□□□□ -1.3
CPSF4-210ENST00000469897 SCGB1D1O95968 90 aa6.94□□□□□ -1.3
CPSF4-210ENST00000469897 Q6Q795 121 aa6.94□□□□□ -1.3
CPSF4-210ENST00000469897 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.94□□□□□ -1.3
CPSF4-210ENST00000469897 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
CPSF4-210ENST00000469897 H3BUT2 72 aa6.92□□□□□ -1.3
CPSF4-210ENST00000469897 BVES-AS1Q5T3Y7 98 aa6.92□□□□□ -1.3
CPSF4-210ENST00000469897 LST1O00453 97 aa6.91□□□□□ -1.3
CPSF4-210ENST00000469897 Q75L30 129 aa6.91□□□□□ -1.3
CPSF4-210ENST00000469897 PPDPFLQ8WWR9 84 aa6.91□□□□□ -1.3
CPSF4-210ENST00000469897 Q96NJ1 140 aa6.9□□□□□ -1.3
CPSF4-210ENST00000469897 FLGP20930 4061 aaPredicted RBP6.89□□□□□ -1.31
CPSF4-210ENST00000469897 TSTD3H0UI37 97 aa6.87□□□□□ -1.31
CPSF4-210ENST00000469897 CFC1P0CG37 223 aa6.86□□□□□ -1.31
CPSF4-210ENST00000469897 COX8AP10176 69 aa6.86□□□□□ -1.31
CPSF4-210ENST00000469897 NDUFV3P56181 108 aaKnown RBP6.85□□□□□ -1.31
CPSF4-210ENST00000469897 VAMP8Q9BV40 100 aa6.85□□□□□ -1.31
CPSF4-210ENST00000469897 H0YGX0 51 aa6.83□□□□□ -1.32
CPSF4-210ENST00000469897 SNCGO76070 127 aa6.83□□□□□ -1.32
CPSF4-210ENST00000469897 TEN1Q86WV5 123 aa6.83□□□□□ -1.32
CPSF4-210ENST00000469897 RAB37Q96AX2 223 aa6.83□□□□□ -1.32
CPSF4-210ENST00000469897 C14orf144Q96I85 54 aa6.83□□□□□ -1.32
CPSF4-210ENST00000469897 FAM218AQ96MZ4 157 aa6.83□□□□□ -1.32
CPSF4-210ENST00000469897 SS18L2Q9UHA2 77 aa6.83□□□□□ -1.32
CPSF4-210ENST00000469897 PAM16Q9Y3D7 125 aa6.83□□□□□ -1.32
CPSF4-210ENST00000469897 DLEU1O43261 78 aa6.82□□□□□ -1.32
CPSF4-210ENST00000469897 SPATA45Q537H7 98 aa6.82□□□□□ -1.32
CPSF4-210ENST00000469897 C20orf166-AS1Q96NR2 134 aa6.82□□□□□ -1.32
CPSF4-210ENST00000469897 A0A087WSZ3 146 aa6.81□□□□□ -1.32
CPSF4-210ENST00000469897 A8MUU9 505 aa6.81□□□□□ -1.32
CPSF4-210ENST00000469897 H3BMG7 143 aa6.8□□□□□ -1.32
CPSF4-210ENST00000469897 FABP2P12104 132 aa6.79□□□□□ -1.32
CPSF4-210ENST00000469897 A0A0B4J2C4 111 aa6.78□□□□□ -1.32
CPSF4-210ENST00000469897 DSCR10P59022 87 aa6.78□□□□□ -1.32
CPSF4-210ENST00000469897 UQCR10Q9UDW1 63 aa6.78□□□□□ -1.32
CPSF4-210ENST00000469897 TRBV20-1A0A075B6N2 111 aa6.77□□□□□ -1.33
CPSF4-210ENST00000469897 HIGD1BQ9P298 99 aa6.77□□□□□ -1.33
CPSF4-210ENST00000469897 KRTAP9-8Q9BYQ0 159 aa6.76□□□□□ -1.33
CPSF4-210ENST00000469897 A0A1W2PNM2 257 aa6.75□□□□□ -1.33
CPSF4-210ENST00000469897 C2orf91Q6ZV80 131 aa6.75□□□□□ -1.33
CPSF4-210ENST00000469897 PRO1854Q9UHT4 67 aa6.75□□□□□ -1.33
CPSF4-210ENST00000469897 A0A1B0GX51 115 aa6.74□□□□□ -1.33
CPSF4-210ENST00000469897 KRTAP16-1A8MUX0 517 aa6.74□□□□□ -1.33
CPSF4-210ENST00000469897 GHRHP01286 108 aa6.74□□□□□ -1.33
CPSF4-210ENST00000469897 M0R143 59 aa6.73□□□□□ -1.33
CPSF4-210ENST00000469897 CEND1Q8N111 149 aa6.73□□□□□ -1.33
CPSF4-210ENST00000469897 LINC00313P59037 77 aa6.72□□□□□ -1.33
CPSF4-210ENST00000469897 SIGMAR1Q99720 223 aa6.72□□□□□ -1.33
CPSF4-210ENST00000469897 IGKV4-1P06312 121 aa6.71□□□□□ -1.34
CPSF4-210ENST00000469897 ANKRD29Q8N6D5 301 aa6.71□□□□□ -1.34
CPSF4-210ENST00000469897 A0A1B0GV72 72 aa6.7□□□□□ -1.34
CPSF4-210ENST00000469897 TRIAP1O43715 76 aa6.7□□□□□ -1.34
CPSF4-210ENST00000469897 DEFB116Q30KQ4 102 aa6.7□□□□□ -1.34
CPSF4-210ENST00000469897 FXYD2P54710 66 aa6.69□□□□□ -1.34
CPSF4-210ENST00000469897 NOTCH2NLQ7Z3S9 236 aa6.69□□□□□ -1.34
CPSF4-210ENST00000469897 TRBV7-4A0A0J9YYF1 115 aa6.68□□□□□ -1.34
CPSF4-210ENST00000469897 TMEM238LA0A1B0GVL6 79 aa6.68□□□□□ -1.34
CPSF4-210ENST00000469897 A6NJY4 79 aa6.68□□□□□ -1.34
CPSF4-210ENST00000469897 USH2AO75445 5202 aa6.67□□□□□ -1.34
CPSF4-210ENST00000469897 FAM236DA0A1B0GTK5 79 aa6.66□□□□□ -1.34
CPSF4-210ENST00000469897 FAM236CP0DP71 79 aa6.66□□□□□ -1.34
CPSF4-210ENST00000469897 DNAL4O96015 105 aa6.65□□□□□ -1.34
CPSF4-210ENST00000469897 PSMB2P49721 201 aa6.65□□□□□ -1.34
CPSF4-210ENST00000469897 ORMDL1Q9P0S3 153 aa6.65□□□□□ -1.34
CPSF4-210ENST00000469897 MT2AP02795 61 aa6.64□□□□□ -1.35
CPSF4-210ENST00000469897 LINC00472Q9H8W2 130 aa6.64□□□□□ -1.35
CPSF4-210ENST00000469897 IGHV6-1A0A0B4J1U7 121 aa6.63□□□□□ -1.35
CPSF4-210ENST00000469897 A0A1B0GV90 55 aa6.63□□□□□ -1.35
CPSF4-210ENST00000469897 TMEM256-PLSCR3K7ERE1 68 aa6.63□□□□□ -1.35
CPSF4-210ENST00000469897 HRES1P13985 223 aa6.63□□□□□ -1.35
CPSF4-210ENST00000469897 COL5A1-AS1Q5SY13 56 aa6.63□□□□□ -1.35
CPSF4-210ENST00000469897 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
CPSF4-210ENST00000469897 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.62□□□□□ -1.35
CPSF4-210ENST00000469897 H3BQ85 93 aa6.62□□□□□ -1.35
CPSF4-210ENST00000469897 K7ERJ3 54 aa6.62□□□□□ -1.35
CPSF4-210ENST00000469897 CCKP06307 115 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms