RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 KMT2CQ8NEZ4 4911 aaKnown RBP-0.49□□□□□ -2.49
VCL-203ENST00000461383 DIP2BQ9P265 1576 aa-0.49□□□□□ -2.49
VCL-203ENST00000461383 KRTAP19-8Q3LI54 63 aa-0.5□□□□□ -2.49
VCL-203ENST00000461383 DEPDC5O75140 1603 aa-0.5□□□□□ -2.49
VCL-203ENST00000461383 H3BUT2 72 aa-0.51□□□□□ -2.49
VCL-203ENST00000461383 WIZO95785 1651 aa-0.51□□□□□ -2.49
VCL-203ENST00000461383 SMIM13P0DJ93 91 aa-0.51□□□□□ -2.49
VCL-203ENST00000461383 CCDC18Q5T9S5 1454 aa-0.51□□□□□ -2.49
VCL-203ENST00000461383 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.52□□□□□ -2.49
VCL-203ENST00000461383 LCE6AA0A183 80 aa-0.52□□□□□ -2.49
VCL-203ENST00000461383 ZZEF1O43149 2961 aa-0.52□□□□□ -2.49
VCL-203ENST00000461383 RICTORQ6R327 1708 aa-0.52□□□□□ -2.49
VCL-203ENST00000461383 DNAH9Q9NYC9 4486 aa-0.53□□□□□ -2.49
VCL-203ENST00000461383 PCLOQ9Y6V0 5065 aa-0.53□□□□□ -2.49
VCL-203ENST00000461383 C9orf92A6NGG3 77 aa-0.53□□□□□ -2.49
VCL-203ENST00000461383 HMGA1P17096 107 aaKnown RBP-0.53□□□□□ -2.49
VCL-203ENST00000461383 DEFB121Q5J5C9 76 aa-0.53□□□□□ -2.49
VCL-203ENST00000461383 DCAF1Q9Y4B6 1507 aa-0.54□□□□□ -2.5
VCL-203ENST00000461383 ITSN1Q15811 1721 aa-0.54□□□□□ -2.5
VCL-203ENST00000461383 MED14O60244 1454 aa-0.54□□□□□ -2.5
VCL-203ENST00000461383 CUBNO60494 3623 aa-0.55□□□□□ -2.5
VCL-203ENST00000461383 AKAP9Q99996 3911 aa-0.55□□□□□ -2.5
VCL-203ENST00000461383 ANKRD50Q9ULJ7 1429 aa-0.55□□□□□ -2.5
VCL-203ENST00000461383 DNAH6Q9C0G6 4158 aa-0.55□□□□□ -2.5
VCL-203ENST00000461383 H0YAA0 97 aa-0.55□□□□□ -2.5
VCL-203ENST00000461383 LAMA5O15230 3695 aa-0.55□□□□□ -2.5
VCL-203ENST00000461383 HIVEP1P15822 2718 aa-0.55□□□□□ -2.5
VCL-203ENST00000461383 ACACAQ13085 2346 aa-0.55□□□□□ -2.5
VCL-203ENST00000461383 DSPP15924 2871 aaKnown RBP-0.55□□□□□ -2.5
VCL-203ENST00000461383 MRPL33O75394 65 aaKnown RBP-0.56□□□□□ -2.5
VCL-203ENST00000461383 FAT3Q8TDW7 4589 aa-0.56□□□□□ -2.5
VCL-203ENST00000461383 ABCC1P33527 1531 aa-0.56□□□□□ -2.5
VCL-203ENST00000461383 HTTP42858 3142 aa-0.56□□□□□ -2.5
VCL-203ENST00000461383 MTORP42345 2549 aa-0.57□□□□□ -2.5
VCL-203ENST00000461383 KDM5DQ9BY66 1539 aa-0.57□□□□□ -2.5
VCL-203ENST00000461383 TJP1Q07157 1748 aa-0.57□□□□□ -2.5
VCL-203ENST00000461383 NBPF19A0A087WUL8 3843 aa-0.57□□□□□ -2.5
VCL-203ENST00000461383 IAPPP10997 89 aa-0.57□□□□□ -2.5
VCL-203ENST00000461383 BVES-AS1Q5T3Y7 98 aa-0.57□□□□□ -2.5
VCL-203ENST00000461383 ERVK-7P63135 1459 aa-0.57□□□□□ -2.5
VCL-203ENST00000461383 FASNP49327 2511 aaKnown RBP-0.58□□□□□ -2.5
VCL-203ENST00000461383 LYNX1G3V0Z9 82 aa-0.58□□□□□ -2.5
VCL-203ENST00000461383 PRLHP81277 87 aa-0.58□□□□□ -2.5
VCL-203ENST00000461383 HERC1Q15751 4861 aa-0.58□□□□□ -2.5
VCL-203ENST00000461383 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.58□□□□□ -2.5
VCL-203ENST00000461383 DEFB130BP0DP73 79 aa-0.59□□□□□ -2.5
VCL-203ENST00000461383 DEFB130AP0DP74 79 aa-0.59□□□□□ -2.5
VCL-203ENST00000461383 THOC2Q8NI27 1593 aaKnown RBP-0.59□□□□□ -2.5
VCL-203ENST00000461383 DMXL1Q9Y485 3027 aa-0.59□□□□□ -2.5
VCL-203ENST00000461383 TACC2O95359 2948 aa-0.6□□□□□ -2.51
VCL-203ENST00000461383 CEP290O15078 2479 aa-0.6□□□□□ -2.51
VCL-203ENST00000461383 HFM1A2PYH4 1435 aa-0.6□□□□□ -2.51
VCL-203ENST00000461383 DEFB131BA0A096LNP1 70 aa-0.6□□□□□ -2.51
VCL-203ENST00000461383 TEP1Q99973 2627 aaKnown RBP-0.6□□□□□ -2.51
VCL-203ENST00000461383 LRRK2Q5S007 2527 aa-0.61□□□□□ -2.51
VCL-203ENST00000461383 FAM186AA6NE01 2351 aa-0.61□□□□□ -2.51
VCL-203ENST00000461383 MT1AP04731 61 aa-0.61□□□□□ -2.51
VCL-203ENST00000461383 SPRR2FQ96RM1 72 aa-0.61□□□□□ -2.51
VCL-203ENST00000461383 UBL5Q9BZL1 73 aa-0.61□□□□□ -2.51
VCL-203ENST00000461383 STARD9Q9P2P6 4700 aa-0.61□□□□□ -2.51
VCL-203ENST00000461383 PKHD1L1Q86WI1 4243 aa-0.61□□□□□ -2.51
VCL-203ENST00000461383 PKD1L2Q7Z442 2459 aa-0.61□□□□□ -2.51
VCL-203ENST00000461383 CFAP74Q9C0B2 1584 aa-0.62□□□□□ -2.51
VCL-203ENST00000461383 FAT1Q14517 4588 aa-0.62□□□□□ -2.51
VCL-203ENST00000461383 ANKRD36CQ5JPF3 1778 aa-0.62□□□□□ -2.51
VCL-203ENST00000461383 MAP3K1Q13233 1512 aa-0.62□□□□□ -2.51
VCL-203ENST00000461383 VPS13DQ5THJ4 4388 aa-0.62□□□□□ -2.51
VCL-203ENST00000461383 RALGAPBQ86X10 1494 aa-0.62□□□□□ -2.51
VCL-203ENST00000461383 C18orf32Q8TCD1 76 aa-0.63□□□□□ -2.51
VCL-203ENST00000461383 VPS13BQ7Z7G8 4022 aa-0.63□□□□□ -2.51
VCL-203ENST00000461383 GCN1Q92616 2671 aaKnown RBP-0.63□□□□□ -2.51
VCL-203ENST00000461383 ZC3H13Q5T200 1668 aaKnown RBP-0.64□□□□□ -2.51
VCL-203ENST00000461383 ARHGAP35Q9NRY4 1499 aa-0.64□□□□□ -2.51
VCL-203ENST00000461383 DEFB106AQ8N104 65 aa-0.64□□□□□ -2.51
VCL-203ENST00000461383 ANK3Q12955 4377 aaKnown RBP-0.64□□□□□ -2.51
VCL-203ENST00000461383 ANKRD11Q6UB99 2663 aaPredicted RBP-0.64□□□□□ -2.51
VCL-203ENST00000461383 MYO18BQ8IUG5 2567 aa-0.64□□□□□ -2.51
VCL-203ENST00000461383 DNAH3Q8TD57 4116 aa-0.65□□□□□ -2.51
VCL-203ENST00000461383 H3BVH4 76 aa-0.65□□□□□ -2.51
VCL-203ENST00000461383 S4R3F8 94 aa-0.65□□□□□ -2.51
VCL-203ENST00000461383 NRAPQ86VF7 1730 aa-0.65□□□□□ -2.51
VCL-203ENST00000461383 CCDC168Q8NDH2 2452 aa-0.66□□□□□ -2.51
VCL-203ENST00000461383 KCNQ1DNQ9H478 68 aa-0.66□□□□□ -2.52
VCL-203ENST00000461383 KIAA0586Q9BVV6 1533 aa-0.66□□□□□ -2.52
VCL-203ENST00000461383 LMTK2Q8IWU2 1503 aa-0.67□□□□□ -2.52
VCL-203ENST00000461383 ANKARQ7Z5J8 1434 aa-0.67□□□□□ -2.52
VCL-203ENST00000461383 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.67□□□□□ -2.52
VCL-203ENST00000461383 DNAH11Q96DT5 4516 aa-0.68□□□□□ -2.52
VCL-203ENST00000461383 BPTFQ12830 3046 aa-0.68□□□□□ -2.52
VCL-203ENST00000461383 ENHOQ6UWT2 76 aa-0.68□□□□□ -2.52
VCL-203ENST00000461383 RRBP1Q9P2E9 1410 aaKnown RBP-0.69□□□□□ -2.52
VCL-203ENST00000461383 CRIP1P50238 77 aa-0.69□□□□□ -2.52
VCL-203ENST00000461383 KRTAP20-2Q3LI61 65 aa-0.69□□□□□ -2.52
VCL-203ENST00000461383 RNF17Q9BXT8 1623 aaKnown RBP-0.69□□□□□ -2.52
VCL-203ENST00000461383 CD163L1Q9NR16 1453 aa-0.69□□□□□ -2.52
VCL-203ENST00000461383 LRRIQ1Q96JM4 1722 aa-0.69□□□□□ -2.52
VCL-203ENST00000461383 APOBP04114 4563 aaKnown RBP-0.7□□□□□ -2.52
VCL-203ENST00000461383 UBR4Q5T4S7 5183 aa-0.7□□□□□ -2.52
VCL-203ENST00000461383 PARP4Q9UKK3 1724 aaKnown RBP-0.7□□□□□ -2.52
VCL-203ENST00000461383 LAMA1P25391 3075 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms