RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 HRES1P13985 223 aa5.52□□□□□ -1.53
HPS4-209ENST00000466781 LCA10Q71F78 164 aa5.51□□□□□ -1.53
HPS4-209ENST00000466781 KTN1-AS1Q86SY8 53 aa5.51□□□□□ -1.53
HPS4-209ENST00000466781 MYO9AB2RTY4 2548 aa5.51□□□□□ -1.53
HPS4-209ENST00000466781 WIPF1O43516 503 aa5.5□□□□□ -1.53
HPS4-209ENST00000466781 S4R3F8 94 aa5.5□□□□□ -1.53
HPS4-209ENST00000466781 ZFYVE26Q68DK2 2539 aa5.5□□□□□ -1.53
HPS4-209ENST00000466781 CEP295Q9C0D2 2601 aa5.5□□□□□ -1.53
HPS4-209ENST00000466781 BOD1L1Q8NFC6 3051 aa5.48□□□□□ -1.53
HPS4-209ENST00000466781 H7BZZ5 65 aa5.48□□□□□ -1.53
HPS4-209ENST00000466781 Q1T7F1 81 aa5.48□□□□□ -1.53
HPS4-209ENST00000466781 SPTBN4Q9H254 2564 aa5.48□□□□□ -1.53
HPS4-209ENST00000466781 CHD8Q9HCK8 2581 aa5.48□□□□□ -1.53
HPS4-209ENST00000466781 TLN2Q9Y4G6 2542 aa5.47□□□□□ -1.53
HPS4-209ENST00000466781 ATMQ13315 3056 aa5.47□□□□□ -1.53
HPS4-209ENST00000466781 FAM229BQ4G0N7 80 aa5.47□□□□□ -1.53
HPS4-209ENST00000466781 PKD1L2Q7Z442 2459 aa5.47□□□□□ -1.53
HPS4-209ENST00000466781 A0A1B0GU33 70 aa5.46□□□□□ -1.53
HPS4-209ENST00000466781 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.46□□□□□ -1.54
HPS4-209ENST00000466781 CSAG1Q6PB30 78 aa5.45□□□□□ -1.54
HPS4-209ENST00000466781 ZCCHC13Q8WW36 166 aaKnown RBP5.44□□□□□ -1.54
HPS4-209ENST00000466781 CSMD1Q96PZ7 3565 aa5.43□□□□□ -1.54
HPS4-209ENST00000466781 ABCA12Q86UK0 2595 aa5.43□□□□□ -1.54
HPS4-209ENST00000466781 NBEAQ8NFP9 2946 aa5.42□□□□□ -1.54
HPS4-209ENST00000466781 ZZEF1O43149 2961 aa5.42□□□□□ -1.54
HPS4-209ENST00000466781 SEC61BP60468 96 aaKnown RBP5.41□□□□□ -1.54
HPS4-209ENST00000466781 LCE6AA0A183 80 aa5.41□□□□□ -1.54
HPS4-209ENST00000466781 ACANP16112 2415 aa5.41□□□□□ -1.54
HPS4-209ENST00000466781 DMAC1Q96GE9 116 aa5.4□□□□□ -1.54
HPS4-209ENST00000466781 POLQO75417 2590 aa5.4□□□□□ -1.54
HPS4-209ENST00000466781 PLAC8Q9NZF1 115 aa5.4□□□□□ -1.54
HPS4-209ENST00000466781 KALRNO60229 2985 aa5.4□□□□□ -1.54
HPS4-209ENST00000466781 SVEP1Q4LDE5 3571 aa5.39□□□□□ -1.55
HPS4-209ENST00000466781 DMXL2Q8TDJ6 3036 aa5.39□□□□□ -1.55
HPS4-209ENST00000466781 Q5VSD8 79 aa5.38□□□□□ -1.55
HPS4-209ENST00000466781 MGAQ8IWI9 3026 aa5.38□□□□□ -1.55
HPS4-209ENST00000466781 R4GN34 69 aa5.37□□□□□ -1.55
HPS4-209ENST00000466781 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
HPS4-209ENST00000466781 FASNP49327 2511 aaKnown RBP5.36□□□□□ -1.55
HPS4-209ENST00000466781 NBPF19A0A087WUL8 3843 aa5.36□□□□□ -1.55
HPS4-209ENST00000466781 CSMD2Q7Z408 3487 aa5.34□□□□□ -1.55
HPS4-209ENST00000466781 MMP24-AS1A0A0U1RRL7 71 aa5.33□□□□□ -1.56
HPS4-209ENST00000466781 Q75L30 129 aa5.33□□□□□ -1.56
HPS4-209ENST00000466781 KRTAP21-3Q3LHN1 58 aa5.32□□□□□ -1.56
HPS4-209ENST00000466781 USP9XQ93008 2570 aaPredicted RBP5.32□□□□□ -1.56
HPS4-209ENST00000466781 SPINK7P58062 85 aa5.31□□□□□ -1.56
HPS4-209ENST00000466781 Q5W150 140 aa5.31□□□□□ -1.56
HPS4-209ENST00000466781 Q8N9P0 234 aaPredicted RBP5.31□□□□□ -1.56
HPS4-209ENST00000466781 MTORP42345 2549 aa5.3□□□□□ -1.56
HPS4-209ENST00000466781 PLAC4Q8WY50 150 aa5.3□□□□□ -1.56
HPS4-209ENST00000466781 AKAP13Q12802 2813 aa5.29□□□□□ -1.56
HPS4-209ENST00000466781 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
HPS4-209ENST00000466781 LINC01558Q9Y6Z2 57 aa5.29□□□□□ -1.56
HPS4-209ENST00000466781 OXTP01178 125 aa5.27□□□□□ -1.57
HPS4-209ENST00000466781 DCHS2Q6V1P9 2916 aa5.27□□□□□ -1.57
HPS4-209ENST00000466781 DSPP15924 2871 aaKnown RBP5.27□□□□□ -1.57
HPS4-209ENST00000466781 M0QZ58 72 aa5.27□□□□□ -1.57
HPS4-209ENST00000466781 SPRR1AP35321 89 aa5.25□□□□□ -1.57
HPS4-209ENST00000466781 CUBNO60494 3623 aa5.24□□□□□ -1.57
HPS4-209ENST00000466781 KRTAP1-5Q9BYS1 174 aa5.24□□□□□ -1.57
HPS4-209ENST00000466781 USP9YO00507 2555 aaPredicted RBP5.23□□□□□ -1.57
HPS4-209ENST00000466781 KRTAP10-1P60331 282 aa5.23□□□□□ -1.57
HPS4-209ENST00000466781 FP248Q71RG6 208 aaPredicted RBP5.23□□□□□ -1.57
HPS4-209ENST00000466781 ZNF469Q96JG9 3925 aaPredicted RBP5.23□□□□□ -1.57
HPS4-209ENST00000466781 SPRR1BP22528 89 aa5.23□□□□□ -1.57
HPS4-209ENST00000466781 HECTD1Q9ULT8 2610 aa5.23□□□□□ -1.57
HPS4-209ENST00000466781 COL12A1Q99715 3063 aa5.22□□□□□ -1.57
HPS4-209ENST00000466781 SETD2Q9BYW2 2564 aaPredicted RBP5.22□□□□□ -1.57
HPS4-209ENST00000466781 KRTAP10-2P60368 255 aa5.22□□□□□ -1.57
HPS4-209ENST00000466781 ROMO1P60602 79 aa5.21□□□□□ -1.57
HPS4-209ENST00000466781 RPL37P61927 97 aaKnown RBP5.21□□□□□ -1.57
HPS4-209ENST00000466781 Q8NDZ9 215 aa5.21□□□□□ -1.58
HPS4-209ENST00000466781 LINC00472Q9H8W2 130 aa5.21□□□□□ -1.58
HPS4-209ENST00000466781 H1FX-AS1Q4G0G2 97 aa5.21□□□□□ -1.58
HPS4-209ENST00000466781 ZNF292O60281 2723 aa5.21□□□□□ -1.58
HPS4-209ENST00000466781 PRRC2CQ9Y520 2896 aaKnown RBP5.2□□□□□ -1.58
HPS4-209ENST00000466781 ADM2Q7Z4H4 148 aa5.2□□□□□ -1.58
HPS4-209ENST00000466781 PRAC1Q96KF2 57 aa5.19□□□□□ -1.58
HPS4-209ENST00000466781 CRYBG3Q68DQ2 2970 aa5.18□□□□□ -1.58
HPS4-209ENST00000466781 AKAP9Q99996 3911 aa5.18□□□□□ -1.58
HPS4-209ENST00000466781 ITPR1Q14643 2758 aa5.17□□□□□ -1.58
HPS4-209ENST00000466781 KRTAP26-1Q6PEX3 210 aa5.17□□□□□ -1.58
HPS4-209ENST00000466781 EPG5Q9HCE0 2579 aa5.17□□□□□ -1.58
HPS4-209ENST00000466781 ADGRG4Q8IZF6 3080 aa5.16□□□□□ -1.58
HPS4-209ENST00000466781 FLG2Q5D862 2391 aaPredicted RBP5.16□□□□□ -1.58
HPS4-209ENST00000466781 Q6ZR54 194 aa5.16□□□□□ -1.58
HPS4-209ENST00000466781 ASH1LQ9NR48 2969 aaKnown RBP5.15□□□□□ -1.58
HPS4-209ENST00000466781 Q5VV11 94 aa5.15□□□□□ -1.59
HPS4-209ENST00000466781 CELSR1Q9NYQ6 3014 aa5.13□□□□□ -1.59
HPS4-209ENST00000466781 FLNAP21333 2647 aaKnown RBP5.12□□□□□ -1.59
HPS4-209ENST00000466781 ITPR3Q14573 2671 aa5.11□□□□□ -1.59
HPS4-209ENST00000466781 PANO1I0J062 215 aa5.1□□□□□ -1.59
HPS4-209ENST00000466781 CELSR2Q9HCU4 2923 aa5.1□□□□□ -1.59
HPS4-209ENST00000466781 HELZ2Q9BYK8 2649 aaKnown RBP5.09□□□□□ -1.59
HPS4-209ENST00000466781 SPATA8Q6RVD6 105 aa5.09□□□□□ -1.6
HPS4-209ENST00000466781 Q5XG85 94 aa5.08□□□□□ -1.6
HPS4-209ENST00000466781 LRBAP50851 2863 aa5.08□□□□□ -1.6
HPS4-209ENST00000466781 H3BS24 57 aa5.07□□□□□ -1.6
HPS4-209ENST00000466781 USP24Q9UPU5 2620 aa5.06□□□□□ -1.6
HPS4-209ENST00000466781 A0A087X002 238 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 348.2 ms