RNA–Protein interactions for RNA: ENST00000462309.1

COL4A2-203, Transcript of collagen type IV alpha 2 chain, humanhuman

TSL 3

Gene COL4A2, Length 725 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-203ENST00000462309 CCL19Q99731 98 aa3.56□□□□□ -1.84
COL4A2-203ENST00000462309 C22orf24Q9Y442 160 aa3.56□□□□□ -1.84
COL4A2-203ENST00000462309 HIVEP1P15822 2718 aa3.56□□□□□ -1.84
COL4A2-203ENST00000462309 DCHS2Q6V1P9 2916 aa3.55□□□□□ -1.84
COL4A2-203ENST00000462309 IGLV1-51P01701 117 aa3.55□□□□□ -1.84
COL4A2-203ENST00000462309 PRB4P10163 310 aaPredicted RBP3.55□□□□□ -1.84
COL4A2-203ENST00000462309 RBM3P98179 157 aaKnown RBP3.55□□□□□ -1.84
COL4A2-203ENST00000462309 COX17Q14061 63 aa3.55□□□□□ -1.84
COL4A2-203ENST00000462309 SMIM11BQ8TCY0 68 aa3.55□□□□□ -1.84
COL4A2-203ENST00000462309 MTORP42345 2549 aa3.55□□□□□ -1.84
COL4A2-203ENST00000462309 TEP1Q99973 2627 aaKnown RBP3.55□□□□□ -1.84
COL4A2-203ENST00000462309 C2CD3Q4AC94 2353 aa3.54□□□□□ -1.84
COL4A2-203ENST00000462309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.54□□□□□ -1.84
COL4A2-203ENST00000462309 TRBV6-4A0A1B0GX49 114 aa3.54□□□□□ -1.84
COL4A2-203ENST00000462309 G3V318 75 aa3.54□□□□□ -1.84
COL4A2-203ENST00000462309 Q8N814 137 aa3.54□□□□□ -1.84
COL4A2-203ENST00000462309 HIVEP2P31629 2446 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 LRBAP50851 2863 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.53□□□□□ -1.84
COL4A2-203ENST00000462309 TRAV23DV6A0A075B6W5 121 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 A0A096LNT2 108 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 IGKV2-29A2NJV5 120 aaPredicted RBP3.53□□□□□ -1.84
COL4A2-203ENST00000462309 MIFP14174 115 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 LINC00158P58513 81 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 ROMO1P60602 79 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 KRTAP21-3Q3LHN1 58 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 ENHOQ6UWT2 76 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 CDC42SE2Q9NRR3 84 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 TLN2Q9Y4G6 2542 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 CR1P17927 2039 aa3.53□□□□□ -1.84
COL4A2-203ENST00000462309 FN1P02751 2386 aaKnown RBP3.52□□□□□ -1.85
COL4A2-203ENST00000462309 HRNRQ86YZ3 2850 aaPredicted RBP3.52□□□□□ -1.85
COL4A2-203ENST00000462309 CSMD1Q96PZ7 3565 aa3.52□□□□□ -1.85
COL4A2-203ENST00000462309 A0A087WVE0 104 aa3.52□□□□□ -1.85
COL4A2-203ENST00000462309 hDV103S1A0JD37 113 aa3.52□□□□□ -1.85
COL4A2-203ENST00000462309 SPINK13Q1W4C9 94 aa3.52□□□□□ -1.85
COL4A2-203ENST00000462309 DEFB114Q30KQ6 69 aa3.52□□□□□ -1.85
COL4A2-203ENST00000462309 OTOGQ6ZRI0 2925 aa3.52□□□□□ -1.85
COL4A2-203ENST00000462309 WNK2Q9Y3S1 2297 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 MUC4Q99102 2169 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 F8WEM9 126 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 LYNX1G3V0Z9 82 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 NCR3O14931 201 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 LYNX1P0DP58 116 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 CCL18P55774 89 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 C1orf134Q5TEV5 83 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 Q8IZM0 81 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 C20orf166-AS1Q96NR2 134 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 CYSTM1Q9H1C7 97 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 TACC2O95359 2948 aa3.51□□□□□ -1.85
COL4A2-203ENST00000462309 FLNAP21333 2647 aaKnown RBP3.51□□□□□ -1.85
COL4A2-203ENST00000462309 SONP18583 2426 aaKnown RBP3.5□□□□□ -1.85
COL4A2-203ENST00000462309 CSMD2Q7Z408 3487 aa3.5□□□□□ -1.85
COL4A2-203ENST00000462309 TRBV7-4A0A0J9YYF1 115 aa3.5□□□□□ -1.85
COL4A2-203ENST00000462309 COX6A2Q02221 97 aa3.5□□□□□ -1.85
COL4A2-203ENST00000462309 PRB3Q04118 309 aaPredicted RBP3.5□□□□□ -1.85
COL4A2-203ENST00000462309 SMR3AQ99954 134 aa3.5□□□□□ -1.85
COL4A2-203ENST00000462309 ABCA2Q9BZC7 2435 aa3.5□□□□□ -1.85
COL4A2-203ENST00000462309 ZNF469Q96JG9 3925 aaPredicted RBP3.5□□□□□ -1.85
COL4A2-203ENST00000462309 NDUFB1O75438 58 aa3.49□□□□□ -1.85
COL4A2-203ENST00000462309 NREPQ16612 68 aa3.49□□□□□ -1.85
COL4A2-203ENST00000462309 FP248Q71RG6 208 aaPredicted RBP3.49□□□□□ -1.85
COL4A2-203ENST00000462309 TMEM254Q8TBM7 123 aa3.49□□□□□ -1.85
COL4A2-203ENST00000462309 SETD2Q9BYW2 2564 aaPredicted RBP3.49□□□□□ -1.85
COL4A2-203ENST00000462309 IGKV3-7A0A075B6H7 116 aa3.48□□□□□ -1.85
COL4A2-203ENST00000462309 HAMPP81172 84 aa3.48□□□□□ -1.85
COL4A2-203ENST00000462309 Q1T7F1 81 aa3.48□□□□□ -1.85
COL4A2-203ENST00000462309 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.48□□□□□ -1.85
COL4A2-203ENST00000462309 LINC00575Q6W349 94 aa3.48□□□□□ -1.85
COL4A2-203ENST00000462309 JMJD1CQ15652 2540 aa3.48□□□□□ -1.85
COL4A2-203ENST00000462309 ARHGAP32A7KAX9 2087 aa3.48□□□□□ -1.85
COL4A2-203ENST00000462309 AKAP9Q99996 3911 aa3.48□□□□□ -1.85
COL4A2-203ENST00000462309 A6NN06 94 aa3.47□□□□□ -1.85
COL4A2-203ENST00000462309 BPESC1Q9GZL8 116 aa3.47□□□□□ -1.85
COL4A2-203ENST00000462309 TOMM7Q9P0U1 55 aa3.47□□□□□ -1.85
COL4A2-203ENST00000462309 MAP1AP78559 2803 aaPredicted RBP3.47□□□□□ -1.85
COL4A2-203ENST00000462309 H3BUX3 64 aa3.46□□□□□ -1.86
COL4A2-203ENST00000462309 COX7BP24311 80 aa3.46□□□□□ -1.86
COL4A2-203ENST00000462309 DEFB1P60022 68 aa3.46□□□□□ -1.86
COL4A2-203ENST00000462309 DEFB104AQ8WTQ1 72 aa3.46□□□□□ -1.86
COL4A2-203ENST00000462309 PSORS1C2Q9UIG4 136 aa3.46□□□□□ -1.86
COL4A2-203ENST00000462309 NSD1Q96L73 2696 aaPredicted RBP3.46□□□□□ -1.86
COL4A2-203ENST00000462309 ZFHX3Q15911 3703 aa3.45□□□□□ -1.86
COL4A2-203ENST00000462309 DEFB131AP59861 70 aa3.45□□□□□ -1.86
COL4A2-203ENST00000462309 ASB16-AS1Q495Z4 193 aa3.45□□□□□ -1.86
COL4A2-203ENST00000462309 TRGV1A0A0A0MS02 117 aa3.44□□□□□ -1.86
COL4A2-203ENST00000462309 TRBV6-8A0A0A6YYG3 113 aa3.44□□□□□ -1.86
COL4A2-203ENST00000462309 HTN1P15515 57 aa3.44□□□□□ -1.86
COL4A2-203ENST00000462309 Q9BRP9 147 aa3.44□□□□□ -1.86
COL4A2-203ENST00000462309 CYP4F30PQ9H0H9 118 aa3.44□□□□□ -1.86
COL4A2-203ENST00000462309 SNURFQ9Y675 71 aa3.44□□□□□ -1.86
COL4A2-203ENST00000462309 ZANQ9Y493 2812 aa3.44□□□□□ -1.86
COL4A2-203ENST00000462309 CELSR1Q9NYQ6 3014 aa3.44□□□□□ -1.86
COL4A2-203ENST00000462309 LCE6AA0A183 80 aa3.43□□□□□ -1.86
COL4A2-203ENST00000462309 LINC00959A0A1B0GUT2 108 aa3.43□□□□□ -1.86
COL4A2-203ENST00000462309 ELOF1P60002 83 aaKnown RBP3.43□□□□□ -1.86
COL4A2-203ENST00000462309 TRGV4A0A0C4DH28 118 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 LCE1CQ5T751 118 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
COL4A2-203ENST00000462309 ATP11AUNQ6ZP68 121 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms