RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 HIST1H2BMQ99879 126 aa4.15□□□□□ -1.75
HPS4-207ENST00000459918 TTTY13Q9BZ97 58 aa4.15□□□□□ -1.75
HPS4-207ENST00000459918 TCL1BO95988 128 aa4.14□□□□□ -1.75
HPS4-207ENST00000459918 TEX49A0A1B0GTD5 131 aa4.13□□□□□ -1.75
HPS4-207ENST00000459918 COX7BP24311 80 aa4.13□□□□□ -1.75
HPS4-207ENST00000459918 LINC01545Q5VT33 79 aa4.13□□□□□ -1.75
HPS4-207ENST00000459918 SMIM29Q86T20 159 aa4.13□□□□□ -1.75
HPS4-207ENST00000459918 PCP2Q8IVA1 136 aa4.13□□□□□ -1.75
HPS4-207ENST00000459918 SPANXCQ9NY87 97 aa4.13□□□□□ -1.75
HPS4-207ENST00000459918 SYNE2Q8WXH0 6885 aaKnown RBP4.12□□□□□ -1.75
HPS4-207ENST00000459918 USH2AO75445 5202 aa4.12□□□□□ -1.75
HPS4-207ENST00000459918 ZNF815PA8K554 130 aa4.12□□□□□ -1.75
HPS4-207ENST00000459918 A0A0G2JQZ4 141 aa4.11□□□□□ -1.75
HPS4-207ENST00000459918 C20orf202A1L168 122 aa4.11□□□□□ -1.75
HPS4-207ENST00000459918 TIMM17BO60830 172 aa4.11□□□□□ -1.75
HPS4-207ENST00000459918 C3orf79P0CE67 100 aa4.11□□□□□ -1.75
HPS4-207ENST00000459918 C6orf99Q4VX62 202 aa4.11□□□□□ -1.75
HPS4-207ENST00000459918 PET117Q6UWS5 81 aa4.11□□□□□ -1.75
HPS4-207ENST00000459918 SSPOA2VEC9 5147 aa4.1□□□□□ -1.75
HPS4-207ENST00000459918 TRBV20-1A0A075B6N2 111 aa4.1□□□□□ -1.75
HPS4-207ENST00000459918 ELOF1P60002 83 aaKnown RBP4.1□□□□□ -1.75
HPS4-207ENST00000459918 Q5XG85 94 aa4.1□□□□□ -1.75
HPS4-207ENST00000459918 SPANXDQ9BXN6 97 aa4.1□□□□□ -1.75
HPS4-207ENST00000459918 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.75
HPS4-207ENST00000459918 F8WEM9 126 aa4.09□□□□□ -1.75
HPS4-207ENST00000459918 KRTDAPP60985 99 aa4.09□□□□□ -1.75
HPS4-207ENST00000459918 ATOH7Q8N100 152 aa4.09□□□□□ -1.75
HPS4-207ENST00000459918 OBSCN-AS1Q96MR7 158 aa4.09□□□□□ -1.75
HPS4-207ENST00000459918 SCGB1D4Q6XE38 83 aa4.08□□□□□ -1.76
HPS4-207ENST00000459918 LINC00518Q8N0U6 118 aa4.08□□□□□ -1.76
HPS4-207ENST00000459918 FAM236DA0A1B0GTK5 79 aa4.07□□□□□ -1.76
HPS4-207ENST00000459918 FAM236CP0DP71 79 aa4.07□□□□□ -1.76
HPS4-207ENST00000459918 A6NDN8 102 aa4.06□□□□□ -1.76
HPS4-207ENST00000459918 COA6Q5JTJ3 125 aaKnown RBP4.06□□□□□ -1.76
HPS4-207ENST00000459918 Q75L30 129 aa4.06□□□□□ -1.76
HPS4-207ENST00000459918 MUSTN1Q8IVN3 82 aa4.06□□□□□ -1.76
HPS4-207ENST00000459918 LINC00846Q9NV44 126 aa4.06□□□□□ -1.76
HPS4-207ENST00000459918 FCGBPQ9Y6R7 5405 aaPredicted RBP4.05□□□□□ -1.76
HPS4-207ENST00000459918 A0A1B0GWB2 263 aa4.05□□□□□ -1.76
HPS4-207ENST00000459918 Q96NJ1 140 aa4.05□□□□□ -1.76
HPS4-207ENST00000459918 NHP2Q9NX24 153 aaKnown RBP4.05□□□□□ -1.76
HPS4-207ENST00000459918 TRBV7-6A0A0J9YX20 115 aa4.04□□□□□ -1.76
HPS4-207ENST00000459918 IFITM1P13164 125 aa4.04□□□□□ -1.76
HPS4-207ENST00000459918 IGLV5-48A0A075B6I7 105 aa4.03□□□□□ -1.76
HPS4-207ENST00000459918 KRTAP10-10P60014 251 aa4.03□□□□□ -1.76
HPS4-207ENST00000459918 SMIM11BQ8TCY0 68 aa4.03□□□□□ -1.76
HPS4-207ENST00000459918 MT2AP02795 61 aa4.02□□□□□ -1.77
HPS4-207ENST00000459918 Q6ZVH6 145 aa4.02□□□□□ -1.77
HPS4-207ENST00000459918 TRBV7-7A0A0K0K1E9 115 aa4.01□□□□□ -1.77
HPS4-207ENST00000459918 A4D1N5 150 aa4.01□□□□□ -1.77
HPS4-207ENST00000459918 C9orf118A6NHY6 69 aa4.01□□□□□ -1.77
HPS4-207ENST00000459918 COPS9Q8WXC6 57 aa4.01□□□□□ -1.77
HPS4-207ENST00000459918 CLEC2BQ92478 149 aa4.01□□□□□ -1.77
HPS4-207ENST00000459918 TRAV13-2A0A0B4J235 113 aa4□□□□□ -1.77
HPS4-207ENST00000459918 LST1O00453 97 aa4□□□□□ -1.77
HPS4-207ENST00000459918 S100A6P06703 90 aa4□□□□□ -1.77
HPS4-207ENST00000459918 Q6JHZ5 121 aa4□□□□□ -1.77
HPS4-207ENST00000459918 IGFL1Q6UW32 110 aa4□□□□□ -1.77
HPS4-207ENST00000459918 C20orf166-AS1Q96NR2 134 aa4□□□□□ -1.77
HPS4-207ENST00000459918 MT1FP04733 61 aa3.99□□□□□ -1.77
HPS4-207ENST00000459918 RBM12B-AS1Q9P1G2 102 aa3.99□□□□□ -1.77
HPS4-207ENST00000459918 VAMP3Q15836 100 aa3.98□□□□□ -1.77
HPS4-207ENST00000459918 LINC00575Q6W349 94 aa3.98□□□□□ -1.77
HPS4-207ENST00000459918 HIST3H2BBQ8N257 126 aa3.98□□□□□ -1.77
HPS4-207ENST00000459918 HIST1H2BLQ99880 126 aa3.98□□□□□ -1.77
HPS4-207ENST00000459918 S100A2P29034 98 aa3.97□□□□□ -1.77
HPS4-207ENST00000459918 SNRPEP62304 92 aaKnown RBP3.97□□□□□ -1.77
HPS4-207ENST00000459918 Q6ZQY7 126 aa3.97□□□□□ -1.77
HPS4-207ENST00000459918 hADV29S1A0JD25 119 aa3.96□□□□□ -1.78
HPS4-207ENST00000459918 C12orf57Q99622 126 aa3.96□□□□□ -1.78
HPS4-207ENST00000459918 SS18L2Q9UHA2 77 aa3.96□□□□□ -1.78
HPS4-207ENST00000459918 HSBP1L1C9JCN9 74 aa3.94□□□□□ -1.78
HPS4-207ENST00000459918 C21orf62-AS1Q17RA5 79 aa3.94□□□□□ -1.78
HPS4-207ENST00000459918 OCIAD2Q56VL3 154 aa3.94□□□□□ -1.78
HPS4-207ENST00000459918 SNHG12Q9BXW3 62 aa3.94□□□□□ -1.78
HPS4-207ENST00000459918 A8MUU9 505 aa3.93□□□□□ -1.78
HPS4-207ENST00000459918 H3BUT2 72 aa3.93□□□□□ -1.78
HPS4-207ENST00000459918 DSCR10P59022 87 aa3.93□□□□□ -1.78
HPS4-207ENST00000459918 HIST1H4GQ99525 98 aa3.93□□□□□ -1.78
HPS4-207ENST00000459918 SIGMAR1Q99720 223 aa3.93□□□□□ -1.78
HPS4-207ENST00000459918 SCGB1D1O95968 90 aa3.92□□□□□ -1.78
HPS4-207ENST00000459918 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.92□□□□□ -1.78
HPS4-207ENST00000459918 MTURNQ8N3F0 131 aa3.92□□□□□ -1.78
HPS4-207ENST00000459918 BVES-AS1Q5T3Y7 98 aa3.91□□□□□ -1.78
HPS4-207ENST00000459918 COX8AP10176 69 aa3.9□□□□□ -1.79
HPS4-207ENST00000459918 C14orf144Q96I85 54 aa3.9□□□□□ -1.79
HPS4-207ENST00000459918 A0A087WSZ3 146 aa3.89□□□□□ -1.79
HPS4-207ENST00000459918 KRTAP19-6Q3LI70 58 aa3.89□□□□□ -1.79
HPS4-207ENST00000459918 FAM218AQ96MZ4 157 aa3.89□□□□□ -1.79
HPS4-207ENST00000459918 LINC00313P59037 77 aa3.88□□□□□ -1.79
HPS4-207ENST00000459918 KRTAP6-3Q3LI67 103 aa3.88□□□□□ -1.79
HPS4-207ENST00000459918 PPDPFLQ8WWR9 84 aa3.88□□□□□ -1.79
HPS4-207ENST00000459918 DLEU1O43261 78 aa3.87□□□□□ -1.79
HPS4-207ENST00000459918 NDUFV3P56181 108 aaKnown RBP3.87□□□□□ -1.79
HPS4-207ENST00000459918 TEN1Q86WV5 123 aa3.87□□□□□ -1.79
HPS4-207ENST00000459918 RAB37Q96AX2 223 aa3.87□□□□□ -1.79
HPS4-207ENST00000459918 PAM16Q9Y3D7 125 aa3.87□□□□□ -1.79
HPS4-207ENST00000459918 SNCGO76070 127 aa3.86□□□□□ -1.79
HPS4-207ENST00000459918 HRES1P13985 223 aa3.86□□□□□ -1.79
HPS4-207ENST00000459918 C2orf91Q6ZV80 131 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms