RNA–Protein interactions for RNA: ENST00000466454.1

CLCA3P-202, Transcript of chloride channel accessory 3, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene CLCA3P, Length 3,412 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3P-202ENST00000466454 CUBNO60494 3623 aa2.7□□□□□ -1.98
CLCA3P-202ENST00000466454 CASC2Q6XLA1 102 aa2.7□□□□□ -1.98
CLCA3P-202ENST00000466454 ITPR3Q14573 2671 aa2.7□□□□□ -1.98
CLCA3P-202ENST00000466454 CMYA5Q8N3K9 4069 aa2.7□□□□□ -1.98
CLCA3P-202ENST00000466454 LINC00483Q53H64 154 aa2.7□□□□□ -1.98
CLCA3P-202ENST00000466454 CLPSL2Q6UWE3 100 aa2.7□□□□□ -1.98
CLCA3P-202ENST00000466454 ZCCHC13Q8WW36 166 aaKnown RBP2.7□□□□□ -1.98
CLCA3P-202ENST00000466454 A0A087WSZ3 146 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 LCE3BQ5TA77 95 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 Q5W150 140 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 KLK12Q9UKR0 248 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 RTL8CO15255 209 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 NREPQ16612 68 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 DEFB135Q30KP9 77 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 C9orf163Q8N9P6 203 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 TYMSOSQ8TAI1 123 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 NBASA2RRP1 2371 aa2.69□□□□□ -1.98
CLCA3P-202ENST00000466454 IGLV10-54A0A075B6I4 117 aa2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 USP9YO00507 2555 aaPredicted RBP2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 Q6ZRX8 168 aa2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 TMEM254Q8TBM7 123 aa2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 SPTBN4Q9H254 2564 aa2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 DYNC2H1Q8NCM8 4307 aaKnown RBP2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 CSAG1Q6PB30 78 aa2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 KRTAP9-8Q9BYQ0 159 aa2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 KRTAP9-3Q9BYQ3 159 aa2.68□□□□□ -1.98
CLCA3P-202ENST00000466454 USP24Q9UPU5 2620 aa2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 CHKB-CPT1BH3BT56 60 aa2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 KPRPQ5T749 579 aaPredicted RBP2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 ANK2Q01484 3957 aa2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 A0A1W2PNM2 257 aa2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 HAMPP81172 84 aa2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 NCOR2Q9Y618 2525 aa2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 FAM168BA1KXE4 195 aa2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 CHD8Q9HCK8 2581 aa2.67□□□□□ -1.98
CLCA3P-202ENST00000466454 HIGD2BQ4VC39 106 aa2.66□□□□□ -1.98
CLCA3P-202ENST00000466454 WFDC10BQ8IUB3 73 aa2.66□□□□□ -1.98
CLCA3P-202ENST00000466454 SPRR1BP22528 89 aa2.66□□□□□ -1.98
CLCA3P-202ENST00000466454 KRTAP7-1Q8IUC3 87 aa2.66□□□□□ -1.98
CLCA3P-202ENST00000466454 Q9BRP9 147 aa2.66□□□□□ -1.98
CLCA3P-202ENST00000466454 KMT2BQ9UMN6 2715 aaPredicted RBP2.66□□□□□ -1.98
CLCA3P-202ENST00000466454 LCE1DQ5T752 114 aa2.65□□□□□ -1.98
CLCA3P-202ENST00000466454 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.98
CLCA3P-202ENST00000466454 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
CLCA3P-202ENST00000466454 A0A1B0GU33 70 aa2.65□□□□□ -1.99
CLCA3P-202ENST00000466454 CREBBPQ92793 2442 aa2.65□□□□□ -1.99
CLCA3P-202ENST00000466454 J3QKU1 62 aa2.65□□□□□ -1.99
CLCA3P-202ENST00000466454 DSCR10P59022 87 aa2.64□□□□□ -1.99
CLCA3P-202ENST00000466454 NAV2Q8IVL1 2488 aa2.64□□□□□ -1.99
CLCA3P-202ENST00000466454 NOTCH3Q9UM47 2321 aa2.64□□□□□ -1.99
CLCA3P-202ENST00000466454 SPG11Q96JI7 2443 aa2.64□□□□□ -1.99
CLCA3P-202ENST00000466454 KRTAP25-1Q3LHN0 102 aa2.64□□□□□ -1.99
CLCA3P-202ENST00000466454 DEFB4AO15263 64 aa2.64□□□□□ -1.99
CLCA3P-202ENST00000466454 CNBPP62633 177 aaKnown RBP2.64□□□□□ -1.99
CLCA3P-202ENST00000466454 DEFB116Q30KQ4 102 aa2.64□□□□□ -1.99
CLCA3P-202ENST00000466454 NIPBLQ6KC79 2804 aaeCLIP2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 PSCAO43653 123 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 KRTAP10-11P60412 298 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 ZNF462Q96JM2 2506 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 NF1P21359 2839 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 TENM4Q6N022 2769 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 ETDCA0A1B0GVM5 59 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 KRTAP29-1A8MX34 341 aaPredicted RBP2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 C1orf137Q5JT78 98 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 SNURFQ9Y675 71 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 MYO9AB2RTY4 2548 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 EPG5Q9HCE0 2579 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 CENPEQ02224 2701 aa2.63□□□□□ -1.99
CLCA3P-202ENST00000466454 PTPN13Q12923 2485 aa2.62□□□□□ -1.99
CLCA3P-202ENST00000466454 MYO18BQ8IUG5 2567 aa2.62□□□□□ -1.99
CLCA3P-202ENST00000466454 FLNAP21333 2647 aaKnown RBP2.62□□□□□ -1.99
CLCA3P-202ENST00000466454 LOC101927531A0A1B0GV80 90 aa2.62□□□□□ -1.99
CLCA3P-202ENST00000466454 ZNF861PO60384 105 aa2.62□□□□□ -1.99
CLCA3P-202ENST00000466454 NDUFB1O75438 58 aa2.62□□□□□ -1.99
CLCA3P-202ENST00000466454 LIMD2Q9BT23 127 aa2.62□□□□□ -1.99
CLCA3P-202ENST00000466454 WNK1Q9H4A3 2382 aa2.61□□□□□ -1.99
CLCA3P-202ENST00000466454 TLN2Q9Y4G6 2542 aa2.61□□□□□ -1.99
CLCA3P-202ENST00000466454 DEFB131BA0A096LNP1 70 aa2.61□□□□□ -1.99
CLCA3P-202ENST00000466454 RPL37AP61513 92 aaKnown RBP2.61□□□□□ -1.99
CLCA3P-202ENST00000466454 SMR3AQ99954 134 aa2.61□□□□□ -1.99
CLCA3P-202ENST00000466454 LRRK2Q5S007 2527 aa2.61□□□□□ -1.99
CLCA3P-202ENST00000466454 POLQO75417 2590 aa2.61□□□□□ -1.99
CLCA3P-202ENST00000466454 KRTAP24-1Q3LI83 254 aa2.6□□□□□ -1.99
CLCA3P-202ENST00000466454 HIGD2AQ9BW72 106 aa2.6□□□□□ -1.99
CLCA3P-202ENST00000466454 IGKV2D-24A0A075B6R9 120 aa2.59□□□□□ -1.99
CLCA3P-202ENST00000466454 ACACBO00763 2458 aa2.59□□□□□ -1.99
CLCA3P-202ENST00000466454 HTN3P15516 51 aa2.59□□□□□ -1.99
CLCA3P-202ENST00000466454 ST20-AS1Q8NBB2 130 aa2.59□□□□□ -1.99
CLCA3P-202ENST00000466454 TRRAPQ9Y4A5 3859 aa2.59□□□□□ -1.99
CLCA3P-202ENST00000466454 IGFL1Q6UW32 110 aa2.59□□□□□ -1.99
CLCA3P-202ENST00000466454 KRTAP13-1Q8IUC0 172 aa2.59□□□□□ -1.99
CLCA3P-202ENST00000466454 LINC00472Q9H8W2 130 aa2.59□□□□□ -1.99
CLCA3P-202ENST00000466454 K7EQZ3 153 aa2.59□□□□□ -2
CLCA3P-202ENST00000466454 IGLV7-43P04211 117 aa2.59□□□□□ -2
CLCA3P-202ENST00000466454 Q8N9L7 120 aa2.59□□□□□ -2
CLCA3P-202ENST00000466454 HIVEP1P15822 2718 aa2.58□□□□□ -2
CLCA3P-202ENST00000466454 VWFP04275 2813 aa2.58□□□□□ -2
CLCA3P-202ENST00000466454 JMJD1CQ15652 2540 aa2.58□□□□□ -2
CLCA3P-202ENST00000466454 HUWE1Q7Z6Z7 4374 aaKnown RBP2.58□□□□□ -2
CLCA3P-202ENST00000466454 ABCA12Q86UK0 2595 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms