RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 KLK12Q9UKR0 248 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 CSMD1Q96PZ7 3565 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 CELSR2Q9HCU4 2923 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 NBEAL1Q6ZS30 2694 aa3.15□□□□□ -1.91
SF3B1-207ENST00000468925 ABCA2Q9BZC7 2435 aa3.14□□□□□ -1.91
SF3B1-207ENST00000468925 H0Y9J4 135 aa3.14□□□□□ -1.91
SF3B1-207ENST00000468925 K7EQZ3 153 aa3.14□□□□□ -1.91
SF3B1-207ENST00000468925 LY6EQ16553 131 aa3.14□□□□□ -1.91
SF3B1-207ENST00000468925 NOTCH2NLQ7Z3S9 236 aa3.14□□□□□ -1.91
SF3B1-207ENST00000468925 ST20-AS1Q8NBB2 130 aa3.14□□□□□ -1.91
SF3B1-207ENST00000468925 A0A1W2PNM2 257 aa3.13□□□□□ -1.91
SF3B1-207ENST00000468925 DEFB112Q30KQ8 113 aa3.13□□□□□ -1.91
SF3B1-207ENST00000468925 Q8N377 158 aa3.13□□□□□ -1.91
SF3B1-207ENST00000468925 RP1L1Q8IWN7 2480 aaPredicted RBP3.13□□□□□ -1.91
SF3B1-207ENST00000468925 NIPBLQ6KC79 2804 aaeCLIP3.12□□□□□ -1.91
SF3B1-207ENST00000468925 HIVEP1P15822 2718 aa3.12□□□□□ -1.91
SF3B1-207ENST00000468925 IGLV8-61A0A075B6I0 122 aa3.12□□□□□ -1.91
SF3B1-207ENST00000468925 ANGP03950 147 aaKnown RBP3.12□□□□□ -1.91
SF3B1-207ENST00000468925 UNQ6190/PRO20217Q6UXQ8 127 aa3.12□□□□□ -1.91
SF3B1-207ENST00000468925 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
SF3B1-207ENST00000468925 XAGE1AQ9HD64 81 aa3.12□□□□□ -1.91
SF3B1-207ENST00000468925 PRR34Q9NV39 138 aa3.12□□□□□ -1.91
SF3B1-207ENST00000468925 SORL1Q92673 2214 aa3.12□□□□□ -1.91
SF3B1-207ENST00000468925 B4DSR2 109 aa3.11□□□□□ -1.91
SF3B1-207ENST00000468925 RTL8CO15255 209 aa3.11□□□□□ -1.91
SF3B1-207ENST00000468925 MSMBP08118 114 aa3.11□□□□□ -1.91
SF3B1-207ENST00000468925 PRR4Q16378 134 aa3.11□□□□□ -1.91
SF3B1-207ENST00000468925 KRTAP21-3Q3LHN1 58 aa3.11□□□□□ -1.91
SF3B1-207ENST00000468925 LELP1Q5T871 98 aa3.11□□□□□ -1.91
SF3B1-207ENST00000468925 Q8NDZ9 215 aa3.11□□□□□ -1.91
SF3B1-207ENST00000468925 DEFB124Q8NES8 71 aa3.11□□□□□ -1.91
SF3B1-207ENST00000468925 ATRQ13535 2644 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 A8MU10 97 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 A8MWP4 228 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 SPAG11AQ6PDA7 123 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 SPATA8Q6RVD6 105 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 BRD3OSQ6XYD6 125 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 Q6ZRX8 168 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 CSNK1G2-AS1Q8NCQ2 148 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 PRAC1Q96KF2 57 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 C6orf48Q9UBA6 75 aa3.1□□□□□ -1.91
SF3B1-207ENST00000468925 FBN1P35555 2871 aaKnown RBP3.1□□□□□ -1.91
SF3B1-207ENST00000468925 ANKHD1Q8IWZ3 2542 aaKnown RBP3.1□□□□□ -1.91
SF3B1-207ENST00000468925 NBASA2RRP1 2371 aa3.09□□□□□ -1.91
SF3B1-207ENST00000468925 IGKV2D-30A0A075B6S6 120 aa3.09□□□□□ -1.91
SF3B1-207ENST00000468925 SPRR1AP35321 89 aa3.09□□□□□ -1.91
SF3B1-207ENST00000468925 C18orf65Q6ZTR6 163 aa3.09□□□□□ -1.91
SF3B1-207ENST00000468925 CAMK2N2Q96S95 79 aa3.09□□□□□ -1.91
SF3B1-207ENST00000468925 AKAP9Q99996 3911 aa3.09□□□□□ -1.92
SF3B1-207ENST00000468925 UQCR11O14957 56 aa3.08□□□□□ -1.92
SF3B1-207ENST00000468925 TLX1NBP0CAT3 122 aa3.08□□□□□ -1.92
SF3B1-207ENST00000468925 ACYP2P14621 99 aa3.08□□□□□ -1.92
SF3B1-207ENST00000468925 Q6ZR54 194 aa3.08□□□□□ -1.92
SF3B1-207ENST00000468925 WNK1Q9H4A3 2382 aa3.07□□□□□ -1.92
SF3B1-207ENST00000468925 HIVEP3Q5T1R4 2406 aa3.07□□□□□ -1.92
SF3B1-207ENST00000468925 IGHV6-1A0A0B4J1U7 121 aa3.07□□□□□ -1.92
SF3B1-207ENST00000468925 SPINK7P58062 85 aa3.07□□□□□ -1.92
SF3B1-207ENST00000468925 WFDC10BQ8IUB3 73 aa3.07□□□□□ -1.92
SF3B1-207ENST00000468925 WFDC13Q8IUB5 93 aa3.07□□□□□ -1.92
SF3B1-207ENST00000468925 ZNF702PQ9H963 129 aa3.07□□□□□ -1.92
SF3B1-207ENST00000468925 STAB1Q9NY15 2570 aa3.07□□□□□ -1.92
SF3B1-207ENST00000468925 APCP25054 2843 aa3.06□□□□□ -1.92
SF3B1-207ENST00000468925 REG3GQ6UW15 175 aa3.06□□□□□ -1.92
SF3B1-207ENST00000468925 DEFB105AQ8NG35 78 aa3.06□□□□□ -1.92
SF3B1-207ENST00000468925 C7orf33Q8WU49 177 aa3.06□□□□□ -1.92
SF3B1-207ENST00000468925 BSNQ9UPA5 3926 aa3.06□□□□□ -1.92
SF3B1-207ENST00000468925 KRTAP4-16G5E9R7 235 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-207ENST00000468925 H3BNG1 76 aa3.05□□□□□ -1.92
SF3B1-207ENST00000468925 GIG44P09565 113 aaPredicted RBP3.05□□□□□ -1.92
SF3B1-207ENST00000468925 RPL37AP61513 92 aaKnown RBP3.05□□□□□ -1.92
SF3B1-207ENST00000468925 CLPSL2Q6UWE3 100 aa3.05□□□□□ -1.92
SF3B1-207ENST00000468925 FN1P02751 2386 aaKnown RBP3.05□□□□□ -1.92
SF3B1-207ENST00000468925 CSMD2Q7Z408 3487 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 IGLV10-54A0A075B6I4 117 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 IGLV1-50A0A075B6I6 118 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 A0A1B0GU69 56 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 IGLV1-51P01701 117 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 HRES1P13985 223 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 MIR22HGQ0VDD5 57 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 CCDC168Q8NDH2 2452 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 TACC2O95359 2948 aa3.04□□□□□ -1.92
SF3B1-207ENST00000468925 IGKV2-24A0A0C4DH68 120 aa3.03□□□□□ -1.92
SF3B1-207ENST00000468925 PRB2P02812 416 aaPredicted RBP3.03□□□□□ -1.92
SF3B1-207ENST00000468925 DEFB130BP0DP73 79 aa3.03□□□□□ -1.92
SF3B1-207ENST00000468925 DEFB130AP0DP74 79 aa3.03□□□□□ -1.92
SF3B1-207ENST00000468925 IGFL1Q6UW32 110 aa3.03□□□□□ -1.92
SF3B1-207ENST00000468925 LINC00472Q9H8W2 130 aa3.03□□□□□ -1.92
SF3B1-207ENST00000468925 JMJD1CQ15652 2540 aa3.03□□□□□ -1.92
SF3B1-207ENST00000468925 AKAP6Q13023 2319 aa3.03□□□□□ -1.92
SF3B1-207ENST00000468925 A0A087WSZ3 146 aa3.02□□□□□ -1.93
SF3B1-207ENST00000468925 SPRR1BP22528 89 aa3.02□□□□□ -1.93
SF3B1-207ENST00000468925 CCL19Q99731 98 aa3.02□□□□□ -1.93
SF3B1-207ENST00000468925 MMP24-AS1A0A0U1RRL7 71 aa3.01□□□□□ -1.93
SF3B1-207ENST00000468925 C10orf99Q6UWK7 81 aa3.01□□□□□ -1.93
SF3B1-207ENST00000468925 ZNF706Q9Y5V0 76 aaPredicted RBP3.01□□□□□ -1.93
SF3B1-207ENST00000468925 CR1P17927 2039 aa3□□□□□ -1.93
SF3B1-207ENST00000468925 ROMO1P60602 79 aa3□□□□□ -1.93
SF3B1-207ENST00000468925 DEFB136Q30KP8 78 aa3□□□□□ -1.93
SF3B1-207ENST00000468925 PKD1L1Q8TDX9 2849 aa2.99□□□□□ -1.93
SF3B1-207ENST00000468925 COL6A5A8TX70 2615 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms