RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 DEFB105AQ8NG35 78 aa8.95□□□□□ -0.98
NPHP4-205ENST00000466897 NAA38Q9BRA0 125 aaKnown RBP8.95□□□□□ -0.98
NPHP4-205ENST00000466897 LAMTOR3Q9UHA4 124 aa8.95□□□□□ -0.98
NPHP4-205ENST00000466897 H3BQ85 93 aa8.94□□□□□ -0.98
NPHP4-205ENST00000466897 TYMSOSQ8TAI1 123 aa8.94□□□□□ -0.98
NPHP4-205ENST00000466897 TNXBP22105 4242 aa8.93□□□□□ -0.98
NPHP4-205ENST00000466897 TRBV20-1A0A075B6N2 111 aa8.93□□□□□ -0.98
NPHP4-205ENST00000466897 J3QL48 77 aa8.93□□□□□ -0.98
NPHP4-205ENST00000466897 SMIM29Q86T20 159 aa8.93□□□□□ -0.98
NPHP4-205ENST00000466897 A0A1W2PPM0 123 aa8.92□□□□□ -0.98
NPHP4-205ENST00000466897 ATXN8Q156A1 80 aa8.92□□□□□ -0.98
NPHP4-205ENST00000466897 C3orf22Q8N5N4 141 aa8.92□□□□□ -0.98
NPHP4-205ENST00000466897 TCL1BO95988 128 aa8.91□□□□□ -0.98
NPHP4-205ENST00000466897 SSBP3-AS1Q7Z2R9 100 aa8.91□□□□□ -0.98
NPHP4-205ENST00000466897 Q8NBF4 154 aa8.91□□□□□ -0.98
NPHP4-205ENST00000466897 ORMDL1Q9P0S3 153 aa8.91□□□□□ -0.98
NPHP4-205ENST00000466897 DMBT1Q9UGM3 2413 aaPredicted RBP8.91□□□□□ -0.98
NPHP4-205ENST00000466897 IGLV9-49A0A0B4J1Y8 123 aa8.9□□□□□ -0.98
NPHP4-205ENST00000466897 FABP2P12104 132 aa8.89□□□□□ -0.99
NPHP4-205ENST00000466897 MOBPQ13875 183 aa8.89□□□□□ -0.99
NPHP4-205ENST00000466897 TMEM256-PLSCR3K7ERE1 68 aa8.87□□□□□ -0.99
NPHP4-205ENST00000466897 C9orf153Q5TBE3 101 aa8.87□□□□□ -0.99
NPHP4-205ENST00000466897 IGLV8-61A0A075B6I0 122 aa8.86□□□□□ -0.99
NPHP4-205ENST00000466897 F8WEM9 126 aa8.86□□□□□ -0.99
NPHP4-205ENST00000466897 SPAG11AQ6PDA7 123 aa8.85□□□□□ -0.99
NPHP4-205ENST00000466897 HERC1Q15751 4861 aa8.84□□□□□ -0.99
NPHP4-205ENST00000466897 NDUFV3P56181 108 aaKnown RBP8.84□□□□□ -0.99
NPHP4-205ENST00000466897 UBE2V1Q13404 147 aa8.84□□□□□ -0.99
NPHP4-205ENST00000466897 LINC00304Q8N9R0 145 aa8.84□□□□□ -0.99
NPHP4-205ENST00000466897 Q6JHZ5 121 aa8.82□□□□□ -1
NPHP4-205ENST00000466897 SPCS1Q9Y6A9 102 aa8.82□□□□□ -1
NPHP4-205ENST00000466897 BAALC-AS2P0C853 105 aa8.8□□□□□ -1
NPHP4-205ENST00000466897 RPS29P62273 56 aaKnown RBP8.8□□□□□ -1
NPHP4-205ENST00000466897 CD164Q04900 197 aa8.8□□□□□ -1
NPHP4-205ENST00000466897 H3BMG7 143 aa8.79□□□□□ -1
NPHP4-205ENST00000466897 SPINK1P00995 79 aa8.79□□□□□ -1
NPHP4-205ENST00000466897 C4orf48Q5BLP8 95 aa8.79□□□□□ -1
NPHP4-205ENST00000466897 C9JAW5 83 aa8.78□□□□□ -1
NPHP4-205ENST00000466897 H3BT86 120 aa8.77□□□□□ -1.01
NPHP4-205ENST00000466897 K7EP34 96 aa8.77□□□□□ -1.01
NPHP4-205ENST00000466897 ANKRD29Q8N6D5 301 aa8.77□□□□□ -1.01
NPHP4-205ENST00000466897 IGFL1Q6UW32 110 aa8.76□□□□□ -1.01
NPHP4-205ENST00000466897 GTF2H5Q6ZYL4 71 aa8.75□□□□□ -1.01
NPHP4-205ENST00000466897 JMJD7-PLA2G4BH0Y9G9 81 aa8.72□□□□□ -1.01
NPHP4-205ENST00000466897 Q6Q795 121 aa8.72□□□□□ -1.01
NPHP4-205ENST00000466897 TRBV7-4A0A0J9YYF1 115 aa8.71□□□□□ -1.02
NPHP4-205ENST00000466897 RBM3P98179 157 aaKnown RBP8.71□□□□□ -1.02
NPHP4-205ENST00000466897 Q5XG85 94 aa8.71□□□□□ -1.02
NPHP4-205ENST00000466897 A0A0G2JQZ4 141 aa8.7□□□□□ -1.02
NPHP4-205ENST00000466897 OBSCN-AS1Q96MR7 158 aa8.7□□□□□ -1.02
NPHP4-205ENST00000466897 LIMD2Q9BT23 127 aa8.7□□□□□ -1.02
NPHP4-205ENST00000466897 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
NPHP4-205ENST00000466897 PRO0461Q9UI25 63 aa8.69□□□□□ -1.02
NPHP4-205ENST00000466897 TRBV7-7A0A0K0K1E9 115 aa8.68□□□□□ -1.02
NPHP4-205ENST00000466897 MTURNQ8N3F0 131 aa8.68□□□□□ -1.02
NPHP4-205ENST00000466897 DSCR8Q96T75 97 aa8.68□□□□□ -1.02
NPHP4-205ENST00000466897 HRCT1Q6UXD1 115 aa8.67□□□□□ -1.02
NPHP4-205ENST00000466897 SMCPP49901 116 aaPredicted RBP8.66□□□□□ -1.02
NPHP4-205ENST00000466897 LOC110117498A0A087WWA1 95 aa8.65□□□□□ -1.02
NPHP4-205ENST00000466897 A0A1B0GV72 72 aa8.65□□□□□ -1.02
NPHP4-205ENST00000466897 A0A1W2PNM2 257 aa8.65□□□□□ -1.02
NPHP4-205ENST00000466897 PDE6GP18545 87 aa8.65□□□□□ -1.02
NPHP4-205ENST00000466897 C21orf62-AS1Q17RA5 79 aa8.65□□□□□ -1.02
NPHP4-205ENST00000466897 F8W1H4 67 aa8.64□□□□□ -1.03
NPHP4-205ENST00000466897 CCKP06307 115 aa8.63□□□□□ -1.03
NPHP4-205ENST00000466897 ASB16-AS1Q495Z4 193 aa8.63□□□□□ -1.03
NPHP4-205ENST00000466897 Q6ZQT0 140 aa8.62□□□□□ -1.03
NPHP4-205ENST00000466897 FP248Q71RG6 208 aaPredicted RBP8.61□□□□□ -1.03
NPHP4-205ENST00000466897 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
NPHP4-205ENST00000466897 A0A1B0GW54 56 aa8.6□□□□□ -1.03
NPHP4-205ENST00000466897 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
NPHP4-205ENST00000466897 A0A087WSZ3 146 aa8.58□□□□□ -1.04
NPHP4-205ENST00000466897 A0A1B0GV90 55 aa8.58□□□□□ -1.04
NPHP4-205ENST00000466897 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
NPHP4-205ENST00000466897 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
NPHP4-205ENST00000466897 PRR4Q16378 134 aa8.55□□□□□ -1.04
NPHP4-205ENST00000466897 C1orf195Q5TG92 126 aa8.55□□□□□ -1.04
NPHP4-205ENST00000466897 VPS25Q9BRG1 176 aa8.55□□□□□ -1.04
NPHP4-205ENST00000466897 IGLV7-46A0A075B6I9 117 aa8.51□□□□□ -1.05
NPHP4-205ENST00000466897 ETDBQ3ZM63 59 aa8.51□□□□□ -1.05
NPHP4-205ENST00000466897 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
NPHP4-205ENST00000466897 Q96NJ1 140 aa8.49□□□□□ -1.05
NPHP4-205ENST00000466897 LINC00472Q9H8W2 130 aa8.46□□□□□ -1.06
NPHP4-205ENST00000466897 KRTAP13-3Q3SY46 172 aa8.44□□□□□ -1.06
NPHP4-205ENST00000466897 J3KT08 172 aa8.41□□□□□ -1.06
NPHP4-205ENST00000466897 IGKV4-1P06312 121 aa8.39□□□□□ -1.07
NPHP4-205ENST00000466897 NREPQ16612 68 aa8.39□□□□□ -1.07
NPHP4-205ENST00000466897 LPAP08519 4548 aa8.38□□□□□ -1.07
NPHP4-205ENST00000466897 SIGMAR1Q99720 223 aa8.37□□□□□ -1.07
NPHP4-205ENST00000466897 CDIP1Q9H305 208 aa8.36□□□□□ -1.07
NPHP4-205ENST00000466897 FAM240AA0A1B0GVK7 77 aa8.35□□□□□ -1.07
NPHP4-205ENST00000466897 Q6ZVQ6 151 aa8.35□□□□□ -1.07
NPHP4-205ENST00000466897 LINC00846Q9NV44 126 aa8.35□□□□□ -1.07
NPHP4-205ENST00000466897 LRP2P98164 4655 aa8.34□□□□□ -1.07
NPHP4-205ENST00000466897 ACYP1P07311 99 aa8.34□□□□□ -1.07
NPHP4-205ENST00000466897 DEFB116Q30KQ4 102 aa8.34□□□□□ -1.07
NPHP4-205ENST00000466897 UBL5Q9BZL1 73 aa8.34□□□□□ -1.07
NPHP4-205ENST00000466897 UBR4Q5T4S7 5183 aa8.34□□□□□ -1.07
NPHP4-205ENST00000466897 A8MWP4 228 aa8.31□□□□□ -1.08
NPHP4-205ENST00000466897 XP32Q5T750 250 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms