RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 SMIM2Q9BVW6 85 aa0.77□□□□□ -2.29
CCDC58-202ENST00000460810 PKDREJQ9NTG1 2253 aa0.77□□□□□ -2.29
CCDC58-202ENST00000460810 WNK2Q9Y3S1 2297 aa0.77□□□□□ -2.29
CCDC58-202ENST00000460810 BDP1A6H8Y1 2624 aa0.77□□□□□ -2.29
CCDC58-202ENST00000460810 C2CD3Q4AC94 2353 aa0.76□□□□□ -2.29
CCDC58-202ENST00000460810 H0YAA0 97 aa0.76□□□□□ -2.29
CCDC58-202ENST00000460810 NDUFA1O15239 70 aa0.76□□□□□ -2.29
CCDC58-202ENST00000460810 DEFB105AQ8NG35 78 aa0.76□□□□□ -2.29
CCDC58-202ENST00000460810 ALMS1Q8TCU4 4167 aa0.76□□□□□ -2.29
CCDC58-202ENST00000460810 IGF2RP11717 2491 aa0.75□□□□□ -2.29
CCDC58-202ENST00000460810 USF3Q68DE3 2245 aa0.75□□□□□ -2.29
CCDC58-202ENST00000460810 SPRR1BP22528 89 aa0.75□□□□□ -2.29
CCDC58-202ENST00000460810 LELP1Q5T871 98 aa0.75□□□□□ -2.29
CCDC58-202ENST00000460810 IAPPP10997 89 aa0.74□□□□□ -2.29
CCDC58-202ENST00000460810 H1FX-AS1Q4G0G2 97 aa0.74□□□□□ -2.29
CCDC58-202ENST00000460810 MINOS1Q5TGZ0 78 aa0.74□□□□□ -2.29
CCDC58-202ENST00000460810 SPINK6Q6UWN8 80 aa0.74□□□□□ -2.29
CCDC58-202ENST00000460810 SPTBN2O15020 2390 aa0.74□□□□□ -2.29
CCDC58-202ENST00000460810 TPRP12270 2363 aaKnown RBP0.74□□□□□ -2.29
CCDC58-202ENST00000460810 SPTBN1Q01082 2364 aaKnown RBP0.74□□□□□ -2.29
CCDC58-202ENST00000460810 PIEZO1Q92508 2521 aa0.73□□□□□ -2.29
CCDC58-202ENST00000460810 CHD9Q3L8U1 2897 aa0.73□□□□□ -2.29
CCDC58-202ENST00000460810 SMR3AQ99954 134 aa0.73□□□□□ -2.29
CCDC58-202ENST00000460810 C6orf48Q9UBA6 75 aa0.73□□□□□ -2.29
CCDC58-202ENST00000460810 APLNQ9ULZ1 77 aa0.73□□□□□ -2.29
CCDC58-202ENST00000460810 TENM3Q9P273 2699 aa0.72□□□□□ -2.29
CCDC58-202ENST00000460810 REV3LO60673 3130 aa0.72□□□□□ -2.29
CCDC58-202ENST00000460810 WFDC13Q8IUB5 93 aa0.72□□□□□ -2.29
CCDC58-202ENST00000460810 ARHGAP5-AS1Q96IT6 56 aa0.72□□□□□ -2.29
CCDC58-202ENST00000460810 DSPP15924 2871 aaKnown RBP0.72□□□□□ -2.29
CCDC58-202ENST00000460810 PCNX1Q96RV3 2341 aa0.72□□□□□ -2.29
CCDC58-202ENST00000460810 GVINP1Q7Z2Y8 2422 aa0.72□□□□□ -2.29
CCDC58-202ENST00000460810 CELSR2Q9HCU4 2923 aa0.71□□□□□ -2.29
CCDC58-202ENST00000460810 DEFB130BP0DP73 79 aa0.71□□□□□ -2.3
CCDC58-202ENST00000460810 DEFB130AP0DP74 79 aa0.71□□□□□ -2.3
CCDC58-202ENST00000460810 RPS27P42677 84 aaKnown RBP0.71□□□□□ -2.3
CCDC58-202ENST00000460810 RPS27LQ71UM5 84 aaKnown RBP0.71□□□□□ -2.3
CCDC58-202ENST00000460810 ABCA12Q86UK0 2595 aa0.71□□□□□ -2.3
CCDC58-202ENST00000460810 CSPG4Q6UVK1 2322 aa0.7□□□□□ -2.3
CCDC58-202ENST00000460810 POLR2KP53803 58 aaKnown RBP0.7□□□□□ -2.3
CCDC58-202ENST00000460810 F8P00451 2351 aa0.69□□□□□ -2.3
CCDC58-202ENST00000460810 ZNF292O60281 2723 aa0.69□□□□□ -2.3
CCDC58-202ENST00000460810 IGLV5-48A0A075B6I7 105 aa0.69□□□□□ -2.3
CCDC58-202ENST00000460810 RPL39P62891 51 aaKnown RBP0.69□□□□□ -2.3
CCDC58-202ENST00000460810 WFDC10BQ8IUB3 73 aa0.69□□□□□ -2.3
CCDC58-202ENST00000460810 TTTY10Q9BZA0 68 aa0.69□□□□□ -2.3
CCDC58-202ENST00000460810 CSMD3Q7Z407 3707 aa0.68□□□□□ -2.3
CCDC58-202ENST00000460810 DEFB109BQ30KR1 87 aa0.68□□□□□ -2.3
CCDC58-202ENST00000460810 LINC01590Q5TEZ4 76 aa0.68□□□□□ -2.3
CCDC58-202ENST00000460810 RPL39LQ96EH5 51 aaKnown RBP0.68□□□□□ -2.3
CCDC58-202ENST00000460810 ABCA2Q9BZC7 2435 aa0.67□□□□□ -2.3
CCDC58-202ENST00000460810 WT1-ASQ06250 92 aa0.67□□□□□ -2.3
CCDC58-202ENST00000460810 KAAG1Q9UBP8 84 aa0.67□□□□□ -2.3
CCDC58-202ENST00000460810 TRANK1O15050 2925 aa0.67□□□□□ -2.3
CCDC58-202ENST00000460810 KLK9Q2XQG4 91 aa0.66□□□□□ -2.3
CCDC58-202ENST00000460810 CREBBPQ92793 2442 aa0.65□□□□□ -2.31
CCDC58-202ENST00000460810 MMP24-AS1A0A0U1RRL7 71 aa0.65□□□□□ -2.31
CCDC58-202ENST00000460810 H3BSH0 61 aa0.65□□□□□ -2.31
CCDC58-202ENST00000460810 DEFB131AP59861 70 aa0.65□□□□□ -2.31
CCDC58-202ENST00000460810 LEAP2Q969E1 77 aa0.65□□□□□ -2.31
CCDC58-202ENST00000460810 S4R3F8 94 aa0.64□□□□□ -2.31
CCDC58-202ENST00000460810 AKAP6Q13023 2319 aa0.64□□□□□ -2.31
CCDC58-202ENST00000460810 CEP290O15078 2479 aa0.63□□□□□ -2.31
CCDC58-202ENST00000460810 ATRQ13535 2644 aa0.63□□□□□ -2.31
CCDC58-202ENST00000460810 H3BUA1 57 aa0.63□□□□□ -2.31
CCDC58-202ENST00000460810 PRLHP81277 87 aa0.63□□□□□ -2.31
CCDC58-202ENST00000460810 PKD1L2Q7Z442 2459 aa0.63□□□□□ -2.31
CCDC58-202ENST00000460810 SRRM2Q9UQ35 2752 aaKnown RBP0.62□□□□□ -2.31
CCDC58-202ENST00000460810 A0A0C4DFX4 3053 aa0.62□□□□□ -2.31
CCDC58-202ENST00000460810 SYNE1Q8NF91 8797 aaKnown RBP0.62□□□□□ -2.31
CCDC58-202ENST00000460810 PRRC2CQ9Y520 2896 aaKnown RBP0.62□□□□□ -2.31
CCDC58-202ENST00000460810 SPTA1P02549 2419 aa0.62□□□□□ -2.31
CCDC58-202ENST00000460810 M0QY20 66 aa0.62□□□□□ -2.31
CCDC58-202ENST00000460810 SPINK1P00995 79 aa0.62□□□□□ -2.31
CCDC58-202ENST00000460810 PRCDQ00LT1 54 aa0.62□□□□□ -2.31
CCDC58-202ENST00000460810 CLPSL2Q6UWE3 100 aa0.62□□□□□ -2.31
CCDC58-202ENST00000460810 ACACAQ13085 2346 aa0.62□□□□□ -2.31
CCDC58-202ENST00000460810 HECTD1Q9ULT8 2610 aa0.62□□□□□ -2.31
CCDC58-202ENST00000460810 CHD7Q9P2D1 2997 aa0.61□□□□□ -2.31
CCDC58-202ENST00000460810 A8MTW9 85 aa0.61□□□□□ -2.31
CCDC58-202ENST00000460810 NBASA2RRP1 2371 aa0.61□□□□□ -2.31
CCDC58-202ENST00000460810 UBR5O95071 2799 aaPredicted RBP0.6□□□□□ -2.31
CCDC58-202ENST00000460810 DEFB106AQ8N104 65 aa0.6□□□□□ -2.31
CCDC58-202ENST00000460810 EP300Q09472 2414 aaPredicted RBP0.6□□□□□ -2.31
CCDC58-202ENST00000460810 CHD6Q8TD26 2715 aa0.6□□□□□ -2.31
CCDC58-202ENST00000460810 AKAP13Q12802 2813 aa0.6□□□□□ -2.31
CCDC58-202ENST00000460810 WNK1Q9H4A3 2382 aa0.59□□□□□ -2.31
CCDC58-202ENST00000460810 DEFB104AQ8WTQ1 72 aa0.59□□□□□ -2.31
CCDC58-202ENST00000460810 NAV2Q8IVL1 2488 aa0.59□□□□□ -2.32
CCDC58-202ENST00000460810 CHD8Q9HCK8 2581 aa0.58□□□□□ -2.32
CCDC58-202ENST00000460810 OTOGQ6ZRI0 2925 aa0.58□□□□□ -2.32
CCDC58-202ENST00000460810 TOMM7Q9P0U1 55 aa0.58□□□□□ -2.32
CCDC58-202ENST00000460810 SETD2Q9BYW2 2564 aaPredicted RBP0.58□□□□□ -2.32
CCDC58-202ENST00000460810 NCOR1O75376 2440 aa0.58□□□□□ -2.32
CCDC58-202ENST00000460810 DMBT1Q9UGM3 2413 aaPredicted RBP0.58□□□□□ -2.32
CCDC58-202ENST00000460810 VWFP04275 2813 aa0.58□□□□□ -2.32
CCDC58-202ENST00000460810 CELSR1Q9NYQ6 3014 aa0.57□□□□□ -2.32
CCDC58-202ENST00000460810 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
CCDC58-202ENST00000460810 U3KQA8 63 aa0.57□□□□□ -2.32
CCDC58-202ENST00000460810 MGAQ8IWI9 3026 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms