RNA–Protein interactions for RNA: ENST00000465703.5

SKIV2L-204, Transcript of Ski2 like RNA helicase, humanhuman

TSL 1 (best)

Gene SKIV2L, Length 4,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-204ENST00000465703 KRTAP4-16G5E9R7 235 aaPredicted RBP9.3□□□□□ -0.92
SKIV2L-204ENST00000465703 LCE6AA0A183 80 aa9.29□□□□□ -0.92
SKIV2L-204ENST00000465703 Q6ZR54 194 aa9.28□□□□□ -0.92
SKIV2L-204ENST00000465703 MAST4O15021 2626 aa9.26□□□□□ -0.93
SKIV2L-204ENST00000465703 Q5W150 140 aa9.26□□□□□ -0.93
SKIV2L-204ENST00000465703 UNC79Q9P2D8 2635 aa9.26□□□□□ -0.93
SKIV2L-204ENST00000465703 H3BS24 57 aa9.25□□□□□ -0.93
SKIV2L-204ENST00000465703 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
SKIV2L-204ENST00000465703 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.24□□□□□ -0.93
SKIV2L-204ENST00000465703 DMAC1Q96GE9 116 aa9.23□□□□□ -0.93
SKIV2L-204ENST00000465703 PLAC8Q9NZF1 115 aa9.23□□□□□ -0.93
SKIV2L-204ENST00000465703 HTTP42858 3142 aa9.23□□□□□ -0.93
SKIV2L-204ENST00000465703 GCN1Q92616 2671 aaKnown RBP9.23□□□□□ -0.93
SKIV2L-204ENST00000465703 CSAG1Q6PB30 78 aa9.21□□□□□ -0.94
SKIV2L-204ENST00000465703 A0A0D9SG42 100 aa9.19□□□□□ -0.94
SKIV2L-204ENST00000465703 CFAP46Q8IYW2 2715 aa9.18□□□□□ -0.94
SKIV2L-204ENST00000465703 ZNF292O60281 2723 aa9.16□□□□□ -0.94
SKIV2L-204ENST00000465703 HELZ2Q9BYK8 2649 aaKnown RBP9.16□□□□□ -0.94
SKIV2L-204ENST00000465703 MGAQ8IWI9 3026 aa9.14□□□□□ -0.95
SKIV2L-204ENST00000465703 LINC00483Q53H64 154 aa9.13□□□□□ -0.95
SKIV2L-204ENST00000465703 LUZP6Q538Z0 58 aa9.13□□□□□ -0.95
SKIV2L-204ENST00000465703 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
SKIV2L-204ENST00000465703 A6NN06 94 aa9.12□□□□□ -0.95
SKIV2L-204ENST00000465703 SPATA8Q6RVD6 105 aa9.1□□□□□ -0.95
SKIV2L-204ENST00000465703 NOTCH1P46531 2555 aa9.09□□□□□ -0.95
SKIV2L-204ENST00000465703 LAMA2P24043 3122 aaKnown RBP9.08□□□□□ -0.96
SKIV2L-204ENST00000465703 STAB1Q9NY15 2570 aa9.04□□□□□ -0.96
SKIV2L-204ENST00000465703 RANBP2P49792 3224 aaKnown RBP9.04□□□□□ -0.96
SKIV2L-204ENST00000465703 KRTAP1-5Q9BYS1 174 aa9.02□□□□□ -0.97
SKIV2L-204ENST00000465703 NBEAL2Q6ZNJ1 2754 aa9.01□□□□□ -0.97
SKIV2L-204ENST00000465703 SMR3BP02814 79 aaPredicted RBP8.99□□□□□ -0.97
SKIV2L-204ENST00000465703 RPL37P61927 97 aaKnown RBP8.99□□□□□ -0.97
SKIV2L-204ENST00000465703 A0A087X002 238 aa8.98□□□□□ -0.97
SKIV2L-204ENST00000465703 TEX15Q9BXT5 2789 aa8.97□□□□□ -0.97
SKIV2L-204ENST00000465703 ROMO1P60602 79 aa8.97□□□□□ -0.97
SKIV2L-204ENST00000465703 H1FX-AS1Q4G0G2 97 aa8.95□□□□□ -0.98
SKIV2L-204ENST00000465703 FRYQ5TBA9 3013 aa8.95□□□□□ -0.98
SKIV2L-204ENST00000465703 COL6A5A8TX70 2615 aa8.93□□□□□ -0.98
SKIV2L-204ENST00000465703 MAP1AP78559 2803 aaPredicted RBP8.92□□□□□ -0.98
SKIV2L-204ENST00000465703 COX6B2Q6YFQ2 88 aa8.92□□□□□ -0.98
SKIV2L-204ENST00000465703 SETXQ7Z333 2677 aaKnown RBP8.91□□□□□ -0.98
SKIV2L-204ENST00000465703 DSPP15924 2871 aaKnown RBP8.9□□□□□ -0.98
SKIV2L-204ENST00000465703 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.98
SKIV2L-204ENST00000465703 WDFY4Q6ZS81 3184 aa8.9□□□□□ -0.99
SKIV2L-204ENST00000465703 TEP1Q99973 2627 aaKnown RBP8.89□□□□□ -0.99
SKIV2L-204ENST00000465703 FLG2Q5D862 2391 aaPredicted RBP8.89□□□□□ -0.99
SKIV2L-204ENST00000465703 S4R3F8 94 aa8.87□□□□□ -0.99
SKIV2L-204ENST00000465703 A0A0A0MQY5 61 aa8.86□□□□□ -0.99
SKIV2L-204ENST00000465703 MKI67P46013 3256 aaKnown RBP8.85□□□□□ -0.99
SKIV2L-204ENST00000465703 TRIOO75962 3097 aa8.85□□□□□ -0.99
SKIV2L-204ENST00000465703 KRTAP7-1Q8IUC3 87 aa8.85□□□□□ -0.99
SKIV2L-204ENST00000465703 VPS13AQ96RL7 3174 aa8.85□□□□□ -0.99
SKIV2L-204ENST00000465703 NBEAQ8NFP9 2946 aa8.84□□□□□ -0.99
SKIV2L-204ENST00000465703 Q6ZSA8 131 aa8.84□□□□□ -0.99
SKIV2L-204ENST00000465703 UBR5O95071 2799 aaPredicted RBP8.83□□□□□ -1
SKIV2L-204ENST00000465703 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
SKIV2L-204ENST00000465703 ITPR1Q14643 2758 aa8.82□□□□□ -1
SKIV2L-204ENST00000465703 CAMK2N1Q7Z7J9 78 aa8.81□□□□□ -1
SKIV2L-204ENST00000465703 PANO1I0J062 215 aa8.8□□□□□ -1
SKIV2L-204ENST00000465703 KRTAP25-1Q3LHN0 102 aa8.8□□□□□ -1
SKIV2L-204ENST00000465703 A8MU10 97 aa8.8□□□□□ -1
SKIV2L-204ENST00000465703 LAMA3Q16787 3333 aa8.77□□□□□ -1.01
SKIV2L-204ENST00000465703 J3QL48 77 aa8.77□□□□□ -1.01
SKIV2L-204ENST00000465703 KRTAP13-1Q8IUC0 172 aa8.77□□□□□ -1.01
SKIV2L-204ENST00000465703 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
SKIV2L-204ENST00000465703 KALRNO60229 2985 aa8.76□□□□□ -1.01
SKIV2L-204ENST00000465703 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
SKIV2L-204ENST00000465703 NSD1Q96L73 2696 aaPredicted RBP8.73□□□□□ -1.01
SKIV2L-204ENST00000465703 BAHCC1Q9P281 2608 aa8.71□□□□□ -1.01
SKIV2L-204ENST00000465703 IGSF10Q6WRI0 2623 aa8.71□□□□□ -1.01
SKIV2L-204ENST00000465703 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
SKIV2L-204ENST00000465703 ADM2Q7Z4H4 148 aa8.69□□□□□ -1.02
SKIV2L-204ENST00000465703 R4GN34 69 aa8.69□□□□□ -1.02
SKIV2L-204ENST00000465703 KRTAP10-1P60331 282 aa8.65□□□□□ -1.02
SKIV2L-204ENST00000465703 Q6ZRN7 208 aaPredicted RBP8.64□□□□□ -1.03
SKIV2L-204ENST00000465703 BRCA2P51587 3418 aa8.63□□□□□ -1.03
SKIV2L-204ENST00000465703 FREM2Q5SZK8 3169 aa8.63□□□□□ -1.03
SKIV2L-204ENST00000465703 KRTAP16-1A8MUX0 517 aa8.62□□□□□ -1.03
SKIV2L-204ENST00000465703 UNC80Q8N2C7 3258 aa8.61□□□□□ -1.03
SKIV2L-204ENST00000465703 KRTAP10-2P60368 255 aa8.61□□□□□ -1.03
SKIV2L-204ENST00000465703 PRUNE2Q8WUY3 3088 aa8.59□□□□□ -1.03
SKIV2L-204ENST00000465703 FLNCQ14315 2725 aa8.59□□□□□ -1.03
SKIV2L-204ENST00000465703 APCP25054 2843 aa8.57□□□□□ -1.04
SKIV2L-204ENST00000465703 ADGRG4Q8IZF6 3080 aa8.56□□□□□ -1.04
SKIV2L-204ENST00000465703 NIPBLQ6KC79 2804 aaeCLIP8.54□□□□□ -1.046e-6■□□□□ 8.4
SKIV2L-204ENST00000465703 ITPR2Q14571 2701 aa8.54□□□□□ -1.04
SKIV2L-204ENST00000465703 M0QZ58 72 aa8.53□□□□□ -1.04
SKIV2L-204ENST00000465703 KMT2BQ9UMN6 2715 aaPredicted RBP8.52□□□□□ -1.05
SKIV2L-204ENST00000465703 XIRP2A4UGR9 3374 aa8.51□□□□□ -1.05
SKIV2L-204ENST00000465703 KRTAP13-2Q52LG2 175 aa8.5□□□□□ -1.05
SKIV2L-204ENST00000465703 SEC61BP60468 96 aaKnown RBP8.49□□□□□ -1.05
SKIV2L-204ENST00000465703 ASH1LQ9NR48 2969 aaKnown RBP8.49□□□□□ -1.05
SKIV2L-204ENST00000465703 LAMA1P25391 3075 aa8.47□□□□□ -1.05
SKIV2L-204ENST00000465703 ATMQ13315 3056 aa8.47□□□□□ -1.05
SKIV2L-204ENST00000465703 UTP20O75691 2785 aaKnown RBP8.46□□□□□ -1.06
SKIV2L-204ENST00000465703 TACC2O95359 2948 aa8.44□□□□□ -1.06
SKIV2L-204ENST00000465703 LRBAP50851 2863 aa8.43□□□□□ -1.06
SKIV2L-204ENST00000465703 DMXL2Q8TDJ6 3036 aa8.43□□□□□ -1.06
SKIV2L-204ENST00000465703 CELSR3Q9NYQ7 3312 aa8.42□□□□□ -1.06
SKIV2L-204ENST00000465703 A8MUU9 505 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms