RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 TJP1Q07157 1748 aa-0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 ITSN1Q15811 1721 aa-0.01□□□□□ -2.41
GTF3C3-209ENST00000466862 RNF17Q9BXT8 1623 aaKnown RBP-0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 DUOX2Q9NRD8 1548 aa-0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 H0YGG7 62 aa-0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 ENHOQ6UWT2 76 aa-0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 KCNQ1DNQ9H478 68 aa-0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 AKAP13Q12802 2813 aa-0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 ABCA9Q8IUA7 1624 aa-0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 NSD1Q96L73 2696 aaPredicted RBP-0.02□□□□□ -2.41
GTF3C3-209ENST00000466862 DSTQ03001 7570 aaKnown RBP-0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 ACANP16112 2415 aa-0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 DEFB131BA0A096LNP1 70 aa-0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 PDCD5O14737 125 aa-0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 UBL5Q9BZL1 73 aa-0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 PKHD1P08F94 4074 aa-0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 THOC2Q8NI27 1593 aaKnown RBP-0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 ASXL1Q8IXJ9 1541 aa-0.03□□□□□ -2.41
GTF3C3-209ENST00000466862 PKD1P98161 4303 aa-0.04□□□□□ -2.42
GTF3C3-209ENST00000466862 ZC3H13Q5T200 1668 aaKnown RBP-0.04□□□□□ -2.42
GTF3C3-209ENST00000466862 PCNX1Q96RV3 2341 aa-0.04□□□□□ -2.42
GTF3C3-209ENST00000466862 MRPL33O75394 65 aaKnown RBP-0.04□□□□□ -2.42
GTF3C3-209ENST00000466862 IAPPP10997 89 aa-0.04□□□□□ -2.42
GTF3C3-209ENST00000466862 ATXN8Q156A1 80 aa-0.04□□□□□ -2.42
GTF3C3-209ENST00000466862 FLNBO75369 2602 aaKnown RBP-0.04□□□□□ -2.42
GTF3C3-209ENST00000466862 NHSQ6T4R5 1651 aa-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 TNRC18O15417 2968 aaPredicted RBP-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 DNMBPQ6XZF7 1577 aa-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 PDE4DIPQ5VU43 2346 aa-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 LYNX1G3V0Z9 82 aa-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 CRIP1P50238 77 aa-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 GNG13Q9P2W3 67 aa-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 FLNAP21333 2647 aaKnown RBP-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 MADDQ8WXG6 1647 aa-0.05□□□□□ -2.42
GTF3C3-209ENST00000466862 TENM2Q9NT68 2774 aa-0.06□□□□□ -2.42
GTF3C3-209ENST00000466862 FAT3Q8TDW7 4589 aa-0.06□□□□□ -2.42
GTF3C3-209ENST00000466862 ETDCA0A1B0GVM5 59 aa-0.06□□□□□ -2.42
GTF3C3-209ENST00000466862 DEFB130BP0DP73 79 aa-0.06□□□□□ -2.42
GTF3C3-209ENST00000466862 DEFB130AP0DP74 79 aa-0.06□□□□□ -2.42
GTF3C3-209ENST00000466862 KRTAP6-2Q3LI66 62 aa-0.06□□□□□ -2.42
GTF3C3-209ENST00000466862 LYSTQ99698 3801 aa-0.06□□□□□ -2.42
GTF3C3-209ENST00000466862 INO80Q9ULG1 1556 aaPredicted RBP-0.06□□□□□ -2.42
GTF3C3-209ENST00000466862 FLGP20930 4061 aaPredicted RBP-0.07□□□□□ -2.42
GTF3C3-209ENST00000466862 KIAA0586Q9BVV6 1533 aa-0.07□□□□□ -2.42
GTF3C3-209ENST00000466862 ZANQ9Y493 2812 aa-0.07□□□□□ -2.42
GTF3C3-209ENST00000466862 SVEP1Q4LDE5 3571 aa-0.07□□□□□ -2.42
GTF3C3-209ENST00000466862 PRRC2CQ9Y520 2896 aaKnown RBP-0.07□□□□□ -2.42
GTF3C3-209ENST00000466862 BPTFQ12830 3046 aa-0.07□□□□□ -2.42
GTF3C3-209ENST00000466862 DNAH9Q9NYC9 4486 aa-0.07□□□□□ -2.42
GTF3C3-209ENST00000466862 STAB1Q9NY15 2570 aa-0.07□□□□□ -2.42
GTF3C3-209ENST00000466862 MROH1Q8NDA8 1641 aa-0.08□□□□□ -2.42
GTF3C3-209ENST00000466862 DSPP15924 2871 aaKnown RBP-0.08□□□□□ -2.42
GTF3C3-209ENST00000466862 SPRR2AP35326 72 aa-0.08□□□□□ -2.42
GTF3C3-209ENST00000466862 HECTD1Q9ULT8 2610 aa-0.08□□□□□ -2.42
GTF3C3-209ENST00000466862 C3P01024 1663 aa-0.08□□□□□ -2.42
GTF3C3-209ENST00000466862 MAP1AP78559 2803 aaPredicted RBP-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 NBASA2RRP1 2371 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 MUC12Q9UKN1 5478 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 MUC2Q02817 5179 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 CREBBPQ92793 2442 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 DEFB106AQ8N104 65 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 ITSN2Q9NZM3 1697 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 EFCAB5A4FU69 1503 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 ABCC6O95255 1503 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 APOBP04114 4563 aaKnown RBP-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 CUBNO60494 3623 aa-0.09□□□□□ -2.42
GTF3C3-209ENST00000466862 HTTP42858 3142 aa-0.1□□□□□ -2.43
GTF3C3-209ENST00000466862 LINC01549A6NIU2 74 aa-0.1□□□□□ -2.43
GTF3C3-209ENST00000466862 PRLHP81277 87 aa-0.1□□□□□ -2.43
GTF3C3-209ENST00000466862 DEFB114Q30KQ6 69 aa-0.1□□□□□ -2.43
GTF3C3-209ENST00000466862 KRTAP6-1Q3LI64 71 aa-0.1□□□□□ -2.43
GTF3C3-209ENST00000466862 KMT2CQ8NEZ4 4911 aaKnown RBP-0.1□□□□□ -2.43
GTF3C3-209ENST00000466862 SPTBN4Q9H254 2564 aa-0.1□□□□□ -2.43
GTF3C3-209ENST00000466862 VPS13BQ7Z7G8 4022 aa-0.1□□□□□ -2.43
GTF3C3-209ENST00000466862 ANKRD36CQ5JPF3 1778 aa-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 SETD2Q9BYW2 2564 aaPredicted RBP-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 CCDC180Q9P1Z9 1646 aa-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 H3BNG1 76 aa-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 MINOS1Q5TGZ0 78 aa-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 S4R3F8 94 aa-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 ANK3Q12955 4377 aaKnown RBP-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 PKHD1L1Q86WI1 4243 aa-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 AKAP9Q99996 3911 aa-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 KIF1AQ12756 1690 aa-0.11□□□□□ -2.43
GTF3C3-209ENST00000466862 ZZEF1O43149 2961 aa-0.12□□□□□ -2.43
GTF3C3-209ENST00000466862 SPRR2EP22531 72 aa-0.12□□□□□ -2.43
GTF3C3-209ENST00000466862 RPS27P42677 84 aaKnown RBP-0.12□□□□□ -2.43
GTF3C3-209ENST00000466862 RPS27LQ71UM5 84 aaKnown RBP-0.12□□□□□ -2.43
GTF3C3-209ENST00000466862 PDZD2O15018 2839 aa-0.12□□□□□ -2.43
GTF3C3-209ENST00000466862 NF1P21359 2839 aa-0.12□□□□□ -2.43
GTF3C3-209ENST00000466862 DNAH6Q9C0G6 4158 aa-0.12□□□□□ -2.43
GTF3C3-209ENST00000466862 VPS13DQ5THJ4 4388 aa-0.12□□□□□ -2.43
GTF3C3-209ENST00000466862 ABCA6Q8N139 1617 aa-0.13□□□□□ -2.43
GTF3C3-209ENST00000466862 SACSQ9NZJ4 4579 aa-0.13□□□□□ -2.43
GTF3C3-209ENST00000466862 SRRM2Q9UQ35 2752 aaKnown RBP-0.13□□□□□ -2.43
GTF3C3-209ENST00000466862 C9orf92A6NGG3 77 aa-0.13□□□□□ -2.43
GTF3C3-209ENST00000466862 KRTAP19-7Q3SYF9 63 aa-0.13□□□□□ -2.43
GTF3C3-209ENST00000466862 NCBP2-AS2Q69YL0 99 aa-0.13□□□□□ -2.43
GTF3C3-209ENST00000466862 SONP18583 2426 aaKnown RBP-0.13□□□□□ -2.43
GTF3C3-209ENST00000466862 DNAH3Q8TD57 4116 aa-0.14□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms