RNA–Protein interactions for RNA: ENST00000467061.1

TMEM41A-204, Transcript of transmembrane protein 41A, humanhuman

TSL 2

Gene TMEM41A, Length 4,921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41A-204ENST00000467061 Q8N1X5 172 aa9.63□□□□□ -0.87
TMEM41A-204ENST00000467061 Q8N9P0 234 aaPredicted RBP9.63□□□□□ -0.87
TMEM41A-204ENST00000467061 CRIPTQ9P021 101 aa9.63□□□□□ -0.87
TMEM41A-204ENST00000467061 SPINT4Q6UDR6 99 aa9.62□□□□□ -0.87
TMEM41A-204ENST00000467061 FP248Q71RG6 208 aaPredicted RBP9.62□□□□□ -0.87
TMEM41A-204ENST00000467061 WDFY4Q6ZS81 3184 aa9.61□□□□□ -0.87
TMEM41A-204ENST00000467061 TEX15Q9BXT5 2789 aa9.6□□□□□ -0.87
TMEM41A-204ENST00000467061 J3QL48 77 aa9.6□□□□□ -0.87
TMEM41A-204ENST00000467061 RBM12B-AS1Q9P1G2 102 aa9.6□□□□□ -0.87
TMEM41A-204ENST00000467061 UNC79Q9P2D8 2635 aa9.6□□□□□ -0.87
TMEM41A-204ENST00000467061 KRTAP4-16G5E9R7 235 aaPredicted RBP9.58□□□□□ -0.88
TMEM41A-204ENST00000467061 KRTAP1-5Q9BYS1 174 aa9.58□□□□□ -0.88
TMEM41A-204ENST00000467061 STAB1Q9NY15 2570 aa9.56□□□□□ -0.88
TMEM41A-204ENST00000467061 IGSF10Q6WRI0 2623 aa9.55□□□□□ -0.88
TMEM41A-204ENST00000467061 DSPP15924 2871 aaKnown RBP9.54□□□□□ -0.88
TMEM41A-204ENST00000467061 TEP1Q99973 2627 aaKnown RBP9.54□□□□□ -0.88
TMEM41A-204ENST00000467061 ZCCHC13Q8WW36 166 aaKnown RBP9.53□□□□□ -0.88
TMEM41A-204ENST00000467061 COL6A5A8TX70 2615 aa9.52□□□□□ -0.88
TMEM41A-204ENST00000467061 COX6B2Q6YFQ2 88 aa9.52□□□□□ -0.89
TMEM41A-204ENST00000467061 LINC00483Q53H64 154 aa9.51□□□□□ -0.89
TMEM41A-204ENST00000467061 SETXQ7Z333 2677 aaKnown RBP9.5□□□□□ -0.89
TMEM41A-204ENST00000467061 BRCA2P51587 3418 aa9.49□□□□□ -0.89
TMEM41A-204ENST00000467061 NOTCH1P46531 2555 aa9.49□□□□□ -0.89
TMEM41A-204ENST00000467061 NBEAL1Q6ZS30 2694 aa9.49□□□□□ -0.89
TMEM41A-204ENST00000467061 Q5W150 140 aa9.49□□□□□ -0.89
TMEM41A-204ENST00000467061 A0A1B0GU33 70 aa9.47□□□□□ -0.89
TMEM41A-204ENST00000467061 PRUNE2Q8WUY3 3088 aa9.47□□□□□ -0.89
TMEM41A-204ENST00000467061 VPS13AQ96RL7 3174 aa9.46□□□□□ -0.89
TMEM41A-204ENST00000467061 Q5VV11 94 aa9.46□□□□□ -0.89
TMEM41A-204ENST00000467061 TRIOO75962 3097 aa9.45□□□□□ -0.9
TMEM41A-204ENST00000467061 FRYQ5TBA9 3013 aa9.44□□□□□ -0.9
TMEM41A-204ENST00000467061 MAP1AP78559 2803 aaPredicted RBP9.44□□□□□ -0.9
TMEM41A-204ENST00000467061 KRTAP29-1A8MX34 341 aaPredicted RBP9.43□□□□□ -0.9
TMEM41A-204ENST00000467061 OXTP01178 125 aa9.43□□□□□ -0.9
TMEM41A-204ENST00000467061 Q6ZR54 194 aa9.42□□□□□ -0.9
TMEM41A-204ENST00000467061 NBEAL2Q6ZNJ1 2754 aa9.41□□□□□ -0.9
TMEM41A-204ENST00000467061 UNC80Q8N2C7 3258 aa9.41□□□□□ -0.9
TMEM41A-204ENST00000467061 UBR5O95071 2799 aaPredicted RBP9.39□□□□□ -0.91
TMEM41A-204ENST00000467061 A0A0D9SG42 100 aa9.38□□□□□ -0.91
TMEM41A-204ENST00000467061 Q6ZSA8 131 aa9.38□□□□□ -0.91
TMEM41A-204ENST00000467061 DMAC1Q96GE9 116 aa9.36□□□□□ -0.91
TMEM41A-204ENST00000467061 XIRP2A4UGR9 3374 aa9.3□□□□□ -0.92
TMEM41A-204ENST00000467061 SPINK7P58062 85 aa9.3□□□□□ -0.92
TMEM41A-204ENST00000467061 NSD1Q96L73 2696 aaPredicted RBP9.29□□□□□ -0.92
TMEM41A-204ENST00000467061 PANO1I0J062 215 aa9.28□□□□□ -0.92
TMEM41A-204ENST00000467061 FLNCQ14315 2725 aa9.28□□□□□ -0.92
TMEM41A-204ENST00000467061 LINC01554Q52M75 96 aa9.28□□□□□ -0.92
TMEM41A-204ENST00000467061 KRTAP10-1P60331 282 aa9.27□□□□□ -0.92
TMEM41A-204ENST00000467061 LCE6AA0A183 80 aa9.27□□□□□ -0.93
TMEM41A-204ENST00000467061 ASB16-AS1Q495Z4 193 aa9.27□□□□□ -0.93
TMEM41A-204ENST00000467061 CSAG1Q6PB30 78 aa9.26□□□□□ -0.93
TMEM41A-204ENST00000467061 ITPR1Q14643 2758 aa9.25□□□□□ -0.93
TMEM41A-204ENST00000467061 KRTAP10-2P60368 255 aa9.24□□□□□ -0.93
TMEM41A-204ENST00000467061 ITPR2Q14571 2701 aa9.23□□□□□ -0.93
TMEM41A-204ENST00000467061 S4R3F8 94 aa9.22□□□□□ -0.93
TMEM41A-204ENST00000467061 CDH23Q9H251 3354 aa9.22□□□□□ -0.93
TMEM41A-204ENST00000467061 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
TMEM41A-204ENST00000467061 KRTAP7-1Q8IUC3 87 aa9.2□□□□□ -0.94
TMEM41A-204ENST00000467061 KMT2BQ9UMN6 2715 aaPredicted RBP9.19□□□□□ -0.94
TMEM41A-204ENST00000467061 KALRNO60229 2985 aa9.18□□□□□ -0.94
TMEM41A-204ENST00000467061 NBEAQ8NFP9 2946 aa9.17□□□□□ -0.94
TMEM41A-204ENST00000467061 STAB2Q8WWQ8 2551 aa9.16□□□□□ -0.94
TMEM41A-204ENST00000467061 LAMA1P25391 3075 aa9.16□□□□□ -0.94
TMEM41A-204ENST00000467061 RPS29P62273 56 aaKnown RBP9.14□□□□□ -0.95
TMEM41A-204ENST00000467061 ATMQ13315 3056 aa9.14□□□□□ -0.95
TMEM41A-204ENST00000467061 KRTAP13-1Q8IUC0 172 aa9.13□□□□□ -0.95
TMEM41A-204ENST00000467061 KRTAP11-1Q8IUC1 163 aa9.13□□□□□ -0.95
TMEM41A-204ENST00000467061 A0A087X002 238 aa9.13□□□□□ -0.95
TMEM41A-204ENST00000467061 PRAC1Q96KF2 57 aa9.12□□□□□ -0.95
TMEM41A-204ENST00000467061 ADGRG4Q8IZF6 3080 aa9.12□□□□□ -0.95
TMEM41A-204ENST00000467061 CAMK2N1Q7Z7J9 78 aa9.11□□□□□ -0.95
TMEM41A-204ENST00000467061 LUZP6Q538Z0 58 aa9.09□□□□□ -0.95
TMEM41A-204ENST00000467061 RPL37P61927 97 aaKnown RBP9.09□□□□□ -0.95
TMEM41A-204ENST00000467061 BAHCC1Q9P281 2608 aa9.08□□□□□ -0.96
TMEM41A-204ENST00000467061 DMBT1Q9UGM3 2413 aaPredicted RBP9.08□□□□□ -0.96
TMEM41A-204ENST00000467061 SEC61BP60468 96 aaKnown RBP9.07□□□□□ -0.96
TMEM41A-204ENST00000467061 H1FX-AS1Q4G0G2 97 aa9.07□□□□□ -0.96
TMEM41A-204ENST00000467061 NOTCH2NLQ7Z3S9 236 aa9.07□□□□□ -0.96
TMEM41A-204ENST00000467061 Q5VSD8 79 aa9.07□□□□□ -0.96
TMEM41A-204ENST00000467061 CELSR3Q9NYQ7 3312 aa9.06□□□□□ -0.96
TMEM41A-204ENST00000467061 COL12A1Q99715 3063 aa9.06□□□□□ -0.96
TMEM41A-204ENST00000467061 FRYLO94915 3013 aa9.04□□□□□ -0.96
TMEM41A-204ENST00000467061 VCANP13611 3396 aa9.04□□□□□ -0.96
TMEM41A-204ENST00000467061 SZT2Q5T011 3432 aa9.04□□□□□ -0.96
TMEM41A-204ENST00000467061 NIPBLQ6KC79 2804 aaeCLIP9.04□□□□□ -0.96
TMEM41A-204ENST00000467061 UTP20O75691 2785 aaKnown RBP9.04□□□□□ -0.96
TMEM41A-204ENST00000467061 SPATA8Q6RVD6 105 aa9.04□□□□□ -0.96
TMEM41A-204ENST00000467061 TACC2O95359 2948 aa9.03□□□□□ -0.96
TMEM41A-204ENST00000467061 FLG2Q5D862 2391 aaPredicted RBP9.03□□□□□ -0.96
TMEM41A-204ENST00000467061 R4GN34 69 aa9.01□□□□□ -0.97
TMEM41A-204ENST00000467061 LRBAP50851 2863 aa9.01□□□□□ -0.97
TMEM41A-204ENST00000467061 ROMO1P60602 79 aa8.99□□□□□ -0.97
TMEM41A-204ENST00000467061 BOD1L1Q8NFC6 3051 aa8.97□□□□□ -0.97
TMEM41A-204ENST00000467061 HIVEP1P15822 2718 aa8.96□□□□□ -0.97
TMEM41A-204ENST00000467061 DMXL2Q8TDJ6 3036 aa8.96□□□□□ -0.98
TMEM41A-204ENST00000467061 FREM2Q5SZK8 3169 aa8.95□□□□□ -0.98
TMEM41A-204ENST00000467061 APCP25054 2843 aa8.94□□□□□ -0.98
TMEM41A-204ENST00000467061 KRTAP13-2Q52LG2 175 aa8.92□□□□□ -0.98
TMEM41A-204ENST00000467061 ZZEF1O43149 2961 aa8.9□□□□□ -0.98
TMEM41A-204ENST00000467061 DNAH14Q0VDD8 3507 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms