RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 Q75L30 129 aa9.94□□□□□ -0.82
BRAT1-204ENST00000469750 LAMA1P25391 3075 aa9.94□□□□□ -0.82
BRAT1-204ENST00000469750 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.92□□□□□ -0.82
BRAT1-204ENST00000469750 OCR1Q9BZK8 76 aa9.91□□□□□ -0.82
BRAT1-204ENST00000469750 FP248Q71RG6 208 aaPredicted RBP9.91□□□□□ -0.82
BRAT1-204ENST00000469750 IGSF10Q6WRI0 2623 aa9.89□□□□□ -0.83
BRAT1-204ENST00000469750 Q8N1X5 172 aa9.88□□□□□ -0.83
BRAT1-204ENST00000469750 CR1P17927 2039 aa9.87□□□□□ -0.83
BRAT1-204ENST00000469750 VCANP13611 3396 aa9.86□□□□□ -0.83
BRAT1-204ENST00000469750 FAM229BQ4G0N7 80 aa9.84□□□□□ -0.83
BRAT1-204ENST00000469750 PRR26Q8N8Z3 221 aa9.82□□□□□ -0.84
BRAT1-204ENST00000469750 STAB1Q9NY15 2570 aa9.81□□□□□ -0.84
BRAT1-204ENST00000469750 CYSTM1Q9H1C7 97 aa9.81□□□□□ -0.84
BRAT1-204ENST00000469750 PLAC8Q9NZF1 115 aa9.8□□□□□ -0.84
BRAT1-204ENST00000469750 MAP1AP78559 2803 aaPredicted RBP9.79□□□□□ -0.84
BRAT1-204ENST00000469750 LUZP6Q538Z0 58 aa9.78□□□□□ -0.84
BRAT1-204ENST00000469750 IGLV7-46A0A075B6I9 117 aa9.78□□□□□ -0.84
BRAT1-204ENST00000469750 PRAC1Q96KF2 57 aa9.78□□□□□ -0.84
BRAT1-204ENST00000469750 Q8N9P0 234 aaPredicted RBP9.78□□□□□ -0.84
BRAT1-204ENST00000469750 LINC01558Q9Y6Z2 57 aa9.77□□□□□ -0.85
BRAT1-204ENST00000469750 SPRR1AP35321 89 aa9.77□□□□□ -0.85
BRAT1-204ENST00000469750 Q6ZSA8 131 aa9.77□□□□□ -0.85
BRAT1-204ENST00000469750 TEP1Q99973 2627 aaKnown RBP9.77□□□□□ -0.85
BRAT1-204ENST00000469750 DNAH14Q0VDD8 3507 aa9.76□□□□□ -0.85
BRAT1-204ENST00000469750 EYSQ5T1H1 3165 aa9.76□□□□□ -0.85
BRAT1-204ENST00000469750 CHD6Q8TD26 2715 aa9.75□□□□□ -0.85
BRAT1-204ENST00000469750 CELSR3Q9NYQ7 3312 aa9.75□□□□□ -0.85
BRAT1-204ENST00000469750 Q8NDZ9 215 aa9.75□□□□□ -0.85
BRAT1-204ENST00000469750 Q5VV11 94 aa9.74□□□□□ -0.85
BRAT1-204ENST00000469750 A0A0D9SG42 100 aa9.73□□□□□ -0.85
BRAT1-204ENST00000469750 FRYLO94915 3013 aa9.72□□□□□ -0.85
BRAT1-204ENST00000469750 UNC79Q9P2D8 2635 aa9.72□□□□□ -0.85
BRAT1-204ENST00000469750 OXTP01178 125 aa9.71□□□□□ -0.85
BRAT1-204ENST00000469750 SPTBN5Q9NRC6 3674 aaKnown RBP9.7□□□□□ -0.86
BRAT1-204ENST00000469750 TEX15Q9BXT5 2789 aa9.7□□□□□ -0.86
BRAT1-204ENST00000469750 REV3LO60673 3130 aa9.69□□□□□ -0.86
BRAT1-204ENST00000469750 HRES1P13985 223 aa9.68□□□□□ -0.86
BRAT1-204ENST00000469750 MMP24-AS1A0A0U1RRL7 71 aa9.67□□□□□ -0.86
BRAT1-204ENST00000469750 SPRR1BP22528 89 aa9.66□□□□□ -0.86
BRAT1-204ENST00000469750 DMXL2Q8TDJ6 3036 aa9.66□□□□□ -0.86
BRAT1-204ENST00000469750 KRTAP1-5Q9BYS1 174 aa9.66□□□□□ -0.86
BRAT1-204ENST00000469750 SETXQ7Z333 2677 aaKnown RBP9.65□□□□□ -0.86
BRAT1-204ENST00000469750 CSAG1Q6PB30 78 aa9.65□□□□□ -0.86
BRAT1-204ENST00000469750 FRYQ5TBA9 3013 aa9.64□□□□□ -0.87
BRAT1-204ENST00000469750 FLNCQ14315 2725 aa9.64□□□□□ -0.87
BRAT1-204ENST00000469750 ZCCHC13Q8WW36 166 aaKnown RBP9.63□□□□□ -0.87
BRAT1-204ENST00000469750 COL6A5A8TX70 2615 aa9.63□□□□□ -0.87
BRAT1-204ENST00000469750 BOD1L1Q8NFC6 3051 aa9.62□□□□□ -0.87
BRAT1-204ENST00000469750 BAHCC1Q9P281 2608 aa9.62□□□□□ -0.87
BRAT1-204ENST00000469750 A0A0A0MQY5 61 aa9.61□□□□□ -0.87
BRAT1-204ENST00000469750 DMAC1Q96GE9 116 aa9.61□□□□□ -0.87
BRAT1-204ENST00000469750 KRTAP26-1Q6PEX3 210 aa9.61□□□□□ -0.87
BRAT1-204ENST00000469750 ATMQ13315 3056 aa9.59□□□□□ -0.87
BRAT1-204ENST00000469750 LINC00472Q9H8W2 130 aa9.58□□□□□ -0.88
BRAT1-204ENST00000469750 FREM2Q5SZK8 3169 aa9.56□□□□□ -0.88
BRAT1-204ENST00000469750 A0A1B0GU33 70 aa9.56□□□□□ -0.88
BRAT1-204ENST00000469750 SPINK7P58062 85 aa9.56□□□□□ -0.88
BRAT1-204ENST00000469750 NBEAL1Q6ZS30 2694 aa9.55□□□□□ -0.88
BRAT1-204ENST00000469750 DMXL1Q9Y485 3027 aa9.55□□□□□ -0.88
BRAT1-204ENST00000469750 COL12A1Q99715 3063 aa9.53□□□□□ -0.88
BRAT1-204ENST00000469750 NOTCH1P46531 2555 aa9.52□□□□□ -0.89
BRAT1-204ENST00000469750 Q5W150 140 aa9.51□□□□□ -0.89
BRAT1-204ENST00000469750 GCN1Q92616 2671 aaKnown RBP9.51□□□□□ -0.89
BRAT1-204ENST00000469750 ASB16-AS1Q495Z4 193 aa9.51□□□□□ -0.89
BRAT1-204ENST00000469750 LCE6AA0A183 80 aa9.51□□□□□ -0.89
BRAT1-204ENST00000469750 M0R2T5 61 aa9.51□□□□□ -0.89
BRAT1-204ENST00000469750 KRTAP10-1P60331 282 aa9.5□□□□□ -0.89
BRAT1-204ENST00000469750 CAMK2N1Q7Z7J9 78 aa9.5□□□□□ -0.89
BRAT1-204ENST00000469750 SPEGQ15772 3267 aa9.49□□□□□ -0.89
BRAT1-204ENST00000469750 KRTAP10-2P60368 255 aa9.47□□□□□ -0.89
BRAT1-204ENST00000469750 ADGRG4Q8IZF6 3080 aa9.47□□□□□ -0.89
BRAT1-204ENST00000469750 Q5VSD8 79 aa9.47□□□□□ -0.89
BRAT1-204ENST00000469750 S4R3F8 94 aa9.46□□□□□ -0.9
BRAT1-204ENST00000469750 LINC00483Q53H64 154 aa9.41□□□□□ -0.9
BRAT1-204ENST00000469750 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
BRAT1-204ENST00000469750 ZZEF1O43149 2961 aa9.37□□□□□ -0.91
BRAT1-204ENST00000469750 KALRNO60229 2985 aa9.37□□□□□ -0.91
BRAT1-204ENST00000469750 KRTAP4-16G5E9R7 235 aaPredicted RBP9.37□□□□□ -0.91
BRAT1-204ENST00000469750 Q6ZR54 194 aa9.37□□□□□ -0.91
BRAT1-204ENST00000469750 UBR5O95071 2799 aaPredicted RBP9.37□□□□□ -0.91
BRAT1-204ENST00000469750 PANO1I0J062 215 aa9.36□□□□□ -0.91
BRAT1-204ENST00000469750 ITPR2Q14571 2701 aa9.35□□□□□ -0.91
BRAT1-204ENST00000469750 USP34Q70CQ2 3546 aa9.35□□□□□ -0.91
BRAT1-204ENST00000469750 ITPR1Q14643 2758 aa9.35□□□□□ -0.91
BRAT1-204ENST00000469750 KRTAP16-1A8MUX0 517 aa9.34□□□□□ -0.91
BRAT1-204ENST00000469750 FLG2Q5D862 2391 aaPredicted RBP9.34□□□□□ -0.91
BRAT1-204ENST00000469750 TACC2O95359 2948 aa9.34□□□□□ -0.91
BRAT1-204ENST00000469750 NBEAQ8NFP9 2946 aa9.33□□□□□ -0.92
BRAT1-204ENST00000469750 LRBAP50851 2863 aa9.33□□□□□ -0.92
BRAT1-204ENST00000469750 NBEAL2Q6ZNJ1 2754 aa9.31□□□□□ -0.92
BRAT1-204ENST00000469750 UTP20O75691 2785 aaKnown RBP9.3□□□□□ -0.92
BRAT1-204ENST00000469750 A6NN06 94 aa9.29□□□□□ -0.92
BRAT1-204ENST00000469750 R4GN34 69 aa9.29□□□□□ -0.92
BRAT1-204ENST00000469750 ROMO1P60602 79 aa9.28□□□□□ -0.92
BRAT1-204ENST00000469750 LOC400499M0QZD8 3231 aa9.27□□□□□ -0.92
BRAT1-204ENST00000469750 KRTAP21-3Q3LHN1 58 aa9.27□□□□□ -0.93
BRAT1-204ENST00000469750 MYO15AQ9UKN7 3530 aa9.24□□□□□ -0.93
BRAT1-204ENST00000469750 A0A087X002 238 aa9.23□□□□□ -0.93
BRAT1-204ENST00000469750 NSD1Q96L73 2696 aaPredicted RBP9.22□□□□□ -0.93
BRAT1-204ENST00000469750 STAB2Q8WWQ8 2551 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms