RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 C6orf99Q4VX62 202 aa3.77□□□□□ -1.81
SMC3-202ENST00000462899 PCP2Q8IVA1 136 aa3.77□□□□□ -1.81
SMC3-202ENST00000462899 LITAFQ99732 161 aa3.77□□□□□ -1.81
SMC3-202ENST00000462899 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
SMC3-202ENST00000462899 SPANXCQ9NY87 97 aa3.77□□□□□ -1.81
SMC3-202ENST00000462899 TRBV7-6A0A0J9YX20 115 aa3.76□□□□□ -1.81
SMC3-202ENST00000462899 A0A0J9YXY3 114 aa3.76□□□□□ -1.81
SMC3-202ENST00000462899 HRES1P13985 223 aa3.76□□□□□ -1.81
SMC3-202ENST00000462899 RHEBQ15382 184 aa3.76□□□□□ -1.81
SMC3-202ENST00000462899 SPANXDQ9BXN6 97 aa3.76□□□□□ -1.81
SMC3-202ENST00000462899 PAM16Q9Y3D7 125 aa3.76□□□□□ -1.81
SMC3-202ENST00000462899 TMEM218A2RU14 115 aa3.75□□□□□ -1.81
SMC3-202ENST00000462899 LINC00308Q8TCZ7 52 aa3.75□□□□□ -1.81
SMC3-202ENST00000462899 CHCHD1Q96BP2 118 aaKnown RBP3.75□□□□□ -1.81
SMC3-202ENST00000462899 TRAPPC1Q9Y5R8 145 aa3.75□□□□□ -1.81
SMC3-202ENST00000462899 KMT2DO14686 5537 aa3.74□□□□□ -1.81
SMC3-202ENST00000462899 TRBV7-7A0A0K0K1E9 115 aa3.74□□□□□ -1.81
SMC3-202ENST00000462899 IGFL1Q6UW32 110 aa3.74□□□□□ -1.81
SMC3-202ENST00000462899 OR13C6PQ8NH95 151 aa3.74□□□□□ -1.81
SMC3-202ENST00000462899 Q96NJ1 140 aa3.74□□□□□ -1.81
SMC3-202ENST00000462899 PLNP26678 52 aa3.73□□□□□ -1.81
SMC3-202ENST00000462899 A0A1B0GWB2 263 aa3.72□□□□□ -1.81
SMC3-202ENST00000462899 LGALS3P17931 250 aaKnown RBP3.72□□□□□ -1.81
SMC3-202ENST00000462899 UQCC3Q6UW78 93 aa3.72□□□□□ -1.81
SMC3-202ENST00000462899 FAM236DA0A1B0GTK5 79 aa3.71□□□□□ -1.82
SMC3-202ENST00000462899 TIMM17BO60830 172 aa3.71□□□□□ -1.82
SMC3-202ENST00000462899 FAM236CP0DP71 79 aa3.71□□□□□ -1.82
SMC3-202ENST00000462899 CLEC2BQ92478 149 aa3.71□□□□□ -1.82
SMC3-202ENST00000462899 E9PLD3 99 aa3.7□□□□□ -1.82
SMC3-202ENST00000462899 H0Y8G0 127 aa3.7□□□□□ -1.82
SMC3-202ENST00000462899 HERVK_113P61574 105 aa3.7□□□□□ -1.82
SMC3-202ENST00000462899 CLLU1Q5K131 121 aa3.7□□□□□ -1.82
SMC3-202ENST00000462899 NOTCH2NLQ7Z3S9 236 aa3.7□□□□□ -1.82
SMC3-202ENST00000462899 DPM2O94777 84 aa3.69□□□□□ -1.82
SMC3-202ENST00000462899 IGKCP01834 107 aa3.69□□□□□ -1.82
SMC3-202ENST00000462899 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
SMC3-202ENST00000462899 Q6JHZ5 121 aa3.69□□□□□ -1.82
SMC3-202ENST00000462899 LINC00518Q8N0U6 118 aa3.69□□□□□ -1.82
SMC3-202ENST00000462899 YPEL4Q96NS1 127 aa3.68□□□□□ -1.82
SMC3-202ENST00000462899 PMCHL2Q9BQD1 86 aa3.68□□□□□ -1.82
SMC3-202ENST00000462899 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
SMC3-202ENST00000462899 A4D1N5 150 aa3.67□□□□□ -1.82
SMC3-202ENST00000462899 LST1O00453 97 aa3.67□□□□□ -1.82
SMC3-202ENST00000462899 HSBP1O75506 76 aa3.67□□□□□ -1.82
SMC3-202ENST00000462899 LEPROTL1O95214 131 aa3.67□□□□□ -1.82
SMC3-202ENST00000462899 A8MWP4 228 aa3.65□□□□□ -1.83
SMC3-202ENST00000462899 F8WEM9 126 aa3.65□□□□□ -1.83
SMC3-202ENST00000462899 NHP2Q9NX24 153 aaKnown RBP3.65□□□□□ -1.83
SMC3-202ENST00000462899 TRAV13-2A0A0B4J235 113 aa3.64□□□□□ -1.83
SMC3-202ENST00000462899 DSCR10P59022 87 aa3.64□□□□□ -1.83
SMC3-202ENST00000462899 ZNF815PA8K554 130 aa3.63□□□□□ -1.83
SMC3-202ENST00000462899 SERF1AO75920 110 aa3.63□□□□□ -1.83
SMC3-202ENST00000462899 OCIAD2Q56VL3 154 aa3.63□□□□□ -1.83
SMC3-202ENST00000462899 TTTY13Q9BZ97 58 aa3.63□□□□□ -1.83
SMC3-202ENST00000462899 LINC00575Q6W349 94 aa3.62□□□□□ -1.83
SMC3-202ENST00000462899 Q6ZQY7 126 aa3.62□□□□□ -1.83
SMC3-202ENST00000462899 Q6ZVH6 145 aa3.62□□□□□ -1.83
SMC3-202ENST00000462899 SMIM11BQ8TCY0 68 aa3.62□□□□□ -1.83
SMC3-202ENST00000462899 HSPB8Q9UJY1 196 aa3.62□□□□□ -1.83
SMC3-202ENST00000462899 KRTAP2-3P0C7H8 128 aa3.61□□□□□ -1.83
SMC3-202ENST00000462899 KRTAP2-4Q9BYR9 128 aa3.61□□□□□ -1.83
SMC3-202ENST00000462899 SS18L2Q9UHA2 77 aa3.61□□□□□ -1.83
SMC3-202ENST00000462899 A6NDN8 102 aa3.6□□□□□ -1.83
SMC3-202ENST00000462899 FABP4P15090 132 aa3.6□□□□□ -1.83
SMC3-202ENST00000462899 H3BUT2 72 aa3.59□□□□□ -1.83
SMC3-202ENST00000462899 IFITM1P13164 125 aa3.59□□□□□ -1.83
SMC3-202ENST00000462899 hADV29S1A0JD25 119 aa3.58□□□□□ -1.84
SMC3-202ENST00000462899 SLC7A5P1Q8MH63 180 aa3.58□□□□□ -1.84
SMC3-202ENST00000462899 MTURNQ8N3F0 131 aa3.58□□□□□ -1.84
SMC3-202ENST00000462899 PPDPFLQ8WWR9 84 aa3.58□□□□□ -1.84
SMC3-202ENST00000462899 A6NN06 94 aa3.57□□□□□ -1.84
SMC3-202ENST00000462899 COLCA2A8K830 154 aa3.57□□□□□ -1.84
SMC3-202ENST00000462899 MT1BP07438 61 aa3.57□□□□□ -1.84
SMC3-202ENST00000462899 LINC00313P59037 77 aa3.57□□□□□ -1.84
SMC3-202ENST00000462899 LINC01545Q5VT33 79 aa3.57□□□□□ -1.84
SMC3-202ENST00000462899 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.57□□□□□ -1.84
SMC3-202ENST00000462899 TEN1Q86WV5 123 aa3.57□□□□□ -1.84
SMC3-202ENST00000462899 A0A087WSZ3 146 aa3.56□□□□□ -1.84
SMC3-202ENST00000462899 SYS1-DBNDD2H3BUS1 97 aa3.56□□□□□ -1.84
SMC3-202ENST00000462899 SCGB1D1O95968 90 aa3.56□□□□□ -1.84
SMC3-202ENST00000462899 TRGC2P03986 189 aa3.56□□□□□ -1.84
SMC3-202ENST00000462899 MUSTN1Q8IVN3 82 aa3.56□□□□□ -1.84
SMC3-202ENST00000462899 COPS9Q8WXC6 57 aa3.56□□□□□ -1.84
SMC3-202ENST00000462899 MT3P25713 68 aa3.55□□□□□ -1.84
SMC3-202ENST00000462899 SNAPINO95295 136 aa3.54□□□□□ -1.84
SMC3-202ENST00000462899 APOC3P02656 99 aa3.54□□□□□ -1.84
SMC3-202ENST00000462899 SPINK7P58062 85 aa3.53□□□□□ -1.84
SMC3-202ENST00000462899 KRTAP10-5P60370 271 aa3.53□□□□□ -1.84
SMC3-202ENST00000462899 VAMP3Q15836 100 aa3.53□□□□□ -1.84
SMC3-202ENST00000462899 SCGB1D4Q6XE38 83 aa3.53□□□□□ -1.84
SMC3-202ENST00000462899 SVBPQ8N300 66 aa3.53□□□□□ -1.84
SMC3-202ENST00000462899 SIGMAR1Q99720 223 aa3.53□□□□□ -1.84
SMC3-202ENST00000462899 KRTAP10-7P60409 375 aaPredicted RBP3.52□□□□□ -1.85
SMC3-202ENST00000462899 SNHG12Q9BXW3 62 aa3.52□□□□□ -1.85
SMC3-202ENST00000462899 A0A1W2PNM2 257 aa3.51□□□□□ -1.85
SMC3-202ENST00000462899 ZCCHC13Q8WW36 166 aaKnown RBP3.51□□□□□ -1.85
SMC3-202ENST00000462899 KRTAP19-8Q3LI54 63 aa3.5□□□□□ -1.85
SMC3-202ENST00000462899 PET117Q6UWS5 81 aa3.5□□□□□ -1.85
SMC3-202ENST00000462899 FAM218AQ96MZ4 157 aa3.5□□□□□ -1.85
SMC3-202ENST00000462899 IGKV4-1P06312 121 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms