RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 PDE6GP18545 87 aa10.93□□□□□ -0.66
MRPL28-208ENST00000469744 RBM3P98179 157 aaKnown RBP10.93□□□□□ -0.66
MRPL28-208ENST00000469744 SMCR5Q8TEV8 140 aa10.93□□□□□ -0.66
MRPL28-208ENST00000469744 LINC00474Q9P2X8 69 aa10.93□□□□□ -0.66
MRPL28-208ENST00000469744 MRPL55Q7Z7F7 128 aaKnown RBP10.92□□□□□ -0.66
MRPL28-208ENST00000469744 KRTAP7-1Q8IUC3 87 aa10.92□□□□□ -0.66
MRPL28-208ENST00000469744 LAMTOR3Q9UHA4 124 aa10.92□□□□□ -0.66
MRPL28-208ENST00000469744 KRTAP4-16G5E9R7 235 aaPredicted RBP10.91□□□□□ -0.66
MRPL28-208ENST00000469744 DHRS4-AS1Q9P1J3 65 aa10.91□□□□□ -0.66
MRPL28-208ENST00000469744 FAM168BA1KXE4 195 aa10.9□□□□□ -0.66
MRPL28-208ENST00000469744 B5MCH6 92 aa10.88□□□□□ -0.67
MRPL28-208ENST00000469744 Q6ZQT0 140 aa10.88□□□□□ -0.67
MRPL28-208ENST00000469744 A0A1W2PNN7 141 aa10.87□□□□□ -0.67
MRPL28-208ENST00000469744 Q6ZRX8 168 aa10.87□□□□□ -0.67
MRPL28-208ENST00000469744 LINC00846Q9NV44 126 aa10.87□□□□□ -0.67
MRPL28-208ENST00000469744 ETDCA0A1B0GVM5 59 aa10.87□□□□□ -0.67
MRPL28-208ENST00000469744 Q6JHZ5 121 aa10.87□□□□□ -0.67
MRPL28-208ENST00000469744 FAM19A5Q7Z5A7 132 aaPredicted RBP10.87□□□□□ -0.67
MRPL28-208ENST00000469744 DSCR8Q96T75 97 aa10.87□□□□□ -0.67
MRPL28-208ENST00000469744 MT1HL1P0DM35 61 aa10.86□□□□□ -0.67
MRPL28-208ENST00000469744 NDUFV3P56181 108 aaKnown RBP10.86□□□□□ -0.67
MRPL28-208ENST00000469744 RPL37AP8A6NKH3 93 aa10.84□□□□□ -0.67
MRPL28-208ENST00000469744 TRBV7-4A0A0J9YYF1 115 aa10.83□□□□□ -0.68
MRPL28-208ENST00000469744 A0A1B0GV72 72 aa10.83□□□□□ -0.68
MRPL28-208ENST00000469744 REG3GQ6UW15 175 aa10.82□□□□□ -0.68
MRPL28-208ENST00000469744 ATP5EP2Q5VTU8 51 aa10.81□□□□□ -0.68
MRPL28-208ENST00000469744 PHF5AQ7RTV0 110 aaKnown RBP10.8□□□□□ -0.68
MRPL28-208ENST00000469744 Q9BRP9 147 aa10.8□□□□□ -0.68
MRPL28-208ENST00000469744 UBL5Q9BZL1 73 aa10.79□□□□□ -0.68
MRPL28-208ENST00000469744 IGLV5-48A0A075B6I7 105 aa10.78□□□□□ -0.68
MRPL28-208ENST00000469744 LINC01547P58512 204 aaPredicted RBP10.78□□□□□ -0.68
MRPL28-208ENST00000469744 Q8N377 158 aa10.77□□□□□ -0.69
MRPL28-208ENST00000469744 ANAPC13Q9BS18 74 aa10.77□□□□□ -0.69
MRPL28-208ENST00000469744 HMCN2Q8NDA2 5059 aa10.77□□□□□ -0.69
MRPL28-208ENST00000469744 PSORS1C2Q9UIG4 136 aa10.76□□□□□ -0.69
MRPL28-208ENST00000469744 SPINK6Q6UWN8 80 aa10.75□□□□□ -0.69
MRPL28-208ENST00000469744 UBE2BP63146 152 aa10.73□□□□□ -0.69
MRPL28-208ENST00000469744 KRTAP11-1Q8IUC1 163 aa10.73□□□□□ -0.69
MRPL28-208ENST00000469744 A0A1B0GW54 56 aa10.72□□□□□ -0.69
MRPL28-208ENST00000469744 H0Y9J4 135 aa10.72□□□□□ -0.69
MRPL28-208ENST00000469744 C1orf137Q5JT78 98 aa10.72□□□□□ -0.69
MRPL28-208ENST00000469744 IGKV3D-7A0A0C4DH55 119 aa10.71□□□□□ -0.69
MRPL28-208ENST00000469744 DEFB105AQ8NG35 78 aa10.71□□□□□ -0.69
MRPL28-208ENST00000469744 TNXBP22105 4242 aa10.7□□□□□ -0.7
MRPL28-208ENST00000469744 FAM236AA0A1B0GUQ0 79 aa10.69□□□□□ -0.7
MRPL28-208ENST00000469744 FAM236BA0A1B0GV22 79 aa10.69□□□□□ -0.7
MRPL28-208ENST00000469744 HIST1H4AP62805 103 aaKnown RBP10.69□□□□□ -0.7
MRPL28-208ENST00000469744 ERC2-IT1O76042 136 aa10.68□□□□□ -0.7
MRPL28-208ENST00000469744 Q6ZVQ6 151 aa10.68□□□□□ -0.7
MRPL28-208ENST00000469744 FAM19A1Q7Z5A9 133 aa10.68□□□□□ -0.7
MRPL28-208ENST00000469744 ST20-AS1Q8NBB2 130 aa10.67□□□□□ -0.7
MRPL28-208ENST00000469744 CXCL6P80162 114 aa10.65□□□□□ -0.7
MRPL28-208ENST00000469744 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
MRPL28-208ENST00000469744 KRTAP10-8P60410 259 aa10.64□□□□□ -0.71
MRPL28-208ENST00000469744 ATOX1O00244 68 aa10.62□□□□□ -0.71
MRPL28-208ENST00000469744 SMIM29Q86T20 159 aa10.61□□□□□ -0.71
MRPL28-208ENST00000469744 SPRR1BP22528 89 aa10.61□□□□□ -0.71
MRPL28-208ENST00000469744 PRLHP81277 87 aa10.61□□□□□ -0.71
MRPL28-208ENST00000469744 IGLV8-61A0A075B6I0 122 aa10.59□□□□□ -0.71
MRPL28-208ENST00000469744 BCE1O60756 84 aa10.59□□□□□ -0.71
MRPL28-208ENST00000469744 UBR4Q5T4S7 5183 aa10.58□□□□□ -0.72
MRPL28-208ENST00000469744 F8WEM9 126 aa10.58□□□□□ -0.72
MRPL28-208ENST00000469744 C3orf22Q8N5N4 141 aa10.58□□□□□ -0.72
MRPL28-208ENST00000469744 Q8NBF4 154 aa10.58□□□□□ -0.72
MRPL28-208ENST00000469744 SPRR4Q96PI1 79 aa10.57□□□□□ -0.72
MRPL28-208ENST00000469744 HIGD2AQ9BW72 106 aa10.57□□□□□ -0.72
MRPL28-208ENST00000469744 A0A1W2PNM2 257 aa10.56□□□□□ -0.72
MRPL28-208ENST00000469744 UBE2AP49459 152 aa10.55□□□□□ -0.72
MRPL28-208ENST00000469744 NREPQ16612 68 aa10.55□□□□□ -0.72
MRPL28-208ENST00000469744 KRTAP13-1Q8IUC0 172 aa10.55□□□□□ -0.72
MRPL28-208ENST00000469744 A0A087WVE0 104 aa10.55□□□□□ -0.72
MRPL28-208ENST00000469744 PRR26Q8N8Z3 221 aa10.55□□□□□ -0.72
MRPL28-208ENST00000469744 CCDC179H3BU77 68 aa10.52□□□□□ -0.73
MRPL28-208ENST00000469744 UQCRQO14949 82 aa10.52□□□□□ -0.73
MRPL28-208ENST00000469744 KRTAP1-4P0C5Y4 121 aa10.5□□□□□ -0.73
MRPL28-208ENST00000469744 CRYGAP11844 174 aa10.5□□□□□ -0.73
MRPL28-208ENST00000469744 COX7CP15954 63 aa10.5□□□□□ -0.73
MRPL28-208ENST00000469744 LRP2P98164 4655 aa10.5□□□□□ -0.73
MRPL28-208ENST00000469744 ZNF861PO60384 105 aa10.48□□□□□ -0.73
MRPL28-208ENST00000469744 IGFL1Q6UW32 110 aa10.48□□□□□ -0.73
MRPL28-208ENST00000469744 SERP2Q8N6R1 65 aa10.48□□□□□ -0.73
MRPL28-208ENST00000469744 BPY2O14599 106 aa10.47□□□□□ -0.73
MRPL28-208ENST00000469744 SMIM20Q8N5G0 67 aa10.44□□□□□ -0.74
MRPL28-208ENST00000469744 ZNF706Q9Y5V0 76 aaPredicted RBP10.42□□□□□ -0.74
MRPL28-208ENST00000469744 IGKV4-1P06312 121 aa10.41□□□□□ -0.74
MRPL28-208ENST00000469744 LINC00483Q53H64 154 aa10.41□□□□□ -0.74
MRPL28-208ENST00000469744 C9orf153Q5TBE3 101 aa10.4□□□□□ -0.74
MRPL28-208ENST00000469744 TRAV7A0A075B6U4 112 aa10.38□□□□□ -0.75
MRPL28-208ENST00000469744 A0A087X002 238 aa10.36□□□□□ -0.75
MRPL28-208ENST00000469744 ANAPC11Q9NYG5 84 aa10.35□□□□□ -0.75
MRPL28-208ENST00000469744 LPAP08519 4548 aa10.31□□□□□ -0.76
MRPL28-208ENST00000469744 A0A087WSZ3 146 aa10.31□□□□□ -0.76
MRPL28-208ENST00000469744 A0A0G2JQZ4 141 aa10.31□□□□□ -0.76
MRPL28-208ENST00000469744 DSCR10P59022 87 aa10.31□□□□□ -0.76
MRPL28-208ENST00000469744 Q8N9L7 120 aa10.3□□□□□ -0.76
MRPL28-208ENST00000469744 RNF213Q63HN8 5207 aa10.29□□□□□ -0.76
MRPL28-208ENST00000469744 TYMSOSQ8TAI1 123 aa10.28□□□□□ -0.76
MRPL28-208ENST00000469744 KRTAP13-2Q52LG2 175 aa10.26□□□□□ -0.77
MRPL28-208ENST00000469744 PRR4Q16378 134 aa10.25□□□□□ -0.77
MRPL28-208ENST00000469744 LINC00472Q9H8W2 130 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms