RNA–Protein interactions for RNA: ENST00000462243.2

TRIT1-204, Transcript of tRNA isopentenyltransferase 1, humanhuman

TSL 5

Gene TRIT1, Length 550 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIT1-204ENST00000462243 CFAP54Q96N23 3096 aa0.37□□□□□ -2.35
TRIT1-204ENST00000462243 CFAP43Q8NDM7 1665 aa0.37□□□□□ -2.35
TRIT1-204ENST00000462243 DNMBPQ6XZF7 1577 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 NDUFB1O75438 58 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 DEFB112Q30KQ8 113 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 SPINK6Q6UWN8 80 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 USMG5Q96IX5 58 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 SPTBN1Q01082 2364 aaKnown RBP0.36□□□□□ -2.35
TRIT1-204ENST00000462243 WNK1Q9H4A3 2382 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 UGGT2Q9NYU1 1516 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 ARFGEF2Q9Y6D5 1785 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 HTTP42858 3142 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 TSC2P49815 1807 aa0.36□□□□□ -2.35
TRIT1-204ENST00000462243 DOT1LQ8TEK3 1739 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 FMN2Q9NZ56 1722 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 UBR3Q6ZT12 1888 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 CICQ96RK0 1608 aaPredicted RBP0.35□□□□□ -2.35
TRIT1-204ENST00000462243 EIF2AK4Q9P2K8 1649 aaKnown RBP0.35□□□□□ -2.35
TRIT1-204ENST00000462243 BCORQ6W2J9 1755 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 PTPRQQ9UMZ3 2332 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 PREX1Q8TCU6 1659 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 CFDP00746 253 aaPredicted RBP0.35□□□□□ -2.35
TRIT1-204ENST00000462243 COX6B1P14854 86 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 COX7BP24311 80 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 SMCO4Q9NRQ5 59 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 CSMD3Q7Z407 3707 aa0.35□□□□□ -2.35
TRIT1-204ENST00000462243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.35□□□□□ -2.35
TRIT1-204ENST00000462243 ZC3H13Q5T200 1668 aaKnown RBP0.34□□□□□ -2.35
TRIT1-204ENST00000462243 FXYD6-FXYD2A0A087WZ82 144 aa0.34□□□□□ -2.36
TRIT1-204ENST00000462243 TRAV21A0A0B4J279 112 aa0.34□□□□□ -2.36
TRIT1-204ENST00000462243 LCE6AA0A183 80 aa0.34□□□□□ -2.36
TRIT1-204ENST00000462243 COX8AP10176 69 aa0.34□□□□□ -2.36
TRIT1-204ENST00000462243 ADAMTS12P58397 1594 aa0.34□□□□□ -2.36
TRIT1-204ENST00000462243 GAFA1Q96PS6 74 aa0.34□□□□□ -2.36
TRIT1-204ENST00000462243 PARP4Q9UKK3 1724 aaKnown RBP0.34□□□□□ -2.36
TRIT1-204ENST00000462243 SPTA1P02549 2419 aa0.34□□□□□ -2.36
TRIT1-204ENST00000462243 DMXL2Q8TDJ6 3036 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 NWD1Q149M9 1564 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 ANKRD50Q9ULJ7 1429 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 SPTY2D1-AS1A0A0U1RR47 76 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 PDCD5O14737 125 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 SMIM13P0DJ93 91 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 IFI27P40305 119 aaPredicted RBP0.33□□□□□ -2.36
TRIT1-204ENST00000462243 CRIPTQ9P021 101 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 PLCH1Q4KWH8 1693 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 CUBNO60494 3623 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 TNCP24821 2201 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 DUOX2Q9NRD8 1548 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 ITSN1Q15811 1721 aa0.33□□□□□ -2.36
TRIT1-204ENST00000462243 SVEP1Q4LDE5 3571 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 AKAP6Q13023 2319 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 CLIP1P30622 1438 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 NESP48681 1621 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 FREM2Q5SZK8 3169 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 CPSF4LA6NMK7 179 aaKnown RBP0.32□□□□□ -2.36
TRIT1-204ENST00000462243 UMAD1C9J7I0 102 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 I3L3M4 83 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 HMGA1P17096 107 aaKnown RBP0.32□□□□□ -2.36
TRIT1-204ENST00000462243 SPRR1AP35321 89 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 RPL38P63173 70 aaKnown RBP0.32□□□□□ -2.36
TRIT1-204ENST00000462243 Q5BKY6 102 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 WFDC9Q8NEX5 89 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 WIZO95785 1651 aa0.32□□□□□ -2.36
TRIT1-204ENST00000462243 PKDREJQ9NTG1 2253 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 LOC400499M0QZD8 3231 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 NHSQ6T4R5 1651 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 TNRC6CQ9HCJ0 1690 aaKnown RBP0.31□□□□□ -2.36
TRIT1-204ENST00000462243 DNAH14Q0VDD8 3507 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 CCL22O00626 93 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 IFI6P09912 130 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 SPRR1BP22528 89 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 LELP1Q5T871 98 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 MRPL34Q9BQ48 92 aaKnown RBP0.31□□□□□ -2.36
TRIT1-204ENST00000462243 ERICH3Q5RHP9 1530 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 CSMD2Q7Z408 3487 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 CDC42BPGQ6DT37 1551 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 CHD9Q3L8U1 2897 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 ABCA9Q8IUA7 1624 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 MROH1Q8NDA8 1641 aa0.31□□□□□ -2.36
TRIT1-204ENST00000462243 SYNE1Q8NF91 8797 aaKnown RBP0.3□□□□□ -2.36
TRIT1-204ENST00000462243 RICTORQ6R327 1708 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 UTRNP46939 3433 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 EFCAB5A4FU69 1503 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 LMTK2Q8IWU2 1503 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 ASXL1Q8IXJ9 1541 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 TACC2O95359 2948 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 DCHS2Q6V1P9 2916 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 A0A087WXM4 84 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 DEFA5Q01523 94 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 NREPQ16612 68 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 HEPN1Q6WQI6 88 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 COX6B2Q6YFQ2 88 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 INO80Q9ULG1 1556 aaPredicted RBP0.3□□□□□ -2.36
TRIT1-204ENST00000462243 FRYLO94915 3013 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 RNF17Q9BXT8 1623 aaKnown RBP0.3□□□□□ -2.36
TRIT1-204ENST00000462243 DMXL1Q9Y485 3027 aa0.3□□□□□ -2.36
TRIT1-204ENST00000462243 SRRM2Q9UQ35 2752 aaKnown RBP0.29□□□□□ -2.36
TRIT1-204ENST00000462243 LAMA5O15230 3695 aa0.29□□□□□ -2.36
TRIT1-204ENST00000462243 KRTAP19-6Q3LI70 58 aa0.29□□□□□ -2.36
TRIT1-204ENST00000462243 DEFB105AQ8NG35 78 aa0.29□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms