RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 IGLV1-50A0A075B6I6 118 aa9.16□□□□□ -0.94
DDX56-208ENST00000467318 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
DDX56-208ENST00000467318 C3orf22Q8N5N4 141 aa9.16□□□□□ -0.94
DDX56-208ENST00000467318 IGKV3D-7A0A0C4DH55 119 aa9.16□□□□□ -0.94
DDX56-208ENST00000467318 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
DDX56-208ENST00000467318 Q6ZQT0 140 aa9.16□□□□□ -0.94
DDX56-208ENST00000467318 Q6ZQY7 126 aa9.16□□□□□ -0.94
DDX56-208ENST00000467318 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
DDX56-208ENST00000467318 FAT1Q14517 4588 aa9.14□□□□□ -0.95
DDX56-208ENST00000467318 PSORS1C2Q9UIG4 136 aa9.13□□□□□ -0.95
DDX56-208ENST00000467318 COX7CP15954 63 aa9.13□□□□□ -0.95
DDX56-208ENST00000467318 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
DDX56-208ENST00000467318 Q8N1X5 172 aa9.13□□□□□ -0.95
DDX56-208ENST00000467318 KCNQ1DNQ9H478 68 aa9.13□□□□□ -0.95
DDX56-208ENST00000467318 RPL37AP61513 92 aaKnown RBP9.12□□□□□ -0.95
DDX56-208ENST00000467318 PLA2G1BP04054 148 aaKnown RBP9.11□□□□□ -0.95
DDX56-208ENST00000467318 PRYO14603 147 aa9.1□□□□□ -0.95
DDX56-208ENST00000467318 C9orf153Q5TBE3 101 aa9.1□□□□□ -0.95
DDX56-208ENST00000467318 REG3GQ6UW15 175 aa9.1□□□□□ -0.95
DDX56-208ENST00000467318 SS18L2Q9UHA2 77 aa9.1□□□□□ -0.95
DDX56-208ENST00000467318 C1orf137Q5JT78 98 aa9.1□□□□□ -0.95
DDX56-208ENST00000467318 Q5VSD8 79 aa9.09□□□□□ -0.95
DDX56-208ENST00000467318 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
DDX56-208ENST00000467318 BCE1O60756 84 aa9.07□□□□□ -0.96
DDX56-208ENST00000467318 SPRR1AP35321 89 aa9.07□□□□□ -0.96
DDX56-208ENST00000467318 SERP2Q8N6R1 65 aa9.07□□□□□ -0.96
DDX56-208ENST00000467318 TRBV7-4A0A0J9YYF1 115 aa9.07□□□□□ -0.96
DDX56-208ENST00000467318 CRYGAP11844 174 aa9.06□□□□□ -0.96
DDX56-208ENST00000467318 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
DDX56-208ENST00000467318 KRTAP10-4P60372 401 aaPredicted RBP9.05□□□□□ -0.96
DDX56-208ENST00000467318 KRTAP4-5Q9BYR2 181 aa9.05□□□□□ -0.96
DDX56-208ENST00000467318 CXCL6P80162 114 aa9.04□□□□□ -0.96
DDX56-208ENST00000467318 DHRS4-AS1Q9P1J3 65 aa9.04□□□□□ -0.96
DDX56-208ENST00000467318 HERC2O95714 4834 aa9.04□□□□□ -0.96
DDX56-208ENST00000467318 KRTAP4-16G5E9R7 235 aaPredicted RBP9.04□□□□□ -0.96
DDX56-208ENST00000467318 ETDCA0A1B0GVM5 59 aa9.03□□□□□ -0.96
DDX56-208ENST00000467318 FAM19A1Q7Z5A9 133 aa9.03□□□□□ -0.96
DDX56-208ENST00000467318 A0A087WVE0 104 aa9.02□□□□□ -0.97
DDX56-208ENST00000467318 H0Y9J4 135 aa9.02□□□□□ -0.97
DDX56-208ENST00000467318 ZNF861PO60384 105 aa9.02□□□□□ -0.97
DDX56-208ENST00000467318 UBE2AP49459 152 aa9.02□□□□□ -0.97
DDX56-208ENST00000467318 Q6ZVQ6 151 aa9.02□□□□□ -0.97
DDX56-208ENST00000467318 SMIM20Q8N5G0 67 aa9.01□□□□□ -0.97
DDX56-208ENST00000467318 LINC01547P58512 204 aaPredicted RBP9□□□□□ -0.97
DDX56-208ENST00000467318 A0A1B0GW54 56 aa9□□□□□ -0.97
DDX56-208ENST00000467318 KRTAP13-1Q8IUC0 172 aa9□□□□□ -0.97
DDX56-208ENST00000467318 SRRM2Q9UQ35 2752 aaKnown RBP9□□□□□ -0.97
DDX56-208ENST00000467318 SPINK6Q6UWN8 80 aa8.99□□□□□ -0.97
DDX56-208ENST00000467318 Q6ZRX8 168 aa8.99□□□□□ -0.97
DDX56-208ENST00000467318 PRLHP81277 87 aa8.98□□□□□ -0.97
DDX56-208ENST00000467318 HIGD2AQ9BW72 106 aa8.95□□□□□ -0.98
DDX56-208ENST00000467318 IGLV5-48A0A075B6I7 105 aa8.93□□□□□ -0.98
DDX56-208ENST00000467318 TRAV7A0A075B6U4 112 aa8.93□□□□□ -0.98
DDX56-208ENST00000467318 Q8N377 158 aa8.93□□□□□ -0.98
DDX56-208ENST00000467318 Q9BRP9 147 aa8.93□□□□□ -0.98
DDX56-208ENST00000467318 TMEM258P61165 79 aa8.92□□□□□ -0.98
DDX56-208ENST00000467318 NREPQ16612 68 aa8.91□□□□□ -0.98
DDX56-208ENST00000467318 DEFB105AQ8NG35 78 aa8.9□□□□□ -0.98
DDX56-208ENST00000467318 ABCA13Q86UQ4 5058 aa8.89□□□□□ -0.99
DDX56-208ENST00000467318 RPS28P62857 69 aaKnown RBP8.88□□□□□ -0.99
DDX56-208ENST00000467318 ZNF706Q9Y5V0 76 aaPredicted RBP8.88□□□□□ -0.99
DDX56-208ENST00000467318 FLG2Q5D862 2391 aaPredicted RBP8.87□□□□□ -0.99
DDX56-208ENST00000467318 ERC2-IT1O76042 136 aa8.87□□□□□ -0.99
DDX56-208ENST00000467318 J3KT08 172 aa8.85□□□□□ -0.99
DDX56-208ENST00000467318 BPY2O14599 106 aa8.84□□□□□ -0.99
DDX56-208ENST00000467318 SPRR4Q96PI1 79 aa8.84□□□□□ -0.99
DDX56-208ENST00000467318 KRTAP1-4P0C5Y4 121 aa8.83□□□□□ -1
DDX56-208ENST00000467318 F8WEM9 126 aa8.81□□□□□ -1
DDX56-208ENST00000467318 Q8NBF4 154 aa8.81□□□□□ -1
DDX56-208ENST00000467318 ST20-AS1Q8NBB2 130 aa8.81□□□□□ -1
DDX56-208ENST00000467318 MYCBP2O75592 4640 aa8.81□□□□□ -1
DDX56-208ENST00000467318 PKHD1L1Q86WI1 4243 aa8.8□□□□□ -1
DDX56-208ENST00000467318 FAM229BQ4G0N7 80 aa8.8□□□□□ -1
DDX56-208ENST00000467318 LINC00483Q53H64 154 aa8.8□□□□□ -1
DDX56-208ENST00000467318 C20orf197Q8N268 126 aa8.8□□□□□ -1
DDX56-208ENST00000467318 LRP1Q07954 4544 aaKnown RBP8.8□□□□□ -1
DDX56-208ENST00000467318 A0A1W2PNM2 257 aa8.78□□□□□ -1
DDX56-208ENST00000467318 OXTP01178 125 aa8.78□□□□□ -1
DDX56-208ENST00000467318 IGKV4-1P06312 121 aa8.78□□□□□ -1
DDX56-208ENST00000467318 KLKP1Q107X0 134 aa8.78□□□□□ -1
DDX56-208ENST00000467318 NDUFC1O43677 76 aa8.78□□□□□ -1
DDX56-208ENST00000467318 SPRR1BP22528 89 aa8.78□□□□□ -1
DDX56-208ENST00000467318 PCLOQ9Y6V0 5065 aa8.77□□□□□ -1
DDX56-208ENST00000467318 CYSTM1Q9H1C7 97 aa8.77□□□□□ -1.01
DDX56-208ENST00000467318 ANAPC11Q9NYG5 84 aa8.77□□□□□ -1.01
DDX56-208ENST00000467318 IGLV8-61A0A075B6I0 122 aa8.75□□□□□ -1.01
DDX56-208ENST00000467318 KRTAP29-1A8MX34 341 aaPredicted RBP8.75□□□□□ -1.01
DDX56-208ENST00000467318 SMIM29Q86T20 159 aa8.75□□□□□ -1.01
DDX56-208ENST00000467318 A0A087X002 238 aa8.74□□□□□ -1.01
DDX56-208ENST00000467318 PRR26Q8N8Z3 221 aa8.73□□□□□ -1.01
DDX56-208ENST00000467318 FAT3Q8TDW7 4589 aa8.71□□□□□ -1.01
DDX56-208ENST00000467318 FAM236DA0A1B0GTK5 79 aa8.71□□□□□ -1.02
DDX56-208ENST00000467318 FAM236CP0DP71 79 aa8.71□□□□□ -1.02
DDX56-208ENST00000467318 ATP5EP56381 51 aaPredicted RBP8.7□□□□□ -1.02
DDX56-208ENST00000467318 KRTAP10-8P60410 259 aa8.7□□□□□ -1.02
DDX56-208ENST00000467318 H7BZZ5 65 aa8.69□□□□□ -1.02
DDX56-208ENST00000467318 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
DDX56-208ENST00000467318 TYMSOSQ8TAI1 123 aa8.69□□□□□ -1.02
DDX56-208ENST00000467318 Q8N9L7 120 aa8.69□□□□□ -1.02
DDX56-208ENST00000467318 IGLV9-49A0A0B4J1Y8 123 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms