RNA–Protein interactions for RNA: ENST00000455228.1

LINC01940-201, Transcript of long intergenic non-protein coding RNA 1940, humanhuman

TSL 2 BASIC

Gene LINC01940, Length 3,489 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01940-201ENST00000455228 WFDC10BQ8IUB3 73 aa6.21□□□□□ -1.42
LINC01940-201ENST00000455228 SMR3AQ99954 134 aa6.21□□□□□ -1.42
LINC01940-201ENST00000455228 FAM30AQ9NZY2 134 aa6.2□□□□□ -1.42
LINC01940-201ENST00000455228 ADM2Q7Z4H4 148 aa6.19□□□□□ -1.42
LINC01940-201ENST00000455228 SPINK7P58062 85 aa6.19□□□□□ -1.42
LINC01940-201ENST00000455228 ST20-AS1Q8NBB2 130 aa6.19□□□□□ -1.42
LINC01940-201ENST00000455228 IGLV7-46A0A075B6I9 117 aa6.19□□□□□ -1.42
LINC01940-201ENST00000455228 IGKV2D-24A0A075B6R9 120 aa6.19□□□□□ -1.42
LINC01940-201ENST00000455228 KPRPQ5T749 579 aaPredicted RBP6.18□□□□□ -1.42
LINC01940-201ENST00000455228 STAB1Q9NY15 2570 aa6.17□□□□□ -1.42
LINC01940-201ENST00000455228 RETNLBQ9BQ08 111 aa6.17□□□□□ -1.42
LINC01940-201ENST00000455228 C15orf56Q8N910 161 aa6.16□□□□□ -1.42
LINC01940-201ENST00000455228 PRB2P02812 416 aaPredicted RBP6.16□□□□□ -1.42
LINC01940-201ENST00000455228 COL6A5A8TX70 2615 aa6.16□□□□□ -1.42
LINC01940-201ENST00000455228 COA5Q86WW8 74 aa6.15□□□□□ -1.42
LINC01940-201ENST00000455228 HIVEP1P15822 2718 aa6.15□□□□□ -1.42
LINC01940-201ENST00000455228 ALMS1Q8TCU4 4167 aa6.15□□□□□ -1.42
LINC01940-201ENST00000455228 ROMO1P60602 79 aa6.15□□□□□ -1.43
LINC01940-201ENST00000455228 Q8N377 158 aa6.14□□□□□ -1.43
LINC01940-201ENST00000455228 IGLV5-48A0A075B6I7 105 aa6.14□□□□□ -1.43
LINC01940-201ENST00000455228 RPL37AP8A6NKH3 93 aa6.14□□□□□ -1.43
LINC01940-201ENST00000455228 NBEAL1Q6ZS30 2694 aa6.13□□□□□ -1.43
LINC01940-201ENST00000455228 C7orf33Q8WU49 177 aa6.13□□□□□ -1.43
LINC01940-201ENST00000455228 PDZD2O15018 2839 aa6.13□□□□□ -1.43
LINC01940-201ENST00000455228 KRTAP26-1Q6PEX3 210 aa6.13□□□□□ -1.43
LINC01940-201ENST00000455228 DHRS4-AS1Q9P1J3 65 aa6.13□□□□□ -1.43
LINC01940-201ENST00000455228 DSCR10P59022 87 aa6.12□□□□□ -1.43
LINC01940-201ENST00000455228 C1orf137Q5JT78 98 aa6.12□□□□□ -1.43
LINC01940-201ENST00000455228 Q6ZR54 194 aa6.12□□□□□ -1.43
LINC01940-201ENST00000455228 SPATA8Q6RVD6 105 aa6.12□□□□□ -1.43
LINC01940-201ENST00000455228 TENM1Q9UKZ4 2725 aa6.11□□□□□ -1.43
LINC01940-201ENST00000455228 OTOGQ6ZRI0 2925 aa6.1□□□□□ -1.43
LINC01940-201ENST00000455228 H3BNG1 76 aa6.1□□□□□ -1.43
LINC01940-201ENST00000455228 Q6ZRX8 168 aa6.1□□□□□ -1.43
LINC01940-201ENST00000455228 SPRR4Q96PI1 79 aa6.1□□□□□ -1.43
LINC01940-201ENST00000455228 MGAM2Q2M2H8 2515 aa6.1□□□□□ -1.43
LINC01940-201ENST00000455228 KRTAP29-1A8MX34 341 aaPredicted RBP6.09□□□□□ -1.43
LINC01940-201ENST00000455228 INAFM1C9JVW0 142 aa6.09□□□□□ -1.43
LINC01940-201ENST00000455228 ANK3Q12955 4377 aaKnown RBP6.09□□□□□ -1.43
LINC01940-201ENST00000455228 LINC01556Q5JQF7 62 aa6.08□□□□□ -1.44
LINC01940-201ENST00000455228 Q8NBF4 154 aa6.08□□□□□ -1.44
LINC01940-201ENST00000455228 PKD1L1Q8TDX9 2849 aa6.07□□□□□ -1.44
LINC01940-201ENST00000455228 FAM168BA1KXE4 195 aa6.07□□□□□ -1.44
LINC01940-201ENST00000455228 H0Y9P7 68 aa6.07□□□□□ -1.44
LINC01940-201ENST00000455228 DEFB131BA0A096LNP1 70 aa6.07□□□□□ -1.44
LINC01940-201ENST00000455228 IGLV5-37A0A075B6J1 123 aa6.06□□□□□ -1.44
LINC01940-201ENST00000455228 C1orf134Q5TEV5 83 aa6.06□□□□□ -1.44
LINC01940-201ENST00000455228 PRR4Q16378 134 aa6.06□□□□□ -1.44
LINC01940-201ENST00000455228 K7EQZ3 153 aa6.05□□□□□ -1.44
LINC01940-201ENST00000455228 TNP2Q05952 138 aa6.05□□□□□ -1.44
LINC01940-201ENST00000455228 IGLV1-50A0A075B6I6 118 aa6.05□□□□□ -1.44
LINC01940-201ENST00000455228 CSAG1Q6PB30 78 aa6.05□□□□□ -1.44
LINC01940-201ENST00000455228 NSD1Q96L73 2696 aaPredicted RBP6.03□□□□□ -1.44
LINC01940-201ENST00000455228 TLX1NBP0CAT3 122 aa6.02□□□□□ -1.44
LINC01940-201ENST00000455228 PLA2G2DQ9UNK4 145 aa6.02□□□□□ -1.44
LINC01940-201ENST00000455228 DEFB116Q30KQ4 102 aa6.02□□□□□ -1.45
LINC01940-201ENST00000455228 KRTAP4-16G5E9R7 235 aaPredicted RBP6.02□□□□□ -1.45
LINC01940-201ENST00000455228 TRRAPQ9Y4A5 3859 aa6.01□□□□□ -1.45
LINC01940-201ENST00000455228 WFDC13Q8IUB5 93 aa6.01□□□□□ -1.45
LINC01940-201ENST00000455228 SPRR1AP35321 89 aa6.01□□□□□ -1.45
LINC01940-201ENST00000455228 A0A0G2JQZ4 141 aa6□□□□□ -1.45
LINC01940-201ENST00000455228 A0A1W2PNN7 141 aa6□□□□□ -1.45
LINC01940-201ENST00000455228 P0C880 135 aa6□□□□□ -1.45
LINC01940-201ENST00000455228 DNAH10OSP0CZ25 163 aa6□□□□□ -1.45
LINC01940-201ENST00000455228 REG3GQ6UW15 175 aa6□□□□□ -1.45
LINC01940-201ENST00000455228 CASC10Q5T4H9 136 aa5.99□□□□□ -1.45
LINC01940-201ENST00000455228 TENM3Q9P273 2699 aa5.99□□□□□ -1.45
LINC01940-201ENST00000455228 A0A087WSZ3 146 aa5.99□□□□□ -1.45
LINC01940-201ENST00000455228 KRTAP10-11P60412 298 aa5.98□□□□□ -1.45
LINC01940-201ENST00000455228 NOTCH1P46531 2555 aa5.97□□□□□ -1.45
LINC01940-201ENST00000455228 ZNF861PO60384 105 aa5.97□□□□□ -1.45
LINC01940-201ENST00000455228 SPAG11AQ6PDA7 123 aa5.97□□□□□ -1.45
LINC01940-201ENST00000455228 IGFL1Q6UW32 110 aa5.97□□□□□ -1.45
LINC01940-201ENST00000455228 IGKV2-24A0A0C4DH68 120 aa5.96□□□□□ -1.45
LINC01940-201ENST00000455228 PRLHP81277 87 aa5.96□□□□□ -1.45
LINC01940-201ENST00000455228 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.45
LINC01940-201ENST00000455228 HRES1P13985 223 aa5.94□□□□□ -1.46
LINC01940-201ENST00000455228 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
LINC01940-201ENST00000455228 RPL37AP61513 92 aaKnown RBP5.94□□□□□ -1.46
LINC01940-201ENST00000455228 MIR22HGQ0VDD5 57 aa5.91□□□□□ -1.46
LINC01940-201ENST00000455228 J3QL48 77 aa5.91□□□□□ -1.46
LINC01940-201ENST00000455228 A0A096LNI7 61 aa5.9□□□□□ -1.47
LINC01940-201ENST00000455228 LINC00483Q53H64 154 aa5.88□□□□□ -1.47
LINC01940-201ENST00000455228 FBN1P35555 2871 aaKnown RBP5.88□□□□□ -1.47
LINC01940-201ENST00000455228 IGLV8-61A0A075B6I0 122 aa5.87□□□□□ -1.47
LINC01940-201ENST00000455228 A8MWP4 228 aa5.86□□□□□ -1.47
LINC01940-201ENST00000455228 CHTF8P0CG12 524 aa5.83□□□□□ -1.48
LINC01940-201ENST00000455228 KRTAP16-1A8MUX0 517 aa5.83□□□□□ -1.48
LINC01940-201ENST00000455228 SRRM2Q9UQ35 2752 aaKnown RBP5.82□□□□□ -1.48
LINC01940-201ENST00000455228 IGLV5-52A0A0A0MRZ9 124 aa5.82□□□□□ -1.48
LINC01940-201ENST00000455228 UBE2DNLQ8IWF7 75 aa5.82□□□□□ -1.48
LINC01940-201ENST00000455228 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.82□□□□□ -1.48
LINC01940-201ENST00000455228 UQCR11O14957 56 aa5.82□□□□□ -1.48
LINC01940-201ENST00000455228 LINC00472Q9H8W2 130 aa5.81□□□□□ -1.48
LINC01940-201ENST00000455228 TP53AIP1Q9HCN2 124 aa5.81□□□□□ -1.48
LINC01940-201ENST00000455228 PCOTHQ58A44 107 aa5.8□□□□□ -1.48
LINC01940-201ENST00000455228 KRTAP24-1Q3LI83 254 aa5.79□□□□□ -1.48
LINC01940-201ENST00000455228 C14orf177Q52M58 125 aa5.79□□□□□ -1.48
LINC01940-201ENST00000455228 CDK2AP2O75956 126 aa5.79□□□□□ -1.48
LINC01940-201ENST00000455228 KRTAP11-1Q8IUC1 163 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms