RNA–Protein interactions for RNA: ENST00000461558.2

CFHR3-204, Transcript of complement factor H related 3, humanhuman

TSL 2

Gene CFHR3, Length 785 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-204ENST00000461558 H3BQ85 93 aa2.41□□□□□ -2.02
CFHR3-204ENST00000461558 M0R2N4 97 aa2.41□□□□□ -2.02
CFHR3-204ENST00000461558 ZNF73O43830 326 aaPredicted RBP2.41□□□□□ -2.02
CFHR3-204ENST00000461558 COX7BP24311 80 aa2.41□□□□□ -2.02
CFHR3-204ENST00000461558 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.41□□□□□ -2.02
CFHR3-204ENST00000461558 Q6ZQY7 126 aa2.41□□□□□ -2.02
CFHR3-204ENST00000461558 C3orf56Q8N813 242 aa2.41□□□□□ -2.02
CFHR3-204ENST00000461558 DIRC1Q969H9 104 aa2.41□□□□□ -2.02
CFHR3-204ENST00000461558 TM2D3Q9BRN9 247 aa2.41□□□□□ -2.02
CFHR3-204ENST00000461558 DNAH1Q9P2D7 4330 aa2.41□□□□□ -2.02
CFHR3-204ENST00000461558 IGKV2D-24A0A075B6R9 120 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 A0A087WVE0 104 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 TRAV10A0A0B4J240 114 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 TRBV7-4A0A0J9YYF1 115 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 K7EIL1 84 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 ATOX1O00244 68 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 TLX1NBP0CAT3 122 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 COX7CP15954 63 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 RBM3P98179 157 aaKnown RBP2.4□□□□□ -2.03
CFHR3-204ENST00000461558 SYCNQ0VAF6 134 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 CASC10Q5T4H9 136 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 ATP5EP2Q5VTU8 51 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 C3orf22Q8N5N4 141 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 SS18L2Q9UHA2 77 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 LINC00588Q9Y4M8 146 aa2.4□□□□□ -2.03
CFHR3-204ENST00000461558 UQCRQO14949 82 aa2.39□□□□□ -2.03
CFHR3-204ENST00000461558 C7orf33Q8WU49 177 aa2.39□□□□□ -2.03
CFHR3-204ENST00000461558 UPK3BQ9BT76 320 aa2.39□□□□□ -2.03
CFHR3-204ENST00000461558 KCNQ1DNQ9H478 68 aa2.39□□□□□ -2.03
CFHR3-204ENST00000461558 CRYGAP11844 174 aa2.38□□□□□ -2.03
CFHR3-204ENST00000461558 PDE6GP18545 87 aa2.38□□□□□ -2.03
CFHR3-204ENST00000461558 SPRR1AP35321 89 aa2.38□□□□□ -2.03
CFHR3-204ENST00000461558 FAM19A1Q7Z5A9 133 aa2.38□□□□□ -2.03
CFHR3-204ENST00000461558 UBL5Q9BZL1 73 aa2.38□□□□□ -2.03
CFHR3-204ENST00000461558 LAMTOR3Q9UHA4 124 aa2.38□□□□□ -2.03
CFHR3-204ENST00000461558 F8P00451 2351 aa2.38□□□□□ -2.03
CFHR3-204ENST00000461558 STAB1Q9NY15 2570 aa2.38□□□□□ -2.03
CFHR3-204ENST00000461558 DYNC2H1Q8NCM8 4307 aaKnown RBP2.38□□□□□ -2.03
CFHR3-204ENST00000461558 IGLV1-50A0A075B6I6 118 aa2.37□□□□□ -2.03
CFHR3-204ENST00000461558 SPRR5A0A1B0GTR4 108 aa2.37□□□□□ -2.03
CFHR3-204ENST00000461558 C9orf153Q5TBE3 101 aa2.37□□□□□ -2.03
CFHR3-204ENST00000461558 SERP2Q8N6R1 65 aa2.37□□□□□ -2.03
CFHR3-204ENST00000461558 DSCR8Q96T75 97 aa2.37□□□□□ -2.03
CFHR3-204ENST00000461558 CYSTM1Q9H1C7 97 aa2.37□□□□□ -2.03
CFHR3-204ENST00000461558 HUWE1Q7Z6Z7 4374 aaKnown RBP2.37□□□□□ -2.03
CFHR3-204ENST00000461558 FLNBO75369 2602 aaKnown RBP2.37□□□□□ -2.03
CFHR3-204ENST00000461558 IGLV5-48A0A075B6I7 105 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 LOC107984640A0A0U1RRK4 108 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 ZNF861PO60384 105 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 BCE1O60756 84 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 Q6ZRX8 168 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 NKAPP1Q8N9T2 125 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 RMI2Q96E14 147 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 Q9BRP9 147 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 COL7A1Q02388 2944 aa2.36□□□□□ -2.03
CFHR3-204ENST00000461558 APLNQ9ULZ1 77 aa2.35□□□□□ -2.03
CFHR3-204ENST00000461558 TRAV7A0A075B6U4 112 aa2.34□□□□□ -2.03
CFHR3-204ENST00000461558 ERC2-IT1O76042 136 aa2.34□□□□□ -2.03
CFHR3-204ENST00000461558 CNBPP62633 177 aaKnown RBP2.34□□□□□ -2.03
CFHR3-204ENST00000461558 HAMPP81172 84 aa2.34□□□□□ -2.03
CFHR3-204ENST00000461558 FAM19A5Q7Z5A7 132 aaPredicted RBP2.34□□□□□ -2.03
CFHR3-204ENST00000461558 MRPL55Q7Z7F7 128 aaKnown RBP2.34□□□□□ -2.03
CFHR3-204ENST00000461558 DNAH7Q8WXX0 4024 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 NBEAL1Q6ZS30 2694 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 A0A096LNI7 61 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 ETDCA0A1B0GVM5 59 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 A0A1B0GW54 56 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 A0A1W2PNM2 257 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 IGKV4-1P06312 121 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 SCXQ7RTU7 201 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 SMIM20Q8N5G0 67 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 ST20-AS1Q8NBB2 130 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 DEFB105AQ8NG35 78 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 SPRR4Q96PI1 79 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 LYSTQ99698 3801 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 DNAH9Q9NYC9 4486 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 CSMD3Q7Z407 3707 aa2.33□□□□□ -2.04
CFHR3-204ENST00000461558 NOTCH1P46531 2555 aa2.32□□□□□ -2.04
CFHR3-204ENST00000461558 A0A1W2PNN7 141 aa2.32□□□□□ -2.04
CFHR3-204ENST00000461558 C16orf90A8MZG2 172 aa2.32□□□□□ -2.04
CFHR3-204ENST00000461558 TMEM258P61165 79 aa2.32□□□□□ -2.04
CFHR3-204ENST00000461558 RPS28P62857 69 aaKnown RBP2.32□□□□□ -2.04
CFHR3-204ENST00000461558 B9D2Q9BPU9 175 aa2.32□□□□□ -2.04
CFHR3-204ENST00000461558 DNAH10Q8IVF4 4471 aa2.32□□□□□ -2.04
CFHR3-204ENST00000461558 LRCOL1A6NCL2 159 aa2.31□□□□□ -2.04
CFHR3-204ENST00000461558 C3orf84H3BNL1 204 aa2.31□□□□□ -2.04
CFHR3-204ENST00000461558 BPY2O14599 106 aa2.31□□□□□ -2.04
CFHR3-204ENST00000461558 KLKP1Q107X0 134 aa2.31□□□□□ -2.04
CFHR3-204ENST00000461558 NREPQ16612 68 aa2.31□□□□□ -2.04
CFHR3-204ENST00000461558 C1orf137Q5JT78 98 aa2.31□□□□□ -2.04
CFHR3-204ENST00000461558 Q6ZRN7 208 aaPredicted RBP2.31□□□□□ -2.04
CFHR3-204ENST00000461558 C20orf197Q8N268 126 aa2.31□□□□□ -2.04
CFHR3-204ENST00000461558 DPH3Q96FX2 82 aa2.31□□□□□ -2.04
CFHR3-204ENST00000461558 H7BZZ5 65 aa2.3□□□□□ -2.04
CFHR3-204ENST00000461558 J3KT08 172 aa2.3□□□□□ -2.04
CFHR3-204ENST00000461558 OXTP01178 125 aa2.3□□□□□ -2.04
CFHR3-204ENST00000461558 SPRR1BP22528 89 aa2.3□□□□□ -2.04
CFHR3-204ENST00000461558 FUSP35637 526 aaKnown RBP eCLIP2.3□□□□□ -2.04
CFHR3-204ENST00000461558 UBE2BP63146 152 aa2.3□□□□□ -2.04
CFHR3-204ENST00000461558 UBE2DNLQ8IWF7 75 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms