RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 SMIM29Q86T20 159 aa8.41□□□□□ -1.06
UBE4B-206ENST00000466379 C3orf84H3BNL1 204 aa8.41□□□□□ -1.06
UBE4B-206ENST00000466379 HAMPP81172 84 aa8.41□□□□□ -1.06
UBE4B-206ENST00000466379 ALMS1Q8TCU4 4167 aa8.41□□□□□ -1.06
UBE4B-206ENST00000466379 UBE2AP49459 152 aa8.4□□□□□ -1.06
UBE4B-206ENST00000466379 HYDINQ4G0P3 5121 aa8.4□□□□□ -1.07
UBE4B-206ENST00000466379 DNAH8Q96JB1 4490 aa8.39□□□□□ -1.07
UBE4B-206ENST00000466379 A0A0G2JQZ4 141 aa8.39□□□□□ -1.07
UBE4B-206ENST00000466379 C1orf137Q5JT78 98 aa8.39□□□□□ -1.07
UBE4B-206ENST00000466379 SCXQ7RTU7 201 aa8.38□□□□□ -1.07
UBE4B-206ENST00000466379 SRRM2Q9UQ35 2752 aaKnown RBP8.38□□□□□ -1.07
UBE4B-206ENST00000466379 A0A1W2PNM2 257 aa8.38□□□□□ -1.07
UBE4B-206ENST00000466379 ATP5EP2Q5VTU8 51 aa8.38□□□□□ -1.07
UBE4B-206ENST00000466379 BCE1O60756 84 aa8.37□□□□□ -1.07
UBE4B-206ENST00000466379 FRAS1Q86XX4 4008 aa8.37□□□□□ -1.07
UBE4B-206ENST00000466379 DNAH5Q8TE73 4624 aa8.37□□□□□ -1.07
UBE4B-206ENST00000466379 DNAH11Q96DT5 4516 aa8.36□□□□□ -1.07
UBE4B-206ENST00000466379 H0Y9J4 135 aa8.36□□□□□ -1.07
UBE4B-206ENST00000466379 F8WEM9 126 aa8.35□□□□□ -1.07
UBE4B-206ENST00000466379 KRTAP10-2P60368 255 aa8.34□□□□□ -1.07
UBE4B-206ENST00000466379 KRTAP13-1Q8IUC0 172 aa8.34□□□□□ -1.07
UBE4B-206ENST00000466379 PRR26Q8N8Z3 221 aa8.34□□□□□ -1.07
UBE4B-206ENST00000466379 CCDC179H3BU77 68 aa8.34□□□□□ -1.07
UBE4B-206ENST00000466379 PLAC8Q9NZF1 115 aa8.33□□□□□ -1.08
UBE4B-206ENST00000466379 Q8NBF4 154 aa8.33□□□□□ -1.08
UBE4B-206ENST00000466379 NREPQ16612 68 aa8.32□□□□□ -1.08
UBE4B-206ENST00000466379 IGFL1Q6UW32 110 aa8.32□□□□□ -1.08
UBE4B-206ENST00000466379 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
UBE4B-206ENST00000466379 CXCL6P80162 114 aa8.31□□□□□ -1.08
UBE4B-206ENST00000466379 PRO0628Q9UI54 55 aa8.31□□□□□ -1.08
UBE4B-206ENST00000466379 FAT2Q9NYQ8 4349 aa8.3□□□□□ -1.08
UBE4B-206ENST00000466379 SPRR1BP22528 89 aa8.29□□□□□ -1.08
UBE4B-206ENST00000466379 Q8N9L7 120 aa8.29□□□□□ -1.08
UBE4B-206ENST00000466379 FAM30AQ9NZY2 134 aa8.29□□□□□ -1.08
UBE4B-206ENST00000466379 SPRR4Q96PI1 79 aa8.28□□□□□ -1.08
UBE4B-206ENST00000466379 ATOX1O00244 68 aa8.28□□□□□ -1.08
UBE4B-206ENST00000466379 IGLV8-61A0A075B6I0 122 aa8.27□□□□□ -1.09
UBE4B-206ENST00000466379 PKD1P98161 4303 aa8.27□□□□□ -1.09
UBE4B-206ENST00000466379 C1orf195Q5TG92 126 aa8.26□□□□□ -1.09
UBE4B-206ENST00000466379 BPY2O14599 106 aa8.26□□□□□ -1.09
UBE4B-206ENST00000466379 CRYGAP11844 174 aa8.26□□□□□ -1.09
UBE4B-206ENST00000466379 SACSQ9NZJ4 4579 aa8.25□□□□□ -1.09
UBE4B-206ENST00000466379 CIRBP-AS1Q8TBR5 109 aa8.24□□□□□ -1.09
UBE4B-206ENST00000466379 A0A1B0GW54 56 aa8.23□□□□□ -1.09
UBE4B-206ENST00000466379 CD164Q04900 197 aa8.23□□□□□ -1.09
UBE4B-206ENST00000466379 KRTAP10-1P60331 282 aa8.23□□□□□ -1.09
UBE4B-206ENST00000466379 A0A087WSZ3 146 aa8.22□□□□□ -1.09
UBE4B-206ENST00000466379 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
UBE4B-206ENST00000466379 IGKV4-1P06312 121 aa8.22□□□□□ -1.09
UBE4B-206ENST00000466379 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
UBE4B-206ENST00000466379 ZNF861PO60384 105 aa8.21□□□□□ -1.1
UBE4B-206ENST00000466379 COX7CP15954 63 aa8.21□□□□□ -1.1
UBE4B-206ENST00000466379 DEFB116Q30KQ4 102 aa8.2□□□□□ -1.1
UBE4B-206ENST00000466379 UQCRQO14949 82 aa8.19□□□□□ -1.1
UBE4B-206ENST00000466379 C9orf153Q5TBE3 101 aa8.19□□□□□ -1.1
UBE4B-206ENST00000466379 SERP2Q8N6R1 65 aa8.19□□□□□ -1.1
UBE4B-206ENST00000466379 IGLV7-43P04211 117 aa8.18□□□□□ -1.1
UBE4B-206ENST00000466379 LINC00483Q53H64 154 aa8.18□□□□□ -1.1
UBE4B-206ENST00000466379 DSCR10P59022 87 aa8.17□□□□□ -1.1
UBE4B-206ENST00000466379 LRP1BQ9NZR2 4599 aa8.17□□□□□ -1.1
UBE4B-206ENST00000466379 ZNF706Q9Y5V0 76 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-206ENST00000466379 Q6ZSA8 131 aa8.16□□□□□ -1.1
UBE4B-206ENST00000466379 K7EQZ3 153 aa8.15□□□□□ -1.1
UBE4B-206ENST00000466379 MOBPQ13875 183 aa8.14□□□□□ -1.11
UBE4B-206ENST00000466379 HRCT1Q6UXD1 115 aa8.14□□□□□ -1.11
UBE4B-206ENST00000466379 FAM236DA0A1B0GTK5 79 aa8.13□□□□□ -1.11
UBE4B-206ENST00000466379 FAM236CP0DP71 79 aa8.13□□□□□ -1.11
UBE4B-206ENST00000466379 CYSTM1Q9H1C7 97 aa8.13□□□□□ -1.11
UBE4B-206ENST00000466379 RPL37AP61513 92 aaKnown RBP8.12□□□□□ -1.11
UBE4B-206ENST00000466379 LCE6AA0A183 80 aa8.11□□□□□ -1.11
UBE4B-206ENST00000466379 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
UBE4B-206ENST00000466379 PKHD1P08F94 4074 aa8.09□□□□□ -1.11
UBE4B-206ENST00000466379 J3KT08 172 aa8.08□□□□□ -1.12
UBE4B-206ENST00000466379 LINC00472Q9H8W2 130 aa8.07□□□□□ -1.12
UBE4B-206ENST00000466379 C20orf197Q8N268 126 aa8.06□□□□□ -1.12
UBE4B-206ENST00000466379 DYNC1H1Q14204 4646 aaKnown RBP8.05□□□□□ -1.12
UBE4B-206ENST00000466379 RYR2Q92736 4967 aa8.04□□□□□ -1.12
UBE4B-206ENST00000466379 HCG22E2RYF7 251 aa8.03□□□□□ -1.12
UBE4B-206ENST00000466379 WFDC13Q8IUB5 93 aa8.03□□□□□ -1.12
UBE4B-206ENST00000466379 OCR1Q9BZK8 76 aa8.03□□□□□ -1.12
UBE4B-206ENST00000466379 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.13
UBE4B-206ENST00000466379 KMT2CQ8NEZ4 4911 aaKnown RBP8.02□□□□□ -1.13
UBE4B-206ENST00000466379 Q96NJ1 140 aa8.01□□□□□ -1.13
UBE4B-206ENST00000466379 SNURFQ9Y675 71 aa8.01□□□□□ -1.13
UBE4B-206ENST00000466379 PLA2G1BP04054 148 aaKnown RBP8.01□□□□□ -1.13
UBE4B-206ENST00000466379 A8MWP4 228 aa8□□□□□ -1.13
UBE4B-206ENST00000466379 A0A087X002 238 aa8□□□□□ -1.13
UBE4B-206ENST00000466379 PRR15Q8IV56 129 aa7.99□□□□□ -1.13
UBE4B-206ENST00000466379 A0A1B0GVY2 172 aa7.99□□□□□ -1.13
UBE4B-206ENST00000466379 RPS28P62857 69 aaKnown RBP7.97□□□□□ -1.13
UBE4B-206ENST00000466379 PMAIP1Q13794 54 aa7.97□□□□□ -1.13
UBE4B-206ENST00000466379 KRTAP13-2Q52LG2 175 aa7.96□□□□□ -1.13
UBE4B-206ENST00000466379 SMR3BP02814 79 aaPredicted RBP7.95□□□□□ -1.14
UBE4B-206ENST00000466379 TMEM254Q8TBM7 123 aa7.95□□□□□ -1.14
UBE4B-206ENST00000466379 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
UBE4B-206ENST00000466379 APOBP04114 4563 aaKnown RBP7.94□□□□□ -1.14
UBE4B-206ENST00000466379 KRTAP29-1A8MX34 341 aaPredicted RBP7.94□□□□□ -1.14
UBE4B-206ENST00000466379 KRTAP1-4P0C5Y4 121 aa7.94□□□□□ -1.14
UBE4B-206ENST00000466379 CASC2Q6XLA1 102 aa7.94□□□□□ -1.14
UBE4B-206ENST00000466379 SSBP3-AS1Q7Z2R9 100 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms