RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 A6NJY4 79 aa8.61□□□□□ -1.03
VARS-219ENST00000461328 CD164Q04900 197 aa8.61□□□□□ -1.03
VARS-219ENST00000461328 PYY3Q5JQD4 70 aa8.61□□□□□ -1.03
VARS-219ENST00000461328 CEND1Q8N111 149 aa8.61□□□□□ -1.03
VARS-219ENST00000461328 A0A0G2JQZ4 141 aa8.59□□□□□ -1.03
VARS-219ENST00000461328 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.59□□□□□ -1.03
VARS-219ENST00000461328 SNCGO76070 127 aa8.57□□□□□ -1.04
VARS-219ENST00000461328 FXYD2P54710 66 aa8.55□□□□□ -1.04
VARS-219ENST00000461328 PRO1854Q9UHT4 67 aa8.55□□□□□ -1.04
VARS-219ENST00000461328 H0YGX0 51 aa8.54□□□□□ -1.04
VARS-219ENST00000461328 HSD52Q0P140 79 aa8.54□□□□□ -1.04
VARS-219ENST00000461328 SNHG12Q9BXW3 62 aa8.54□□□□□ -1.04
VARS-219ENST00000461328 MUC17Q685J3 4493 aa8.54□□□□□ -1.04
VARS-219ENST00000461328 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
VARS-219ENST00000461328 Q6JHZ5 121 aa8.53□□□□□ -1.04
VARS-219ENST00000461328 PPDPFLQ8WWR9 84 aa8.53□□□□□ -1.04
VARS-219ENST00000461328 SEC61BP60468 96 aaKnown RBP8.52□□□□□ -1.05
VARS-219ENST00000461328 TCL1BO95988 128 aa8.51□□□□□ -1.05
VARS-219ENST00000461328 Q5XG85 94 aa8.51□□□□□ -1.05
VARS-219ENST00000461328 CLEC2BQ92478 149 aa8.51□□□□□ -1.05
VARS-219ENST00000461328 UQCR10Q9UDW1 63 aa8.51□□□□□ -1.05
VARS-219ENST00000461328 OCIAD2Q56VL3 154 aa8.5□□□□□ -1.05
VARS-219ENST00000461328 FAM218AQ96MZ4 157 aa8.5□□□□□ -1.05
VARS-219ENST00000461328 C9orf92A6NGG3 77 aa8.49□□□□□ -1.05
VARS-219ENST00000461328 IGFL1Q6UW32 110 aa8.49□□□□□ -1.05
VARS-219ENST00000461328 IGLV8-61A0A075B6I0 122 aa8.48□□□□□ -1.05
VARS-219ENST00000461328 H3BUT2 72 aa8.48□□□□□ -1.05
VARS-219ENST00000461328 K7ERJ3 54 aa8.48□□□□□ -1.05
VARS-219ENST00000461328 TRIAP1O43715 76 aa8.48□□□□□ -1.05
VARS-219ENST00000461328 PSMB2P49721 201 aa8.48□□□□□ -1.05
VARS-219ENST00000461328 XP32Q5T750 250 aa8.48□□□□□ -1.05
VARS-219ENST00000461328 C1orf195Q5TG92 126 aa8.47□□□□□ -1.05
VARS-219ENST00000461328 TRBV7-7A0A0K0K1E9 115 aa8.45□□□□□ -1.06
VARS-219ENST00000461328 A0A1B0GX51 115 aa8.45□□□□□ -1.06
VARS-219ENST00000461328 GHRHP01286 108 aa8.45□□□□□ -1.06
VARS-219ENST00000461328 LCE2AQ5TA79 106 aaPredicted RBP8.45□□□□□ -1.06
VARS-219ENST00000461328 FABP2P12104 132 aa8.44□□□□□ -1.06
VARS-219ENST00000461328 DNAL4O96015 105 aa8.43□□□□□ -1.06
VARS-219ENST00000461328 NDUFV3P56181 108 aaKnown RBP8.43□□□□□ -1.06
VARS-219ENST00000461328 FAT4Q6V0I7 4981 aa8.42□□□□□ -1.06
VARS-219ENST00000461328 COX6CP09669 75 aa8.42□□□□□ -1.06
VARS-219ENST00000461328 KRTAP4-1Q9BYQ7 146 aa8.41□□□□□ -1.06
VARS-219ENST00000461328 H3BMG7 143 aa8.39□□□□□ -1.07
VARS-219ENST00000461328 ORMDL1Q9P0S3 153 aa8.38□□□□□ -1.07
VARS-219ENST00000461328 SS18L2Q9UHA2 77 aa8.36□□□□□ -1.07
VARS-219ENST00000461328 A0A1B0GV72 72 aa8.35□□□□□ -1.07
VARS-219ENST00000461328 LST1O00453 97 aa8.35□□□□□ -1.07
VARS-219ENST00000461328 SCGB1C2P0DMR2 95 aa8.35□□□□□ -1.07
VARS-219ENST00000461328 TEN1Q86WV5 123 aa8.35□□□□□ -1.07
VARS-219ENST00000461328 H3BQ85 93 aa8.34□□□□□ -1.07
VARS-219ENST00000461328 PCOTHQ58A44 107 aa8.34□□□□□ -1.07
VARS-219ENST00000461328 Q6Q795 121 aa8.34□□□□□ -1.07
VARS-219ENST00000461328 SMIM6P0DI80 62 aa8.33□□□□□ -1.08
VARS-219ENST00000461328 A0A087WSZ3 146 aa8.32□□□□□ -1.08
VARS-219ENST00000461328 M0R143 59 aa8.32□□□□□ -1.08
VARS-219ENST00000461328 TMEM256-PLSCR3K7ERE1 68 aa8.31□□□□□ -1.08
VARS-219ENST00000461328 ANKRD29Q8N6D5 301 aa8.29□□□□□ -1.08
VARS-219ENST00000461328 TRACP01848 142 aa8.28□□□□□ -1.08
VARS-219ENST00000461328 RPL37P61927 97 aaKnown RBP8.28□□□□□ -1.08
VARS-219ENST00000461328 KRTAP9-2Q9BYQ4 174 aa8.28□□□□□ -1.08
VARS-219ENST00000461328 OBSCN-AS1Q96MR7 158 aa8.27□□□□□ -1.09
VARS-219ENST00000461328 A0A1W2PNM2 257 aa8.26□□□□□ -1.09
VARS-219ENST00000461328 UBE2V1Q13404 147 aa8.25□□□□□ -1.09
VARS-219ENST00000461328 TSTD3H0UI37 97 aa8.24□□□□□ -1.09
VARS-219ENST00000461328 SIGMAR1Q99720 223 aa8.23□□□□□ -1.09
VARS-219ENST00000461328 NAA38Q9BRA0 125 aaKnown RBP8.23□□□□□ -1.09
VARS-219ENST00000461328 TRBV7-4A0A0J9YYF1 115 aa8.22□□□□□ -1.09
VARS-219ENST00000461328 LOC105371267A0A1B0GV96 52 aa8.22□□□□□ -1.09
VARS-219ENST00000461328 CCKP06307 115 aa8.22□□□□□ -1.09
VARS-219ENST00000461328 VPS25Q9BRG1 176 aa8.21□□□□□ -1.1
VARS-219ENST00000461328 ATXN8Q156A1 80 aa8.2□□□□□ -1.1
VARS-219ENST00000461328 BATFQ16520 125 aa8.2□□□□□ -1.1
VARS-219ENST00000461328 Q96NJ1 140 aa8.2□□□□□ -1.1
VARS-219ENST00000461328 BAALC-AS2P0C853 105 aa8.19□□□□□ -1.1
VARS-219ENST00000461328 RBM3P98179 157 aaKnown RBP8.19□□□□□ -1.1
VARS-219ENST00000461328 LCE2CQ5TA81 110 aa8.19□□□□□ -1.1
VARS-219ENST00000461328 DSCR8Q96T75 97 aa8.19□□□□□ -1.1
VARS-219ENST00000461328 KRTAP19-2Q3LHN2 52 aa8.17□□□□□ -1.1
VARS-219ENST00000461328 LYRM7Q5U5X0 104 aa8.17□□□□□ -1.1
VARS-219ENST00000461328 ATP11AUNQ6ZP68 121 aa8.17□□□□□ -1.1
VARS-219ENST00000461328 Q75L30 129 aa8.17□□□□□ -1.1
VARS-219ENST00000461328 IGKV4-1P06312 121 aa8.16□□□□□ -1.1
VARS-219ENST00000461328 DSCR10P59022 87 aa8.14□□□□□ -1.11
VARS-219ENST00000461328 C9JAW5 83 aa8.13□□□□□ -1.11
VARS-219ENST00000461328 DEFB116Q30KQ4 102 aa8.12□□□□□ -1.11
VARS-219ENST00000461328 MT1HP80294 61 aa8.11□□□□□ -1.11
VARS-219ENST00000461328 LINC00313P59037 77 aa8.09□□□□□ -1.11
VARS-219ENST00000461328 COX6B2Q6YFQ2 88 aa8.09□□□□□ -1.11
VARS-219ENST00000461328 C20orf166-AS1Q96NR2 134 aa8.09□□□□□ -1.11
VARS-219ENST00000461328 LINC00472Q9H8W2 130 aa8.09□□□□□ -1.11
VARS-219ENST00000461328 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
VARS-219ENST00000461328 JMJD7-PLA2G4BH0Y9G9 81 aa8.08□□□□□ -1.12
VARS-219ENST00000461328 A8MUU9 505 aa8.07□□□□□ -1.12
VARS-219ENST00000461328 C21orf62-AS1Q17RA5 79 aa8.07□□□□□ -1.12
VARS-219ENST00000461328 IGHV6-1A0A0B4J1U7 121 aa8.06□□□□□ -1.12
VARS-219ENST00000461328 LOC110117498A0A087WWA1 95 aa8.03□□□□□ -1.12
VARS-219ENST00000461328 C9orf118A6NHY6 69 aa8.03□□□□□ -1.12
VARS-219ENST00000461328 Q6ZQT0 140 aa8.03□□□□□ -1.12
VARS-219ENST00000461328 C14orf132Q9NPU4 83 aa8.03□□□□□ -1.12
VARS-219ENST00000461328 PDE6GP18545 87 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms