RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 CHKB-CPT1BH3BT56 60 aa6.51□□□□□ -1.37
CLIP4-208ENST00000456385 Q8N9P0 234 aaPredicted RBP6.51□□□□□ -1.37
CLIP4-208ENST00000456385 KRTAP29-1A8MX34 341 aaPredicted RBP6.5□□□□□ -1.37
CLIP4-208ENST00000456385 H0Y9P7 68 aa6.5□□□□□ -1.37
CLIP4-208ENST00000456385 HELZ2Q9BYK8 2649 aaKnown RBP6.5□□□□□ -1.37
CLIP4-208ENST00000456385 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
CLIP4-208ENST00000456385 C16orf90A8MZG2 172 aa6.49□□□□□ -1.37
CLIP4-208ENST00000456385 PRLHP81277 87 aa6.49□□□□□ -1.37
CLIP4-208ENST00000456385 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
CLIP4-208ENST00000456385 FBN1P35555 2871 aaKnown RBP6.48□□□□□ -1.37
CLIP4-208ENST00000456385 CASC2Q6XLA1 102 aa6.48□□□□□ -1.37
CLIP4-208ENST00000456385 DEFB131BA0A096LNP1 70 aa6.47□□□□□ -1.37
CLIP4-208ENST00000456385 SPTSSBQ8NFR3 76 aa6.47□□□□□ -1.37
CLIP4-208ENST00000456385 CNBPP62633 177 aaKnown RBP6.47□□□□□ -1.37
CLIP4-208ENST00000456385 SPANXA2-OT1Q8N9U9 137 aa6.47□□□□□ -1.37
CLIP4-208ENST00000456385 NSD1Q96L73 2696 aaPredicted RBP6.46□□□□□ -1.38
CLIP4-208ENST00000456385 DNAH10OSP0CZ25 163 aa6.46□□□□□ -1.38
CLIP4-208ENST00000456385 UBE2AP49459 152 aa6.46□□□□□ -1.38
CLIP4-208ENST00000456385 FLNBO75369 2602 aaKnown RBP6.46□□□□□ -1.38
CLIP4-208ENST00000456385 LCA10Q71F78 164 aa6.45□□□□□ -1.38
CLIP4-208ENST00000456385 LIMD2Q9BT23 127 aa6.45□□□□□ -1.38
CLIP4-208ENST00000456385 DNAH1Q9P2D7 4330 aa6.45□□□□□ -1.38
CLIP4-208ENST00000456385 C9orf163Q8N9P6 203 aa6.44□□□□□ -1.38
CLIP4-208ENST00000456385 LINC00588Q9Y4M8 146 aa6.44□□□□□ -1.38
CLIP4-208ENST00000456385 CD164Q04900 197 aa6.44□□□□□ -1.38
CLIP4-208ENST00000456385 IGLV8-61A0A075B6I0 122 aa6.43□□□□□ -1.38
CLIP4-208ENST00000456385 IGKV2-24A0A0C4DH68 120 aa6.43□□□□□ -1.38
CLIP4-208ENST00000456385 LYSTQ99698 3801 aa6.42□□□□□ -1.38
CLIP4-208ENST00000456385 INAFM1C9JVW0 142 aa6.42□□□□□ -1.38
CLIP4-208ENST00000456385 KRTAP10-11P60412 298 aa6.42□□□□□ -1.38
CLIP4-208ENST00000456385 COA5Q86WW8 74 aa6.42□□□□□ -1.38
CLIP4-208ENST00000456385 DNAH10Q8IVF4 4471 aa6.42□□□□□ -1.38
CLIP4-208ENST00000456385 A6NED7 52 aa6.42□□□□□ -1.38
CLIP4-208ENST00000456385 C11orf45Q8TAV5 145 aa6.42□□□□□ -1.38
CLIP4-208ENST00000456385 A8MWP4 228 aa6.41□□□□□ -1.38
CLIP4-208ENST00000456385 H3BPC8 53 aa6.41□□□□□ -1.38
CLIP4-208ENST00000456385 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
CLIP4-208ENST00000456385 LINC00472Q9H8W2 130 aa6.41□□□□□ -1.38
CLIP4-208ENST00000456385 A0A096LNI7 61 aa6.4□□□□□ -1.38
CLIP4-208ENST00000456385 MAST4O15021 2626 aa6.4□□□□□ -1.39
CLIP4-208ENST00000456385 COL7A1Q02388 2944 aa6.4□□□□□ -1.39
CLIP4-208ENST00000456385 TENM2Q9NT68 2774 aa6.39□□□□□ -1.39
CLIP4-208ENST00000456385 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
CLIP4-208ENST00000456385 Q75L30 129 aa6.39□□□□□ -1.39
CLIP4-208ENST00000456385 HECTD1Q9ULT8 2610 aa6.39□□□□□ -1.39
CLIP4-208ENST00000456385 H0Y9J4 135 aa6.39□□□□□ -1.39
CLIP4-208ENST00000456385 KRTAP11-1Q8IUC1 163 aa6.38□□□□□ -1.39
CLIP4-208ENST00000456385 IGLV7-46A0A075B6I9 117 aa6.38□□□□□ -1.39
CLIP4-208ENST00000456385 LOC101927531A0A1B0GV80 90 aa6.38□□□□□ -1.39
CLIP4-208ENST00000456385 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
CLIP4-208ENST00000456385 RBM12B-AS1Q9P1G2 102 aa6.38□□□□□ -1.39
CLIP4-208ENST00000456385 MMP24-AS1A0A0U1RRL7 71 aa6.37□□□□□ -1.39
CLIP4-208ENST00000456385 SPAG11AQ6PDA7 123 aa6.37□□□□□ -1.39
CLIP4-208ENST00000456385 A6NN06 94 aa6.36□□□□□ -1.39
CLIP4-208ENST00000456385 NOTCH1P46531 2555 aa6.35□□□□□ -1.39
CLIP4-208ENST00000456385 PHF5AQ7RTV0 110 aaKnown RBP6.34□□□□□ -1.39
CLIP4-208ENST00000456385 CDC42SE1Q9NRR8 79 aa6.33□□□□□ -1.4
CLIP4-208ENST00000456385 CHTF8P0CG12 524 aa6.33□□□□□ -1.4
CLIP4-208ENST00000456385 COL6A5A8TX70 2615 aa6.33□□□□□ -1.4
CLIP4-208ENST00000456385 SPINK7P58062 85 aa6.31□□□□□ -1.4
CLIP4-208ENST00000456385 MOBPQ13875 183 aa6.31□□□□□ -1.4
CLIP4-208ENST00000456385 STAB1Q9NY15 2570 aa6.3□□□□□ -1.4
CLIP4-208ENST00000456385 SPRR1BP22528 89 aa6.3□□□□□ -1.4
CLIP4-208ENST00000456385 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
CLIP4-208ENST00000456385 NBEAL1Q6ZS30 2694 aa6.3□□□□□ -1.4
CLIP4-208ENST00000456385 PLAC8Q9NZF1 115 aa6.3□□□□□ -1.4
CLIP4-208ENST00000456385 KMT2BQ9UMN6 2715 aaPredicted RBP6.29□□□□□ -1.4
CLIP4-208ENST00000456385 CMYA5Q8N3K9 4069 aa6.29□□□□□ -1.4
CLIP4-208ENST00000456385 DNAH9Q9NYC9 4486 aa6.29□□□□□ -1.4
CLIP4-208ENST00000456385 KRTAP1-5Q9BYS1 174 aa6.29□□□□□ -1.4
CLIP4-208ENST00000456385 NDUFS5O43920 106 aa6.28□□□□□ -1.4
CLIP4-208ENST00000456385 Q96NJ1 140 aa6.28□□□□□ -1.4
CLIP4-208ENST00000456385 HRES1P13985 223 aa6.28□□□□□ -1.4
CLIP4-208ENST00000456385 ASB16-AS1Q495Z4 193 aa6.27□□□□□ -1.41
CLIP4-208ENST00000456385 IGLV9-49A0A0B4J1Y8 123 aa6.26□□□□□ -1.41
CLIP4-208ENST00000456385 Q6ZR54 194 aa6.26□□□□□ -1.41
CLIP4-208ENST00000456385 TP53AIP1Q9HCN2 124 aa6.25□□□□□ -1.41
CLIP4-208ENST00000456385 IGHV6-1A0A0B4J1U7 121 aa6.25□□□□□ -1.41
CLIP4-208ENST00000456385 C7orf65Q6ZTY9 151 aa6.25□□□□□ -1.41
CLIP4-208ENST00000456385 C8orf17Q9NRJ1 99 aa6.25□□□□□ -1.41
CLIP4-208ENST00000456385 K7EIL1 84 aa6.23□□□□□ -1.41
CLIP4-208ENST00000456385 A0A087X002 238 aa6.22□□□□□ -1.41
CLIP4-208ENST00000456385 NOTCH2NLQ7Z3S9 236 aa6.22□□□□□ -1.41
CLIP4-208ENST00000456385 DNAH3Q8TD57 4116 aa6.22□□□□□ -1.41
CLIP4-208ENST00000456385 PRR26Q8N8Z3 221 aa6.22□□□□□ -1.41
CLIP4-208ENST00000456385 DNAH7Q8WXX0 4024 aa6.22□□□□□ -1.41
CLIP4-208ENST00000456385 PANO1I0J062 215 aa6.21□□□□□ -1.41
CLIP4-208ENST00000456385 HUWE1Q7Z6Z7 4374 aaKnown RBP6.21□□□□□ -1.42
CLIP4-208ENST00000456385 J3QKU1 62 aa6.2□□□□□ -1.42
CLIP4-208ENST00000456385 A0A1B0GVX0 72 aa6.19□□□□□ -1.42
CLIP4-208ENST00000456385 KRTAP13-1Q8IUC0 172 aa6.19□□□□□ -1.42
CLIP4-208ENST00000456385 STAB2Q8WWQ8 2551 aa6.18□□□□□ -1.42
CLIP4-208ENST00000456385 MRPL34Q9BQ48 92 aaKnown RBP6.18□□□□□ -1.42
CLIP4-208ENST00000456385 FRAS1Q86XX4 4008 aa6.17□□□□□ -1.42
CLIP4-208ENST00000456385 Q5W150 140 aa6.16□□□□□ -1.42
CLIP4-208ENST00000456385 PRAC1Q96KF2 57 aa6.16□□□□□ -1.42
CLIP4-208ENST00000456385 ANAPC11Q9NYG5 84 aa6.16□□□□□ -1.42
CLIP4-208ENST00000456385 LINC00313P59037 77 aa6.15□□□□□ -1.42
CLIP4-208ENST00000456385 CDK2AP2O75956 126 aa6.14□□□□□ -1.43
CLIP4-208ENST00000456385 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms