RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 LOC730098B7Z3J9 87 aa1.39□□□□□ -2.19
CCDC50-203ENST00000460064 MRPL33O75394 65 aaKnown RBP1.39□□□□□ -2.19
CCDC50-203ENST00000460064 USP24Q9UPU5 2620 aa1.39□□□□□ -2.19
CCDC50-203ENST00000460064 DNAH12Q6ZR08 3092 aa1.39□□□□□ -2.19
CCDC50-203ENST00000460064 CNTRLQ7Z7A1 2325 aa1.39□□□□□ -2.19
CCDC50-203ENST00000460064 MAP1BP46821 2468 aaKnown RBP1.39□□□□□ -2.19
CCDC50-203ENST00000460064 TEP1Q99973 2627 aaKnown RBP1.38□□□□□ -2.19
CCDC50-203ENST00000460064 NCOR1O75376 2440 aa1.38□□□□□ -2.19
CCDC50-203ENST00000460064 FXYD6P3P58550 94 aa1.38□□□□□ -2.19
CCDC50-203ENST00000460064 PIGYQ3MUY2 71 aa1.38□□□□□ -2.19
CCDC50-203ENST00000460064 GOLGA4Q13439 2230 aaKnown RBP1.38□□□□□ -2.19
CCDC50-203ENST00000460064 DMDP11532 3685 aa1.37□□□□□ -2.19
CCDC50-203ENST00000460064 SPINK4O60575 86 aa1.37□□□□□ -2.19
CCDC50-203ENST00000460064 COX6A2Q02221 97 aa1.37□□□□□ -2.19
CCDC50-203ENST00000460064 USMG5Q96IX5 58 aa1.37□□□□□ -2.19
CCDC50-203ENST00000460064 TIMM8BQ9Y5J9 83 aaPredicted RBP1.37□□□□□ -2.19
CCDC50-203ENST00000460064 PTPN13Q12923 2485 aa1.37□□□□□ -2.19
CCDC50-203ENST00000460064 DOPEY1Q5JWR5 2465 aa1.37□□□□□ -2.19
CCDC50-203ENST00000460064 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
CCDC50-203ENST00000460064 AHCTF1Q8WYP5 2266 aa1.36□□□□□ -2.19
CCDC50-203ENST00000460064 H0YGX0 51 aa1.36□□□□□ -2.19
CCDC50-203ENST00000460064 NDUFA3O95167 84 aa1.36□□□□□ -2.19
CCDC50-203ENST00000460064 CNFNQ9BYD5 112 aa1.36□□□□□ -2.19
CCDC50-203ENST00000460064 SPEGQ15772 3267 aa1.36□□□□□ -2.19
CCDC50-203ENST00000460064 FAM186AA6NE01 2351 aa1.36□□□□□ -2.19
CCDC50-203ENST00000460064 ABCA12Q86UK0 2595 aa1.35□□□□□ -2.19
CCDC50-203ENST00000460064 LINC00158P58513 81 aa1.35□□□□□ -2.19
CCDC50-203ENST00000460064 LELP1Q5T871 98 aa1.35□□□□□ -2.19
CCDC50-203ENST00000460064 RIF1Q5UIP0 2472 aaKnown RBP1.35□□□□□ -2.19
CCDC50-203ENST00000460064 BPTFQ12830 3046 aa1.35□□□□□ -2.19
CCDC50-203ENST00000460064 SMG1Q96Q15 3661 aaKnown RBP1.35□□□□□ -2.19
CCDC50-203ENST00000460064 DUOX1Q9NRD9 1551 aa1.34□□□□□ -2.19
CCDC50-203ENST00000460064 GVINP1Q7Z2Y8 2422 aa1.34□□□□□ -2.19
CCDC50-203ENST00000460064 PRB3Q04118 309 aaPredicted RBP1.34□□□□□ -2.19
CCDC50-203ENST00000460064 COX6B2Q6YFQ2 88 aa1.34□□□□□ -2.19
CCDC50-203ENST00000460064 Q8IZM0 81 aa1.34□□□□□ -2.19
CCDC50-203ENST00000460064 MYO18BQ8IUG5 2567 aa1.34□□□□□ -2.2
CCDC50-203ENST00000460064 DMXL1Q9Y485 3027 aa1.34□□□□□ -2.2
CCDC50-203ENST00000460064 FBN2P35556 2912 aa1.33□□□□□ -2.2
CCDC50-203ENST00000460064 MYO9AB2RTY4 2548 aa1.33□□□□□ -2.2
CCDC50-203ENST00000460064 ZFYVE26Q68DK2 2539 aa1.33□□□□□ -2.2
CCDC50-203ENST00000460064 H0YAA0 97 aa1.33□□□□□ -2.2
CCDC50-203ENST00000460064 SPINK9Q5DT21 86 aa1.33□□□□□ -2.2
CCDC50-203ENST00000460064 HECTD1Q9ULT8 2610 aa1.33□□□□□ -2.2
CCDC50-203ENST00000460064 DDX60Q8IY21 1712 aaKnown RBP1.32□□□□□ -2.2
CCDC50-203ENST00000460064 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.32□□□□□ -2.25e-6■■■■□ 22.8
CCDC50-203ENST00000460064 CNOT1A5YKK6 2376 aaKnown RBP1.32□□□□□ -2.2
CCDC50-203ENST00000460064 PRO0255Q9UI72 69 aa1.32□□□□□ -2.2
CCDC50-203ENST00000460064 PIEZO2Q9H5I5 2752 aa1.32□□□□□ -2.2
CCDC50-203ENST00000460064 CACNA1EQ15878 2313 aa1.32□□□□□ -2.2
CCDC50-203ENST00000460064 CACNA1HO95180 2353 aa1.32□□□□□ -2.2
CCDC50-203ENST00000460064 C2CD3Q4AC94 2353 aa1.32□□□□□ -2.2
CCDC50-203ENST00000460064 TEX15Q9BXT5 2789 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 CCL22O00626 93 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 DEFB124Q8NES8 71 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 RELNP78509 3460 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 TENM4Q6N022 2769 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 EP300Q09472 2414 aaPredicted RBP1.31□□□□□ -2.2
CCDC50-203ENST00000460064 WDR87Q6ZQQ6 2873 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 JMJD1CQ15652 2540 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 FRYQ5TBA9 3013 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 ITPR3Q14573 2671 aa1.31□□□□□ -2.2
CCDC50-203ENST00000460064 ZZEF1O43149 2961 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 ALMS1Q8TCU4 4167 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 A0A0D9SG42 100 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 LYNX1G3V0Z9 82 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 SPRR1AP35321 89 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 LINC00308Q8TCZ7 52 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 CHD9Q3L8U1 2897 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 NAV3Q8IVL0 2385 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 KALRNO60229 2985 aa1.3□□□□□ -2.2
CCDC50-203ENST00000460064 UBR5O95071 2799 aaPredicted RBP1.3□□□□□ -2.2
CCDC50-203ENST00000460064 NBEAQ8NFP9 2946 aa1.29□□□□□ -2.2
CCDC50-203ENST00000460064 SPTBN2O15020 2390 aa1.29□□□□□ -2.2
CCDC50-203ENST00000460064 CEP250Q9BV73 2442 aa1.29□□□□□ -2.2
CCDC50-203ENST00000460064 LOC400499M0QZD8 3231 aa1.29□□□□□ -2.2
CCDC50-203ENST00000460064 VPS13AQ96RL7 3174 aa1.29□□□□□ -2.2
CCDC50-203ENST00000460064 CREBBPQ92793 2442 aa1.29□□□□□ -2.2
CCDC50-203ENST00000460064 CFAP46Q8IYW2 2715 aa1.29□□□□□ -2.2
CCDC50-203ENST00000460064 IGSF10Q6WRI0 2623 aa1.28□□□□□ -2.2
CCDC50-203ENST00000460064 ITPR1Q14643 2758 aa1.28□□□□□ -2.2
CCDC50-203ENST00000460064 CHD7Q9P2D1 2997 aa1.28□□□□□ -2.2
CCDC50-203ENST00000460064 APLNQ9ULZ1 77 aa1.28□□□□□ -2.2
CCDC50-203ENST00000460064 ABCA2Q9BZC7 2435 aa1.28□□□□□ -2.2
CCDC50-203ENST00000460064 LAMA5O15230 3695 aa1.28□□□□□ -2.21
CCDC50-203ENST00000460064 WDFY3Q8IZQ1 3526 aa1.27□□□□□ -2.21
CCDC50-203ENST00000460064 SPTAN1Q13813 2472 aaKnown RBP1.27□□□□□ -2.21
CCDC50-203ENST00000460064 SPTA1P02549 2419 aa1.27□□□□□ -2.21
CCDC50-203ENST00000460064 TFF3Q07654 80 aa1.27□□□□□ -2.21
CCDC50-203ENST00000460064 TMEM167BQ9NRX6 74 aa1.27□□□□□ -2.21
CCDC50-203ENST00000460064 POLQO75417 2590 aa1.27□□□□□ -2.21
CCDC50-203ENST00000460064 PCNX1Q96RV3 2341 aa1.27□□□□□ -2.21
CCDC50-203ENST00000460064 NBPF19A0A087WUL8 3843 aa1.27□□□□□ -2.21
CCDC50-203ENST00000460064 FREM2Q5SZK8 3169 aa1.26□□□□□ -2.21
CCDC50-203ENST00000460064 TRIOO75962 3097 aa1.26□□□□□ -2.21
CCDC50-203ENST00000460064 DSPP15924 2871 aaKnown RBP1.26□□□□□ -2.21
CCDC50-203ENST00000460064 H1FX-AS1Q4G0G2 97 aa1.26□□□□□ -2.21
CCDC50-203ENST00000460064 Q5VSD8 79 aa1.26□□□□□ -2.21
CCDC50-203ENST00000460064 CELSR3Q9NYQ7 3312 aa1.26□□□□□ -2.21
CCDC50-203ENST00000460064 FRYLO94915 3013 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms