RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 CRCT1Q9UGL9 99 aa11.15□□□□□ -0.62
CSPG5-204ENST00000465441 RPL37P61927 97 aaKnown RBP11.14□□□□□ -0.63
CSPG5-204ENST00000465441 CFC1BP0CG36 223 aa11.12□□□□□ -0.63
CSPG5-204ENST00000465441 TCL1BO95988 128 aa11.11□□□□□ -0.63
CSPG5-204ENST00000465441 VAMP3Q15836 100 aa11.09□□□□□ -0.63
CSPG5-204ENST00000465441 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
CSPG5-204ENST00000465441 FSIP2Q5CZC0 6907 aa11.08□□□□□ -0.64
CSPG5-204ENST00000465441 SPATA45Q537H7 98 aa11.08□□□□□ -0.64
CSPG5-204ENST00000465441 LINC00575Q6W349 94 aa11.08□□□□□ -0.64
CSPG5-204ENST00000465441 HIST1H4GQ99525 98 aa11.08□□□□□ -0.64
CSPG5-204ENST00000465441 VAMP8Q9BV40 100 aa11.08□□□□□ -0.64
CSPG5-204ENST00000465441 F8WEM9 126 aa11.06□□□□□ -0.64
CSPG5-204ENST00000465441 LORP23490 312 aaPredicted RBP11.06□□□□□ -0.64
CSPG5-204ENST00000465441 C14orf144Q96I85 54 aa11.06□□□□□ -0.64
CSPG5-204ENST00000465441 HIGD1BQ9P298 99 aa11.06□□□□□ -0.64
CSPG5-204ENST00000465441 KRTAP10-6P60371 365 aaPredicted RBP11.05□□□□□ -0.64
CSPG5-204ENST00000465441 hADV29S1A0JD25 119 aa11.04□□□□□ -0.64
CSPG5-204ENST00000465441 Q6ZQY7 126 aa11.04□□□□□ -0.64
CSPG5-204ENST00000465441 Q6JHZ5 121 aa11.01□□□□□ -0.65
CSPG5-204ENST00000465441 IGFL1Q6UW32 110 aa11.01□□□□□ -0.65
CSPG5-204ENST00000465441 C2orf91Q6ZV80 131 aa11.01□□□□□ -0.65
CSPG5-204ENST00000465441 C12orf57Q99622 126 aa11.01□□□□□ -0.65
CSPG5-204ENST00000465441 M0R2T5 61 aa11□□□□□ -0.65
CSPG5-204ENST00000465441 TRBV7-7A0A0K0K1E9 115 aa10.99□□□□□ -0.65
CSPG5-204ENST00000465441 OCIAD2Q56VL3 154 aa10.99□□□□□ -0.65
CSPG5-204ENST00000465441 PYY3Q5JQD4 70 aa10.99□□□□□ -0.65
CSPG5-204ENST00000465441 COX6B2Q6YFQ2 88 aa10.99□□□□□ -0.65
CSPG5-204ENST00000465441 FLGP20930 4061 aaPredicted RBP10.98□□□□□ -0.65
CSPG5-204ENST00000465441 CLEC2BQ92478 149 aa10.98□□□□□ -0.65
CSPG5-204ENST00000465441 TMA7Q9Y2S6 64 aaKnown RBP10.97□□□□□ -0.65
CSPG5-204ENST00000465441 CFC1P0CG37 223 aa10.95□□□□□ -0.66
CSPG5-204ENST00000465441 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.95□□□□□ -0.66
CSPG5-204ENST00000465441 A0A0B4J2C4 111 aa10.94□□□□□ -0.66
CSPG5-204ENST00000465441 BVES-AS1Q5T3Y7 98 aa10.94□□□□□ -0.66
CSPG5-204ENST00000465441 CEND1Q8N111 149 aa10.92□□□□□ -0.66
CSPG5-204ENST00000465441 RAB37Q96AX2 223 aa10.91□□□□□ -0.66
CSPG5-204ENST00000465441 OBSCN-AS1Q96MR7 158 aa10.91□□□□□ -0.66
CSPG5-204ENST00000465441 SNHG12Q9BXW3 62 aa10.9□□□□□ -0.66
CSPG5-204ENST00000465441 ATP11AUNQ6ZP68 121 aa10.89□□□□□ -0.67
CSPG5-204ENST00000465441 Q75L30 129 aa10.89□□□□□ -0.67
CSPG5-204ENST00000465441 PPDPFLQ8WWR9 84 aa10.89□□□□□ -0.67
CSPG5-204ENST00000465441 TMEM238LA0A1B0GVL6 79 aa10.88□□□□□ -0.67
CSPG5-204ENST00000465441 A6NJY4 79 aa10.88□□□□□ -0.67
CSPG5-204ENST00000465441 H3BUT2 72 aa10.87□□□□□ -0.67
CSPG5-204ENST00000465441 LST1O00453 97 aa10.87□□□□□ -0.67
CSPG5-204ENST00000465441 FXYD2P54710 66 aa10.85□□□□□ -0.67
CSPG5-204ENST00000465441 Q6Q795 121 aa10.84□□□□□ -0.67
CSPG5-204ENST00000465441 HSD52Q0P140 79 aa10.83□□□□□ -0.68
CSPG5-204ENST00000465441 PRO1854Q9UHT4 67 aa10.83□□□□□ -0.68
CSPG5-204ENST00000465441 Q96NJ1 140 aa10.82□□□□□ -0.68
CSPG5-204ENST00000465441 H0YGX0 51 aa10.81□□□□□ -0.68
CSPG5-204ENST00000465441 UQCR10Q9UDW1 63 aa10.8□□□□□ -0.68
CSPG5-204ENST00000465441 FAM218AQ96MZ4 157 aa10.78□□□□□ -0.68
CSPG5-204ENST00000465441 SNCGO76070 127 aa10.76□□□□□ -0.69
CSPG5-204ENST00000465441 TEN1Q86WV5 123 aa10.76□□□□□ -0.69
CSPG5-204ENST00000465441 SS18L2Q9UHA2 77 aa10.76□□□□□ -0.69
CSPG5-204ENST00000465441 A0A1B0GX51 115 aa10.75□□□□□ -0.69
CSPG5-204ENST00000465441 NDUFV3P56181 108 aaKnown RBP10.75□□□□□ -0.69
CSPG5-204ENST00000465441 C20orf166-AS1Q96NR2 134 aa10.74□□□□□ -0.69
CSPG5-204ENST00000465441 TRIAP1O43715 76 aa10.73□□□□□ -0.69
CSPG5-204ENST00000465441 A8MUU9 505 aa10.72□□□□□ -0.69
CSPG5-204ENST00000465441 A0A087WSZ3 146 aa10.7□□□□□ -0.7
CSPG5-204ENST00000465441 K7ERJ3 54 aa10.7□□□□□ -0.7
CSPG5-204ENST00000465441 H3BMG7 143 aa10.68□□□□□ -0.7
CSPG5-204ENST00000465441 GHRHP01286 108 aa10.67□□□□□ -0.7
CSPG5-204ENST00000465441 FABP2P12104 132 aa10.65□□□□□ -0.7
CSPG5-204ENST00000465441 DSCR10P59022 87 aa10.65□□□□□ -0.7
CSPG5-204ENST00000465441 SMIM6P0DI80 62 aa10.63□□□□□ -0.71
CSPG5-204ENST00000465441 PSMB2P49721 201 aa10.63□□□□□ -0.71
CSPG5-204ENST00000465441 TRBV20-1A0A075B6N2 111 aa10.62□□□□□ -0.71
CSPG5-204ENST00000465441 A0A1W2PNM2 257 aa10.62□□□□□ -0.71
CSPG5-204ENST00000465441 COX6CP09669 75 aa10.62□□□□□ -0.71
CSPG5-204ENST00000465441 KRTAP9-8Q9BYQ0 159 aa10.62□□□□□ -0.71
CSPG5-204ENST00000465441 DNAL4O96015 105 aa10.59□□□□□ -0.71
CSPG5-204ENST00000465441 H3BQ85 93 aa10.58□□□□□ -0.72
CSPG5-204ENST00000465441 KRTAP16-1A8MUX0 517 aa10.57□□□□□ -0.72
CSPG5-204ENST00000465441 ORMDL1Q9P0S3 153 aa10.57□□□□□ -0.72
CSPG5-204ENST00000465441 LINC00313P59037 77 aa10.56□□□□□ -0.72
CSPG5-204ENST00000465441 SIGMAR1Q99720 223 aa10.56□□□□□ -0.72
CSPG5-204ENST00000465441 M0R143 59 aa10.54□□□□□ -0.72
CSPG5-204ENST00000465441 ANKRD29Q8N6D5 301 aa10.54□□□□□ -0.72
CSPG5-204ENST00000465441 IGKV4-1P06312 121 aa10.53□□□□□ -0.72
CSPG5-204ENST00000465441 TMEM256-PLSCR3K7ERE1 68 aa10.52□□□□□ -0.73
CSPG5-204ENST00000465441 TRACP01848 142 aa10.52□□□□□ -0.73
CSPG5-204ENST00000465441 TRBV7-4A0A0J9YYF1 115 aa10.51□□□□□ -0.73
CSPG5-204ENST00000465441 USH2AO75445 5202 aa10.5□□□□□ -0.73
CSPG5-204ENST00000465441 NOTCH2NLQ7Z3S9 236 aa10.5□□□□□ -0.73
CSPG5-204ENST00000465441 A0A1B0GV72 72 aa10.49□□□□□ -0.73
CSPG5-204ENST00000465441 SCGB1C2P0DMR2 95 aa10.48□□□□□ -0.73
CSPG5-204ENST00000465441 DEFB116Q30KQ4 102 aa10.48□□□□□ -0.73
CSPG5-204ENST00000465441 UBE2V1Q13404 147 aa10.47□□□□□ -0.73
CSPG5-204ENST00000465441 LOC105371267A0A1B0GV96 52 aa10.46□□□□□ -0.73
CSPG5-204ENST00000465441 LINC00472Q9H8W2 130 aa10.46□□□□□ -0.73
CSPG5-204ENST00000465441 FAM236DA0A1B0GTK5 79 aa10.45□□□□□ -0.74
CSPG5-204ENST00000465441 TSTD3H0UI37 97 aa10.45□□□□□ -0.74
CSPG5-204ENST00000465441 FAM236CP0DP71 79 aa10.45□□□□□ -0.74
CSPG5-204ENST00000465441 SSPOA2VEC9 5147 aa10.44□□□□□ -0.74
CSPG5-204ENST00000465441 HRES1P13985 223 aa10.43□□□□□ -0.74
CSPG5-204ENST00000465441 MPLKIPQ8TAP9 179 aa10.42□□□□□ -0.74
CSPG5-204ENST00000465441 MT2AP02795 61 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms