RNA–Protein interactions for RNA: ENST00000466525.1

GAPDH-206, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-206ENST00000466525 FAM30AQ9NZY2 134 aa9.6□□□□□ -0.87
GAPDH-206ENST00000466525 DNAH1Q9P2D7 4330 aa9.6□□□□□ -0.87
GAPDH-206ENST00000466525 IGLV8-61A0A075B6I0 122 aa9.59□□□□□ -0.87
GAPDH-206ENST00000466525 C11orf45Q8TAV5 145 aa9.59□□□□□ -0.87
GAPDH-206ENST00000466525 RPL37AP8A6NKH3 93 aa9.59□□□□□ -0.87
GAPDH-206ENST00000466525 ST20-AS1Q8NBB2 130 aa9.59□□□□□ -0.87
GAPDH-206ENST00000466525 HCG22E2RYF7 251 aa9.57□□□□□ -0.88
GAPDH-206ENST00000466525 K7EQZ3 153 aa9.56□□□□□ -0.88
GAPDH-206ENST00000466525 NDUFB1O75438 58 aa9.56□□□□□ -0.88
GAPDH-206ENST00000466525 REG3GQ6UW15 175 aa9.56□□□□□ -0.88
GAPDH-206ENST00000466525 DNAH7Q8WXX0 4024 aa9.56□□□□□ -0.88
GAPDH-206ENST00000466525 FAM168BA1KXE4 195 aa9.56□□□□□ -0.88
GAPDH-206ENST00000466525 Q1T7F1 81 aa9.56□□□□□ -0.88
GAPDH-206ENST00000466525 UBE2BP63146 152 aa9.54□□□□□ -0.88
GAPDH-206ENST00000466525 LINC00476Q8WZB0 136 aa9.54□□□□□ -0.88
GAPDH-206ENST00000466525 HUWE1Q7Z6Z7 4374 aaKnown RBP9.54□□□□□ -0.88
GAPDH-206ENST00000466525 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.53□□□□□ -0.88
GAPDH-206ENST00000466525 LINC00588Q9Y4M8 146 aa9.52□□□□□ -0.89
GAPDH-206ENST00000466525 PSCAO43653 123 aa9.51□□□□□ -0.89
GAPDH-206ENST00000466525 C1orf64Q8NEQ6 169 aa9.51□□□□□ -0.89
GAPDH-206ENST00000466525 MPLKIPQ8TAP9 179 aa9.51□□□□□ -0.89
GAPDH-206ENST00000466525 H3BPC8 53 aa9.51□□□□□ -0.89
GAPDH-206ENST00000466525 IGFL1Q6UW32 110 aa9.51□□□□□ -0.89
GAPDH-206ENST00000466525 BRK1Q8WUW1 75 aa9.51□□□□□ -0.89
GAPDH-206ENST00000466525 KRTAP17-1Q9BYP8 105 aa9.5□□□□□ -0.89
GAPDH-206ENST00000466525 LYSTQ99698 3801 aa9.5□□□□□ -0.89
GAPDH-206ENST00000466525 SPRR1BP22528 89 aa9.46□□□□□ -0.89
GAPDH-206ENST00000466525 MP68P56378 58 aa9.46□□□□□ -0.89
GAPDH-206ENST00000466525 KRTAP29-1A8MX34 341 aaPredicted RBP9.45□□□□□ -0.9
GAPDH-206ENST00000466525 C16orf90A8MZG2 172 aa9.45□□□□□ -0.9
GAPDH-206ENST00000466525 SPANXA2-OT1Q8N9U9 137 aa9.45□□□□□ -0.9
GAPDH-206ENST00000466525 V9GYY9 64 aa9.45□□□□□ -0.9
GAPDH-206ENST00000466525 H0Y9J4 135 aa9.45□□□□□ -0.9
GAPDH-206ENST00000466525 CNBPP62633 177 aaKnown RBP9.45□□□□□ -0.9
GAPDH-206ENST00000466525 TRAV22A0A0B4J277 110 aa9.43□□□□□ -0.9
GAPDH-206ENST00000466525 PRR15Q8IV56 129 aa9.42□□□□□ -0.9
GAPDH-206ENST00000466525 STARD9Q9P2P6 4700 aa9.41□□□□□ -0.9
GAPDH-206ENST00000466525 A0A087WSZ3 146 aa9.39□□□□□ -0.91
GAPDH-206ENST00000466525 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
GAPDH-206ENST00000466525 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
GAPDH-206ENST00000466525 A0A096LNI7 61 aa9.37□□□□□ -0.91
GAPDH-206ENST00000466525 CSMD3Q7Z407 3707 aa9.37□□□□□ -0.91
GAPDH-206ENST00000466525 A8MWP4 228 aa9.36□□□□□ -0.91
GAPDH-206ENST00000466525 UBE2AP49459 152 aa9.36□□□□□ -0.91
GAPDH-206ENST00000466525 HYDINQ4G0P3 5121 aa9.36□□□□□ -0.91
GAPDH-206ENST00000466525 WFDC13Q8IUB5 93 aa9.36□□□□□ -0.91
GAPDH-206ENST00000466525 LINC00472Q9H8W2 130 aa9.36□□□□□ -0.91
GAPDH-206ENST00000466525 A0A1W2PNN7 141 aa9.35□□□□□ -0.91
GAPDH-206ENST00000466525 PRLHP81277 87 aa9.35□□□□□ -0.91
GAPDH-206ENST00000466525 CASC2Q6XLA1 102 aa9.35□□□□□ -0.91
GAPDH-206ENST00000466525 C14orf177Q52M58 125 aa9.34□□□□□ -0.91
GAPDH-206ENST00000466525 LINC00208Q96KT6 92 aa9.34□□□□□ -0.92
GAPDH-206ENST00000466525 H0Y9P7 68 aa9.33□□□□□ -0.92
GAPDH-206ENST00000466525 C9orf163Q8N9P6 203 aa9.31□□□□□ -0.92
GAPDH-206ENST00000466525 A0A0G2JQZ4 141 aa9.31□□□□□ -0.92
GAPDH-206ENST00000466525 DEFB116Q30KQ4 102 aa9.3□□□□□ -0.92
GAPDH-206ENST00000466525 PLECQ15149 4684 aaKnown RBP9.29□□□□□ -0.92
GAPDH-206ENST00000466525 LIMD2Q9BT23 127 aa9.29□□□□□ -0.92
GAPDH-206ENST00000466525 ALMS1Q8TCU4 4167 aa9.29□□□□□ -0.92
GAPDH-206ENST00000466525 LRCOL1A6NCL2 159 aa9.28□□□□□ -0.92
GAPDH-206ENST00000466525 RPL37AP61513 92 aaKnown RBP9.28□□□□□ -0.92
GAPDH-206ENST00000466525 HERC2O95714 4834 aa9.27□□□□□ -0.93
GAPDH-206ENST00000466525 IGKV2-24A0A0C4DH68 120 aa9.27□□□□□ -0.93
GAPDH-206ENST00000466525 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
GAPDH-206ENST00000466525 MMP24-AS1A0A0U1RRL7 71 aa9.25□□□□□ -0.93
GAPDH-206ENST00000466525 LY6G6CO95867 125 aa9.25□□□□□ -0.93
GAPDH-206ENST00000466525 PRR4Q16378 134 aa9.25□□□□□ -0.93
GAPDH-206ENST00000466525 KRTAP1-5Q9BYS1 174 aa9.24□□□□□ -0.93
GAPDH-206ENST00000466525 TP53AIP1Q9HCN2 124 aa9.24□□□□□ -0.93
GAPDH-206ENST00000466525 IGLV7-46A0A075B6I9 117 aa9.23□□□□□ -0.93
GAPDH-206ENST00000466525 PSPHP1O15172 72 aa9.23□□□□□ -0.93
GAPDH-206ENST00000466525 KRTAP13-1Q8IUC0 172 aa9.23□□□□□ -0.93
GAPDH-206ENST00000466525 Q8N9P0 234 aaPredicted RBP9.23□□□□□ -0.93
GAPDH-206ENST00000466525 Q5VV11 94 aa9.22□□□□□ -0.93
GAPDH-206ENST00000466525 PHF5AQ7RTV0 110 aaKnown RBP9.22□□□□□ -0.93
GAPDH-206ENST00000466525 NUPR2A6NF83 97 aa9.22□□□□□ -0.93
GAPDH-206ENST00000466525 MOBPQ13875 183 aa9.22□□□□□ -0.93
GAPDH-206ENST00000466525 KRTAP11-1Q8IUC1 163 aa9.22□□□□□ -0.93
GAPDH-206ENST00000466525 A8MUN3 132 aa9.21□□□□□ -0.94
GAPDH-206ENST00000466525 FRAS1Q86XX4 4008 aa9.19□□□□□ -0.94
GAPDH-206ENST00000466525 LOC101927531A0A1B0GV80 90 aa9.18□□□□□ -0.94
GAPDH-206ENST00000466525 PMAIP1Q13794 54 aa9.18□□□□□ -0.94
GAPDH-206ENST00000466525 Q6ZR54 194 aa9.17□□□□□ -0.94
GAPDH-206ENST00000466525 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
GAPDH-206ENST00000466525 Q96NJ1 140 aa9.16□□□□□ -0.94
GAPDH-206ENST00000466525 LINC00483Q53H64 154 aa9.15□□□□□ -0.94
GAPDH-206ENST00000466525 Q75L30 129 aa9.15□□□□□ -0.94
GAPDH-206ENST00000466525 APLNQ9ULZ1 77 aa9.15□□□□□ -0.94
GAPDH-206ENST00000466525 CHTF8P0CG12 524 aa9.14□□□□□ -0.95
GAPDH-206ENST00000466525 COA5Q86WW8 74 aa9.14□□□□□ -0.95
GAPDH-206ENST00000466525 KMT2AQ03164 3969 aa9.13□□□□□ -0.95
GAPDH-206ENST00000466525 UBE2DNLQ8IWF7 75 aa9.12□□□□□ -0.95
GAPDH-206ENST00000466525 RYR1P21817 5038 aa9.12□□□□□ -0.95
GAPDH-206ENST00000466525 C8orf17Q9NRJ1 99 aa9.11□□□□□ -0.95
GAPDH-206ENST00000466525 DNAH10Q8IVF4 4471 aa9.11□□□□□ -0.95
GAPDH-206ENST00000466525 ZNF706Q9Y5V0 76 aaPredicted RBP9.09□□□□□ -0.95
GAPDH-206ENST00000466525 CHKB-CPT1BH3BT56 60 aa9.08□□□□□ -0.96
GAPDH-206ENST00000466525 SEC61GP60059 68 aa9.08□□□□□ -0.96
GAPDH-206ENST00000466525 PRR15LQ9BU68 103 aa9.08□□□□□ -0.96
GAPDH-206ENST00000466525 PLAC8Q9NZF1 115 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms