RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 SPRR2EP22531 72 aa5.12□□□□□ -1.59
NEDD9-207ENST00000468612 SPRR2BP35325 72 aa5.12□□□□□ -1.59
NEDD9-207ENST00000468612 SPRR2AP35326 72 aa5.12□□□□□ -1.59
NEDD9-207ENST00000468612 HERVK_113P61574 105 aa5.12□□□□□ -1.59
NEDD9-207ENST00000468612 TRAV13-2A0A0B4J235 113 aa5.11□□□□□ -1.59
NEDD9-207ENST00000468612 A4D1N5 150 aa5.11□□□□□ -1.59
NEDD9-207ENST00000468612 H0Y8G0 127 aa5.11□□□□□ -1.59
NEDD9-207ENST00000468612 PLNP26678 52 aa5.11□□□□□ -1.59
NEDD9-207ENST00000468612 NHP2Q9NX24 153 aaKnown RBP5.11□□□□□ -1.59
NEDD9-207ENST00000468612 OCIAD2Q56VL3 154 aa5.1□□□□□ -1.59
NEDD9-207ENST00000468612 CHCHD1Q96BP2 118 aaKnown RBP5.1□□□□□ -1.59
NEDD9-207ENST00000468612 TRAPPC1Q9Y5R8 145 aa5.1□□□□□ -1.59
NEDD9-207ENST00000468612 SS18L2Q9UHA2 77 aa5.09□□□□□ -1.59
NEDD9-207ENST00000468612 TIMM17BO60830 172 aa5.08□□□□□ -1.6
NEDD9-207ENST00000468612 GHRHP01286 108 aa5.08□□□□□ -1.6
NEDD9-207ENST00000468612 DPM2O94777 84 aa5.07□□□□□ -1.6
NEDD9-207ENST00000468612 ANKRD39Q53RE8 183 aa5.07□□□□□ -1.6
NEDD9-207ENST00000468612 SLC7A5P1Q8MH63 180 aa5.07□□□□□ -1.6
NEDD9-207ENST00000468612 hCG_2014768A0A024R1R8 64 aa5.06□□□□□ -1.6
NEDD9-207ENST00000468612 LINC00313P59037 77 aa5.06□□□□□ -1.6
NEDD9-207ENST00000468612 COLCA2A8K830 154 aa5.05□□□□□ -1.6
NEDD9-207ENST00000468612 E9PLD3 99 aa5.05□□□□□ -1.6
NEDD9-207ENST00000468612 IGKCP01834 107 aa5.05□□□□□ -1.6
NEDD9-207ENST00000468612 SPRR2FQ96RM1 72 aa5.05□□□□□ -1.6
NEDD9-207ENST00000468612 PMCHL2Q9BQD1 86 aa5.05□□□□□ -1.6
NEDD9-207ENST00000468612 SERF1AO75920 110 aa5.04□□□□□ -1.6
NEDD9-207ENST00000468612 Q5VV11 94 aa5.04□□□□□ -1.6
NEDD9-207ENST00000468612 Q6ZQY7 126 aa5.04□□□□□ -1.6
NEDD9-207ENST00000468612 SPINK7P58062 85 aa5.03□□□□□ -1.6
NEDD9-207ENST00000468612 A0A1W2PNM2 257 aa5.02□□□□□ -1.61
NEDD9-207ENST00000468612 A6NDN8 102 aa5.02□□□□□ -1.61
NEDD9-207ENST00000468612 H3BUT2 72 aa5.02□□□□□ -1.61
NEDD9-207ENST00000468612 FAM218AQ96MZ4 157 aa5.02□□□□□ -1.61
NEDD9-207ENST00000468612 TMEM218A2RU14 115 aa5.01□□□□□ -1.61
NEDD9-207ENST00000468612 HSBP1O75506 76 aa5.01□□□□□ -1.61
NEDD9-207ENST00000468612 KRTAP19-8Q3LI54 63 aa5.01□□□□□ -1.61
NEDD9-207ENST00000468612 LINC00575Q6W349 94 aa5.01□□□□□ -1.61
NEDD9-207ENST00000468612 SMIM11BQ8TCY0 68 aa5.01□□□□□ -1.61
NEDD9-207ENST00000468612 SIGMAR1Q99720 223 aa5.01□□□□□ -1.61
NEDD9-207ENST00000468612 LEPROTL1O95214 131 aa5□□□□□ -1.61
NEDD9-207ENST00000468612 LCE1AQ5T7P2 110 aa5□□□□□ -1.61
NEDD9-207ENST00000468612 A0A087WSZ3 146 aa4.99□□□□□ -1.61
NEDD9-207ENST00000468612 hADV29S1A0JD25 119 aa4.98□□□□□ -1.61
NEDD9-207ENST00000468612 SCGB1D1O95968 90 aa4.98□□□□□ -1.61
NEDD9-207ENST00000468612 TEN1Q86WV5 123 aa4.98□□□□□ -1.61
NEDD9-207ENST00000468612 WFDC13Q8IUB5 93 aa4.98□□□□□ -1.61
NEDD9-207ENST00000468612 SPRR2DP22532 72 aa4.96□□□□□ -1.62
NEDD9-207ENST00000468612 ZCCHC13Q8WW36 166 aaKnown RBP4.96□□□□□ -1.62
NEDD9-207ENST00000468612 PPDPFLQ8WWR9 84 aa4.96□□□□□ -1.62
NEDD9-207ENST00000468612 UQCC3Q6UW78 93 aa4.95□□□□□ -1.62
NEDD9-207ENST00000468612 SNHG12Q9BXW3 62 aa4.95□□□□□ -1.62
NEDD9-207ENST00000468612 HSPB8Q9UJY1 196 aa4.95□□□□□ -1.62
NEDD9-207ENST00000468612 VAMP3Q15836 100 aa4.94□□□□□ -1.62
NEDD9-207ENST00000468612 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.94□□□□□ -1.62
NEDD9-207ENST00000468612 SPRR2GQ9BYE4 73 aa4.94□□□□□ -1.62
NEDD9-207ENST00000468612 TTTY13Q9BZ97 58 aa4.94□□□□□ -1.62
NEDD9-207ENST00000468612 IGKV4-1P06312 121 aa4.93□□□□□ -1.62
NEDD9-207ENST00000468612 IFITM1P13164 125 aa4.93□□□□□ -1.62
NEDD9-207ENST00000468612 LINC00310P59036 64 aa4.93□□□□□ -1.62
NEDD9-207ENST00000468612 FABP4P15090 132 aa4.92□□□□□ -1.62
NEDD9-207ENST00000468612 H1FX-AS1Q4G0G2 97 aa4.92□□□□□ -1.62
NEDD9-207ENST00000468612 COPS9Q8WXC6 57 aa4.92□□□□□ -1.62
NEDD9-207ENST00000468612 MUSTN1Q8IVN3 82 aa4.9□□□□□ -1.63
NEDD9-207ENST00000468612 IGHV6-1A0A0B4J1U7 121 aa4.89□□□□□ -1.63
NEDD9-207ENST00000468612 CLLU1Q5K131 121 aa4.89□□□□□ -1.63
NEDD9-207ENST00000468612 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
NEDD9-207ENST00000468612 SCGB1D4Q6XE38 83 aa4.86□□□□□ -1.63
NEDD9-207ENST00000468612 DEFB116Q30KQ4 102 aa4.85□□□□□ -1.63
NEDD9-207ENST00000468612 YPEL4Q96NS1 127 aa4.85□□□□□ -1.63
NEDD9-207ENST00000468612 FAM236AA0A1B0GUQ0 79 aa4.84□□□□□ -1.63
NEDD9-207ENST00000468612 FAM236BA0A1B0GV22 79 aa4.84□□□□□ -1.63
NEDD9-207ENST00000468612 C8orf87E5RJ46 101 aa4.84□□□□□ -1.63
NEDD9-207ENST00000468612 C3orf79P0CE67 100 aa4.84□□□□□ -1.63
NEDD9-207ENST00000468612 LINC00472Q9H8W2 130 aa4.84□□□□□ -1.63
NEDD9-207ENST00000468612 DSTQ03001 7570 aaKnown RBP4.83□□□□□ -1.64
NEDD9-207ENST00000468612 NDUFV3P56181 108 aaKnown RBP4.83□□□□□ -1.64
NEDD9-207ENST00000468612 KRTAP8-1Q8IUC2 63 aa4.83□□□□□ -1.64
NEDD9-207ENST00000468612 IMUPQ9GZP8 106 aa4.83□□□□□ -1.64
NEDD9-207ENST00000468612 SYS1-DBNDD2H3BUS1 97 aa4.81□□□□□ -1.64
NEDD9-207ENST00000468612 SMCPP49901 116 aaPredicted RBP4.81□□□□□ -1.64
NEDD9-207ENST00000468612 RAB37Q96AX2 223 aa4.81□□□□□ -1.64
NEDD9-207ENST00000468612 A0A1B0GVX0 72 aa4.8□□□□□ -1.64
NEDD9-207ENST00000468612 LINC01545Q5VT33 79 aa4.8□□□□□ -1.64
NEDD9-207ENST00000468612 C12orf57Q99622 126 aa4.8□□□□□ -1.64
NEDD9-207ENST00000468612 H3BMG7 143 aa4.79□□□□□ -1.64
NEDD9-207ENST00000468612 TRBV7-4A0A0J9YYF1 115 aa4.77□□□□□ -1.65
NEDD9-207ENST00000468612 TRGC2P03986 189 aa4.77□□□□□ -1.65
NEDD9-207ENST00000468612 BVES-AS1Q5T3Y7 98 aa4.77□□□□□ -1.65
NEDD9-207ENST00000468612 KRTAP3-3Q9BYR6 98 aa4.76□□□□□ -1.65
NEDD9-207ENST00000468612 KRTAP3-2Q9BYR7 98 aa4.76□□□□□ -1.65
NEDD9-207ENST00000468612 PET117Q6UWS5 81 aa4.74□□□□□ -1.65
NEDD9-207ENST00000468612 IGKV3D-7A0A0C4DH55 119 aa4.73□□□□□ -1.65
NEDD9-207ENST00000468612 C5orf47Q569G3 176 aa4.73□□□□□ -1.65
NEDD9-207ENST00000468612 SNAPINO95295 136 aa4.72□□□□□ -1.65
NEDD9-207ENST00000468612 APOC3P02656 99 aa4.72□□□□□ -1.65
NEDD9-207ENST00000468612 DSCR8Q96T75 97 aa4.72□□□□□ -1.65
NEDD9-207ENST00000468612 LYRM7Q5U5X0 104 aa4.71□□□□□ -1.66
NEDD9-207ENST00000468612 KRTAP4-9Q9BYQ8 210 aa4.71□□□□□ -1.66
NEDD9-207ENST00000468612 KLKP1Q107X0 134 aa4.7□□□□□ -1.66
NEDD9-207ENST00000468612 ANKRD29Q8N6D5 301 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms