RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 EPM2AB3EWF7 344 aa6.55□□□□□ -1.36
UFD1-205ENST00000459854 KRTAP10-11P60412 298 aa6.54□□□□□ -1.36
UFD1-205ENST00000459854 OTOGQ6ZRI0 2925 aa6.54□□□□□ -1.36
UFD1-205ENST00000459854 C16orf90A8MZG2 172 aa6.52□□□□□ -1.37
UFD1-205ENST00000459854 K7EIL1 84 aa6.52□□□□□ -1.37
UFD1-205ENST00000459854 Q75L30 129 aa6.52□□□□□ -1.37
UFD1-205ENST00000459854 RBM12B-AS1Q9P1G2 102 aa6.52□□□□□ -1.37
UFD1-205ENST00000459854 C8orf17Q9NRJ1 99 aa6.51□□□□□ -1.37
UFD1-205ENST00000459854 C19orf73Q9NVV2 129 aa6.51□□□□□ -1.37
UFD1-205ENST00000459854 Q5XG85 94 aa6.5□□□□□ -1.37
UFD1-205ENST00000459854 PLA2G2DQ9UNK4 145 aa6.5□□□□□ -1.37
UFD1-205ENST00000459854 SPENQ96T58 3664 aaKnown RBP6.5□□□□□ -1.37
UFD1-205ENST00000459854 IGLV1-50A0A075B6I6 118 aa6.49□□□□□ -1.37
UFD1-205ENST00000459854 ST20-AS1Q8NBB2 130 aa6.49□□□□□ -1.37
UFD1-205ENST00000459854 M0R2N4 97 aa6.48□□□□□ -1.37
UFD1-205ENST00000459854 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
UFD1-205ENST00000459854 MGAM2Q2M2H8 2515 aa6.48□□□□□ -1.37
UFD1-205ENST00000459854 A0A1B0GVX0 72 aa6.47□□□□□ -1.37
UFD1-205ENST00000459854 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
UFD1-205ENST00000459854 IGFL1Q6UW32 110 aa6.46□□□□□ -1.37
UFD1-205ENST00000459854 LY6G6CO95867 125 aa6.45□□□□□ -1.38
UFD1-205ENST00000459854 NIPBLQ6KC79 2804 aaeCLIP6.45□□□□□ -1.385e-6■■■□□ 16.4
UFD1-205ENST00000459854 IGLV8-61A0A075B6I0 122 aa6.45□□□□□ -1.38
UFD1-205ENST00000459854 C1orf134Q5TEV5 83 aa6.45□□□□□ -1.38
UFD1-205ENST00000459854 Q8N377 158 aa6.44□□□□□ -1.38
UFD1-205ENST00000459854 TLX1NBP0CAT3 122 aa6.43□□□□□ -1.38
UFD1-205ENST00000459854 EIF4EBP3O60516 100 aaPredicted RBP6.43□□□□□ -1.38
UFD1-205ENST00000459854 IGLV5-48A0A075B6I7 105 aa6.42□□□□□ -1.38
UFD1-205ENST00000459854 NBPF19A0A087WUL8 3843 aa6.42□□□□□ -1.38
UFD1-205ENST00000459854 WWC2-AS2Q96NR7 200 aa6.42□□□□□ -1.38
UFD1-205ENST00000459854 LINC01558Q9Y6Z2 57 aa6.42□□□□□ -1.38
UFD1-205ENST00000459854 IGLV7-46A0A075B6I9 117 aa6.42□□□□□ -1.38
UFD1-205ENST00000459854 C15orf56Q8N910 161 aa6.41□□□□□ -1.38
UFD1-205ENST00000459854 PRR34Q9NV39 138 aa6.41□□□□□ -1.38
UFD1-205ENST00000459854 SPACA4Q8TDM5 124 aa6.41□□□□□ -1.38
UFD1-205ENST00000459854 ASB16-AS1Q495Z4 193 aa6.41□□□□□ -1.38
UFD1-205ENST00000459854 H3BS24 57 aa6.41□□□□□ -1.38
UFD1-205ENST00000459854 DNAH10OSP0CZ25 163 aa6.41□□□□□ -1.38
UFD1-205ENST00000459854 Q8NAQ8 132 aa6.41□□□□□ -1.38
UFD1-205ENST00000459854 CSNK1G2-AS1Q8NCQ2 148 aa6.4□□□□□ -1.38
UFD1-205ENST00000459854 FAM104AQ969W3 186 aa6.39□□□□□ -1.39
UFD1-205ENST00000459854 PHF5AQ7RTV0 110 aaKnown RBP6.39□□□□□ -1.39
UFD1-205ENST00000459854 MXRA5Q9NR99 2828 aa6.38□□□□□ -1.39
UFD1-205ENST00000459854 FP248Q71RG6 208 aaPredicted RBP6.38□□□□□ -1.39
UFD1-205ENST00000459854 GIG44P09565 113 aaPredicted RBP6.38□□□□□ -1.39
UFD1-205ENST00000459854 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
UFD1-205ENST00000459854 Q96NJ1 140 aa6.36□□□□□ -1.39
UFD1-205ENST00000459854 A0A1W2PNM2 257 aa6.36□□□□□ -1.39
UFD1-205ENST00000459854 C9orf129Q5T035 196 aaKnown RBP6.36□□□□□ -1.39
UFD1-205ENST00000459854 Q8N9P0 234 aaPredicted RBP6.35□□□□□ -1.39
UFD1-205ENST00000459854 SPRR4Q96PI1 79 aa6.35□□□□□ -1.39
UFD1-205ENST00000459854 IGLV5-37A0A075B6J1 123 aa6.35□□□□□ -1.39
UFD1-205ENST00000459854 CSMD1Q96PZ7 3565 aa6.34□□□□□ -1.39
UFD1-205ENST00000459854 LINC00612Q8N6U2 182 aa6.34□□□□□ -1.39
UFD1-205ENST00000459854 DMAC1Q96GE9 116 aa6.34□□□□□ -1.39
UFD1-205ENST00000459854 TYMSOSQ8TAI1 123 aa6.33□□□□□ -1.4
UFD1-205ENST00000459854 NOTCH1P46531 2555 aa6.33□□□□□ -1.4
UFD1-205ENST00000459854 NF1P21359 2839 aa6.33□□□□□ -1.4
UFD1-205ENST00000459854 LINC00588Q9Y4M8 146 aa6.33□□□□□ -1.4
UFD1-205ENST00000459854 APLNQ9ULZ1 77 aa6.32□□□□□ -1.4
UFD1-205ENST00000459854 CELSR1Q9NYQ6 3014 aa6.32□□□□□ -1.4
UFD1-205ENST00000459854 CSMD2Q7Z408 3487 aa6.31□□□□□ -1.4
UFD1-205ENST00000459854 PLA2G1BP04054 148 aaKnown RBP6.31□□□□□ -1.4
UFD1-205ENST00000459854 ANK3Q12955 4377 aaKnown RBP6.3□□□□□ -1.4
UFD1-205ENST00000459854 Q5VV11 94 aa6.3□□□□□ -1.4
UFD1-205ENST00000459854 RTL8CO15255 209 aa6.29□□□□□ -1.4
UFD1-205ENST00000459854 NBDYA0A0U1RRE5 68 aa6.29□□□□□ -1.4
UFD1-205ENST00000459854 C9orf163Q8N9P6 203 aa6.29□□□□□ -1.4
UFD1-205ENST00000459854 DSCR10P59022 87 aa6.28□□□□□ -1.4
UFD1-205ENST00000459854 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
UFD1-205ENST00000459854 FAM168BA1KXE4 195 aa6.27□□□□□ -1.4
UFD1-205ENST00000459854 ZNF861PO60384 105 aa6.27□□□□□ -1.41
UFD1-205ENST00000459854 FAM229BQ4G0N7 80 aa6.26□□□□□ -1.41
UFD1-205ENST00000459854 MUC4Q99102 2169 aa6.25□□□□□ -1.41
UFD1-205ENST00000459854 NBEAL1Q6ZS30 2694 aa6.25□□□□□ -1.41
UFD1-205ENST00000459854 AKAP9Q99996 3911 aa6.23□□□□□ -1.41
UFD1-205ENST00000459854 PRR26Q8N8Z3 221 aa6.23□□□□□ -1.41
UFD1-205ENST00000459854 A0A1B0GU33 70 aa6.23□□□□□ -1.41
UFD1-205ENST00000459854 CHTF8P0CG12 524 aa6.23□□□□□ -1.41
UFD1-205ENST00000459854 CNBPP62633 177 aaKnown RBP6.21□□□□□ -1.41
UFD1-205ENST00000459854 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
UFD1-205ENST00000459854 ZFHX3Q15911 3703 aa6.2□□□□□ -1.42
UFD1-205ENST00000459854 OXTP01178 125 aa6.19□□□□□ -1.42
UFD1-205ENST00000459854 CASC10Q5T4H9 136 aa6.18□□□□□ -1.42
UFD1-205ENST00000459854 FBN1P35555 2871 aaKnown RBP6.18□□□□□ -1.42
UFD1-205ENST00000459854 TENM1Q9UKZ4 2725 aa6.17□□□□□ -1.42
UFD1-205ENST00000459854 LINC00304Q8N9R0 145 aa6.17□□□□□ -1.42
UFD1-205ENST00000459854 ZNF575Q86XF7 245 aa6.17□□□□□ -1.42
UFD1-205ENST00000459854 HRES1P13985 223 aa6.16□□□□□ -1.42
UFD1-205ENST00000459854 CSAG1Q6PB30 78 aa6.16□□□□□ -1.42
UFD1-205ENST00000459854 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
UFD1-205ENST00000459854 LINC00483Q53H64 154 aa6.16□□□□□ -1.42
UFD1-205ENST00000459854 MMP24-AS1A0A0U1RRL7 71 aa6.15□□□□□ -1.42
UFD1-205ENST00000459854 IGLV7-43P04211 117 aa6.13□□□□□ -1.43
UFD1-205ENST00000459854 ZNF469Q96JG9 3925 aaPredicted RBP6.13□□□□□ -1.43
UFD1-205ENST00000459854 TNP2Q05952 138 aa6.12□□□□□ -1.43
UFD1-205ENST00000459854 A0A087X002 238 aa6.11□□□□□ -1.43
UFD1-205ENST00000459854 SPINK7P58062 85 aa6.11□□□□□ -1.43
UFD1-205ENST00000459854 SPRR1AP35321 89 aa6.1□□□□□ -1.43
UFD1-205ENST00000459854 A0A0G2JQZ4 141 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms