RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 FP248Q71RG6 208 aaPredicted RBP6.32□□□□□ -1.4
COL4A6-205ENST00000468338 DLEU1O43261 78 aa6.3□□□□□ -1.4
COL4A6-205ENST00000468338 COX8AP10176 69 aa6.3□□□□□ -1.4
COL4A6-205ENST00000468338 SMIM11BQ8TCY0 68 aa6.3□□□□□ -1.4
COL4A6-205ENST00000468338 LINC01547P58512 204 aaPredicted RBP6.29□□□□□ -1.4
COL4A6-205ENST00000468338 SLC25A34Q6PIV7 304 aa6.29□□□□□ -1.4
COL4A6-205ENST00000468338 Q8N377 158 aa6.29□□□□□ -1.4
COL4A6-205ENST00000468338 MUC2Q02817 5179 aa6.28□□□□□ -1.4
COL4A6-205ENST00000468338 IGLV5-48A0A075B6I7 105 aa6.28□□□□□ -1.4
COL4A6-205ENST00000468338 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
COL4A6-205ENST00000468338 TEX49A0A1B0GTD5 131 aa6.27□□□□□ -1.41
COL4A6-205ENST00000468338 C9orf153Q5TBE3 101 aa6.27□□□□□ -1.41
COL4A6-205ENST00000468338 SMIM29Q86T20 159 aa6.27□□□□□ -1.41
COL4A6-205ENST00000468338 LAMTOR3Q9UHA4 124 aa6.27□□□□□ -1.41
COL4A6-205ENST00000468338 SLC25A20O43772 301 aa6.26□□□□□ -1.41
COL4A6-205ENST00000468338 TAL2Q16559 108 aa6.26□□□□□ -1.41
COL4A6-205ENST00000468338 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
COL4A6-205ENST00000468338 HIGD1BQ9P298 99 aa6.25□□□□□ -1.41
COL4A6-205ENST00000468338 DEFB105AQ8NG35 78 aa6.24□□□□□ -1.41
COL4A6-205ENST00000468338 C14orf144Q96I85 54 aa6.24□□□□□ -1.41
COL4A6-205ENST00000468338 HIST1H4GQ99525 98 aa6.24□□□□□ -1.41
COL4A6-205ENST00000468338 NHP2Q9NX24 153 aaKnown RBP6.24□□□□□ -1.41
COL4A6-205ENST00000468338 CD164Q04900 197 aa6.23□□□□□ -1.41
COL4A6-205ENST00000468338 Q1RN00 199 aa6.23□□□□□ -1.41
COL4A6-205ENST00000468338 LINC00575Q6W349 94 aa6.23□□□□□ -1.41
COL4A6-205ENST00000468338 VAMP3Q15836 100 aa6.22□□□□□ -1.41
COL4A6-205ENST00000468338 SPATA45Q537H7 98 aa6.22□□□□□ -1.41
COL4A6-205ENST00000468338 C2orf91Q6ZV80 131 aa6.22□□□□□ -1.41
COL4A6-205ENST00000468338 Q6ZVQ6 151 aa6.21□□□□□ -1.42
COL4A6-205ENST00000468338 VAMP8Q9BV40 100 aa6.21□□□□□ -1.42
COL4A6-205ENST00000468338 PRO1933Q9H354 126 aa6.21□□□□□ -1.42
COL4A6-205ENST00000468338 CFC1BP0CG36 223 aa6.2□□□□□ -1.42
COL4A6-205ENST00000468338 CFC1P0CG37 223 aa6.2□□□□□ -1.42
COL4A6-205ENST00000468338 Q5XG85 94 aa6.2□□□□□ -1.42
COL4A6-205ENST00000468338 C12orf57Q99622 126 aa6.19□□□□□ -1.42
COL4A6-205ENST00000468338 LIMD2Q9BT23 127 aa6.19□□□□□ -1.42
COL4A6-205ENST00000468338 hADV29S1A0JD25 119 aa6.18□□□□□ -1.42
COL4A6-205ENST00000468338 PYY3Q5JQD4 70 aa6.18□□□□□ -1.42
COL4A6-205ENST00000468338 BVES-AS1Q5T3Y7 98 aa6.18□□□□□ -1.42
COL4A6-205ENST00000468338 A0A0B4J2C4 111 aa6.17□□□□□ -1.42
COL4A6-205ENST00000468338 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
COL4A6-205ENST00000468338 HRCT1Q6UXD1 115 aa6.17□□□□□ -1.42
COL4A6-205ENST00000468338 Q6ZQY7 126 aa6.17□□□□□ -1.42
COL4A6-205ENST00000468338 IGLV8-61A0A075B6I0 122 aa6.16□□□□□ -1.42
COL4A6-205ENST00000468338 H7C2G1 150 aa6.16□□□□□ -1.42
COL4A6-205ENST00000468338 ASB16-AS1Q495Z4 193 aa6.16□□□□□ -1.42
COL4A6-205ENST00000468338 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.16□□□□□ -1.42
COL4A6-205ENST00000468338 CEND1Q8N111 149 aa6.16□□□□□ -1.42
COL4A6-205ENST00000468338 A0A0G2JQZ4 141 aa6.15□□□□□ -1.42
COL4A6-205ENST00000468338 PPDPFLQ8WWR9 84 aa6.15□□□□□ -1.42
COL4A6-205ENST00000468338 RAB37Q96AX2 223 aa6.14□□□□□ -1.43
COL4A6-205ENST00000468338 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
COL4A6-205ENST00000468338 FXYD2P54710 66 aa6.13□□□□□ -1.43
COL4A6-205ENST00000468338 FAT4Q6V0I7 4981 aa6.13□□□□□ -1.43
COL4A6-205ENST00000468338 H0YGX0 51 aa6.12□□□□□ -1.43
COL4A6-205ENST00000468338 C1orf195Q5TG92 126 aa6.12□□□□□ -1.43
COL4A6-205ENST00000468338 Q6JHZ5 121 aa6.12□□□□□ -1.43
COL4A6-205ENST00000468338 PRAC1Q96KF2 57 aa6.12□□□□□ -1.43
COL4A6-205ENST00000468338 A0A0U1RQV1 116 aa6.11□□□□□ -1.43
COL4A6-205ENST00000468338 F8WEM9 126 aa6.11□□□□□ -1.43
COL4A6-205ENST00000468338 OCIAD2Q56VL3 154 aa6.11□□□□□ -1.43
COL4A6-205ENST00000468338 Q8N9P0 234 aaPredicted RBP6.11□□□□□ -1.43
COL4A6-205ENST00000468338 FAM218AQ96MZ4 157 aa6.11□□□□□ -1.43
COL4A6-205ENST00000468338 PRO1854Q9UHT4 67 aa6.11□□□□□ -1.43
COL4A6-205ENST00000468338 IGFL1Q6UW32 110 aa6.1□□□□□ -1.43
COL4A6-205ENST00000468338 CLEC2BQ92478 149 aa6.1□□□□□ -1.43
COL4A6-205ENST00000468338 A0A1B0GX51 115 aa6.09□□□□□ -1.43
COL4A6-205ENST00000468338 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
COL4A6-205ENST00000468338 HSD52Q0P140 79 aa6.08□□□□□ -1.44
COL4A6-205ENST00000468338 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
COL4A6-205ENST00000468338 TRBV7-7A0A0K0K1E9 115 aa6.07□□□□□ -1.44
COL4A6-205ENST00000468338 TCL1BO95988 128 aa6.07□□□□□ -1.44
COL4A6-205ENST00000468338 SNHG12Q9BXW3 62 aa6.07□□□□□ -1.44
COL4A6-205ENST00000468338 UQCR10Q9UDW1 63 aa6.07□□□□□ -1.44
COL4A6-205ENST00000468338 SNCGO76070 127 aa6.06□□□□□ -1.44
COL4A6-205ENST00000468338 C9orf92A6NGG3 77 aa6.04□□□□□ -1.44
COL4A6-205ENST00000468338 H3BUT2 72 aa6.04□□□□□ -1.44
COL4A6-205ENST00000468338 NDUFV3P56181 108 aaKnown RBP6.04□□□□□ -1.44
COL4A6-205ENST00000468338 Q6Q795 121 aa6.04□□□□□ -1.44
COL4A6-205ENST00000468338 K7ERJ3 54 aa6.02□□□□□ -1.45
COL4A6-205ENST00000468338 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
COL4A6-205ENST00000468338 TEN1Q86WV5 123 aa6□□□□□ -1.45
COL4A6-205ENST00000468338 H3BMG7 143 aa5.99□□□□□ -1.45
COL4A6-205ENST00000468338 COX6CP09669 75 aa5.98□□□□□ -1.45
COL4A6-205ENST00000468338 PCOTHQ58A44 107 aa5.98□□□□□ -1.45
COL4A6-205ENST00000468338 H3BQ85 93 aa5.97□□□□□ -1.45
COL4A6-205ENST00000468338 FABP2P12104 132 aa5.97□□□□□ -1.45
COL4A6-205ENST00000468338 PSMB2P49721 201 aa5.97□□□□□ -1.45
COL4A6-205ENST00000468338 RPL37P61927 97 aaKnown RBP5.97□□□□□ -1.45
COL4A6-205ENST00000468338 A0A1W2PNM2 257 aa5.96□□□□□ -1.46
COL4A6-205ENST00000468338 LST1O00453 97 aa5.96□□□□□ -1.46
COL4A6-205ENST00000468338 KRTAP19-2Q3LHN2 52 aa5.96□□□□□ -1.46
COL4A6-205ENST00000468338 ORMDL1Q9P0S3 153 aa5.96□□□□□ -1.46
COL4A6-205ENST00000468338 SS18L2Q9UHA2 77 aa5.96□□□□□ -1.46
COL4A6-205ENST00000468338 TMEM256-PLSCR3K7ERE1 68 aa5.95□□□□□ -1.46
COL4A6-205ENST00000468338 DNAL4O96015 105 aa5.95□□□□□ -1.46
COL4A6-205ENST00000468338 TRACP01848 142 aa5.95□□□□□ -1.46
COL4A6-205ENST00000468338 Q96NJ1 140 aa5.94□□□□□ -1.46
COL4A6-205ENST00000468338 A0A087WSZ3 146 aa5.93□□□□□ -1.46
COL4A6-205ENST00000468338 SMIM6P0DI80 62 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms