RNA–Protein interactions for RNA: ENST00000453796.1

HSPG2-207, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 621 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-207ENST00000453796 FAT4Q6V0I7 4981 aa8.01□□□□□ -1.13
HSPG2-207ENST00000453796 BVES-AS1Q5T3Y7 98 aa8.01□□□□□ -1.13
HSPG2-207ENST00000453796 LCE2AQ5TA79 106 aaPredicted RBP8.01□□□□□ -1.13
HSPG2-207ENST00000453796 KRTAP4-1Q9BYQ7 146 aa8□□□□□ -1.13
HSPG2-207ENST00000453796 SEC61BP60468 96 aaKnown RBP7.99□□□□□ -1.13
HSPG2-207ENST00000453796 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.99□□□□□ -1.13
HSPG2-207ENST00000453796 IGLV8-61A0A075B6I0 122 aa7.98□□□□□ -1.13
HSPG2-207ENST00000453796 A0A0B4J2C4 111 aa7.98□□□□□ -1.13
HSPG2-207ENST00000453796 C1orf195Q5TG92 126 aa7.98□□□□□ -1.13
HSPG2-207ENST00000453796 F8WEM9 126 aa7.96□□□□□ -1.14
HSPG2-207ENST00000453796 PYY3Q5JQD4 70 aa7.96□□□□□ -1.14
HSPG2-207ENST00000453796 CEND1Q8N111 149 aa7.96□□□□□ -1.14
HSPG2-207ENST00000453796 PPDPFLQ8WWR9 84 aa7.95□□□□□ -1.14
HSPG2-207ENST00000453796 RAB37Q96AX2 223 aa7.95□□□□□ -1.14
HSPG2-207ENST00000453796 Q6JHZ5 121 aa7.94□□□□□ -1.14
HSPG2-207ENST00000453796 IGFL1Q6UW32 110 aa7.94□□□□□ -1.14
HSPG2-207ENST00000453796 C9orf92A6NGG3 77 aa7.93□□□□□ -1.14
HSPG2-207ENST00000453796 OCIAD2Q56VL3 154 aa7.93□□□□□ -1.14
HSPG2-207ENST00000453796 CLEC2BQ92478 149 aa7.93□□□□□ -1.14
HSPG2-207ENST00000453796 FAM218AQ96MZ4 157 aa7.93□□□□□ -1.14
HSPG2-207ENST00000453796 FXYD2P54710 66 aa7.92□□□□□ -1.14
HSPG2-207ENST00000453796 H0YGX0 51 aa7.91□□□□□ -1.14
HSPG2-207ENST00000453796 TMEM238LA0A1B0GVL6 79 aa7.9□□□□□ -1.14
HSPG2-207ENST00000453796 A6NJY4 79 aa7.9□□□□□ -1.14
HSPG2-207ENST00000453796 TCL1BO95988 128 aa7.9□□□□□ -1.14
HSPG2-207ENST00000453796 PRO1854Q9UHT4 67 aa7.9□□□□□ -1.14
HSPG2-207ENST00000453796 TRBV7-7A0A0K0K1E9 115 aa7.89□□□□□ -1.15
HSPG2-207ENST00000453796 SNHG12Q9BXW3 62 aa7.88□□□□□ -1.15
HSPG2-207ENST00000453796 A0A1B0GX51 115 aa7.86□□□□□ -1.15
HSPG2-207ENST00000453796 H3BUT2 72 aa7.86□□□□□ -1.15
HSPG2-207ENST00000453796 TMA7Q9Y2S6 64 aaKnown RBP7.86□□□□□ -1.15
HSPG2-207ENST00000453796 TRIAP1O43715 76 aa7.85□□□□□ -1.15
HSPG2-207ENST00000453796 SNCGO76070 127 aa7.85□□□□□ -1.15
HSPG2-207ENST00000453796 HSD52Q0P140 79 aa7.85□□□□□ -1.15
HSPG2-207ENST00000453796 PCOTHQ58A44 107 aa7.85□□□□□ -1.15
HSPG2-207ENST00000453796 NDUFV3P56181 108 aaKnown RBP7.83□□□□□ -1.16
HSPG2-207ENST00000453796 Q6Q795 121 aa7.83□□□□□ -1.16
HSPG2-207ENST00000453796 RPL37P61927 97 aaKnown RBP7.81□□□□□ -1.16
HSPG2-207ENST00000453796 K7ERJ3 54 aa7.8□□□□□ -1.16
HSPG2-207ENST00000453796 KRTAP19-2Q3LHN2 52 aa7.8□□□□□ -1.16
HSPG2-207ENST00000453796 UQCR10Q9UDW1 63 aa7.8□□□□□ -1.16
HSPG2-207ENST00000453796 LCE2CQ5TA81 110 aa7.79□□□□□ -1.16
HSPG2-207ENST00000453796 GHRHP01286 108 aa7.78□□□□□ -1.16
HSPG2-207ENST00000453796 TEN1Q86WV5 123 aa7.78□□□□□ -1.16
HSPG2-207ENST00000453796 H3BMG7 143 aa7.77□□□□□ -1.17
HSPG2-207ENST00000453796 LST1O00453 97 aa7.76□□□□□ -1.17
HSPG2-207ENST00000453796 FABP2P12104 132 aa7.76□□□□□ -1.17
HSPG2-207ENST00000453796 SS18L2Q9UHA2 77 aa7.75□□□□□ -1.17
HSPG2-207ENST00000453796 PSMB2P49721 201 aa7.74□□□□□ -1.17
HSPG2-207ENST00000453796 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
HSPG2-207ENST00000453796 A0A087WSZ3 146 aa7.73□□□□□ -1.17
HSPG2-207ENST00000453796 A0A1W2PNM2 257 aa7.73□□□□□ -1.17
HSPG2-207ENST00000453796 Q96NJ1 140 aa7.73□□□□□ -1.17
HSPG2-207ENST00000453796 ORMDL1Q9P0S3 153 aa7.73□□□□□ -1.17
HSPG2-207ENST00000453796 DNAL4O96015 105 aa7.72□□□□□ -1.17
HSPG2-207ENST00000453796 COX6CP09669 75 aa7.72□□□□□ -1.17
HSPG2-207ENST00000453796 H3BQ85 93 aa7.71□□□□□ -1.18
HSPG2-207ENST00000453796 OBSCN-AS1Q96MR7 158 aa7.71□□□□□ -1.18
HSPG2-207ENST00000453796 TMEM256-PLSCR3K7ERE1 68 aa7.69□□□□□ -1.18
HSPG2-207ENST00000453796 Q75L30 129 aa7.69□□□□□ -1.18
HSPG2-207ENST00000453796 TRACP01848 142 aa7.67□□□□□ -1.18
HSPG2-207ENST00000453796 MT1HP80294 61 aa7.67□□□□□ -1.18
HSPG2-207ENST00000453796 TRBV7-4A0A0J9YYF1 115 aa7.66□□□□□ -1.18
HSPG2-207ENST00000453796 UBE2V1Q13404 147 aa7.66□□□□□ -1.18
HSPG2-207ENST00000453796 ANKRD29Q8N6D5 301 aa7.66□□□□□ -1.18
HSPG2-207ENST00000453796 A0A1B0GV72 72 aa7.65□□□□□ -1.18
HSPG2-207ENST00000453796 C20orf166-AS1Q96NR2 134 aa7.63□□□□□ -1.19
HSPG2-207ENST00000453796 SCGB1C2P0DMR2 95 aa7.62□□□□□ -1.19
HSPG2-207ENST00000453796 A8MUU9 505 aa7.61□□□□□ -1.19
HSPG2-207ENST00000453796 CCKP06307 115 aa7.61□□□□□ -1.19
HSPG2-207ENST00000453796 ATP11AUNQ6ZP68 121 aa7.61□□□□□ -1.19
HSPG2-207ENST00000453796 FLGP20930 4061 aaPredicted RBP7.61□□□□□ -1.19
HSPG2-207ENST00000453796 SMIM6P0DI80 62 aa7.6□□□□□ -1.19
HSPG2-207ENST00000453796 M0R143 59 aa7.59□□□□□ -1.19
HSPG2-207ENST00000453796 SIGMAR1Q99720 223 aa7.59□□□□□ -1.19
HSPG2-207ENST00000453796 LINC00472Q9H8W2 130 aa7.59□□□□□ -1.19
HSPG2-207ENST00000453796 DSCR10P59022 87 aa7.58□□□□□ -1.2
HSPG2-207ENST00000453796 IGKV4-1P06312 121 aa7.57□□□□□ -1.2
HSPG2-207ENST00000453796 RBM3P98179 157 aaKnown RBP7.57□□□□□ -1.2
HSPG2-207ENST00000453796 BAALC-AS2P0C853 105 aa7.56□□□□□ -1.2
HSPG2-207ENST00000453796 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
HSPG2-207ENST00000453796 LCE2DQ5TA82 110 aaPredicted RBP7.55□□□□□ -1.2
HSPG2-207ENST00000453796 NAA38Q9BRA0 125 aaKnown RBP7.55□□□□□ -1.2
HSPG2-207ENST00000453796 LINC00313P59037 77 aa7.54□□□□□ -1.2
HSPG2-207ENST00000453796 DEFB116Q30KQ4 102 aa7.54□□□□□ -1.2
HSPG2-207ENST00000453796 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
HSPG2-207ENST00000453796 NOTCH2NLQ7Z3S9 236 aa7.53□□□□□ -1.2
HSPG2-207ENST00000453796 DSCR8Q96T75 97 aa7.53□□□□□ -1.2
HSPG2-207ENST00000453796 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
HSPG2-207ENST00000453796 ATXN8Q156A1 80 aa7.52□□□□□ -1.21
HSPG2-207ENST00000453796 VPS25Q9BRG1 176 aa7.52□□□□□ -1.21
HSPG2-207ENST00000453796 KRTAP10-6P60371 365 aaPredicted RBP7.51□□□□□ -1.21
HSPG2-207ENST00000453796 C9JAW5 83 aa7.5□□□□□ -1.21
HSPG2-207ENST00000453796 LOC105371267A0A1B0GV96 52 aa7.48□□□□□ -1.21
HSPG2-207ENST00000453796 TSTD3H0UI37 97 aa7.48□□□□□ -1.21
HSPG2-207ENST00000453796 IGHV6-1A0A0B4J1U7 121 aa7.47□□□□□ -1.21
HSPG2-207ENST00000453796 C21orf62-AS1Q17RA5 79 aa7.47□□□□□ -1.21
HSPG2-207ENST00000453796 Q6ZQT0 140 aa7.47□□□□□ -1.21
HSPG2-207ENST00000453796 JMJD7-PLA2G4BH0Y9G9 81 aa7.46□□□□□ -1.22
HSPG2-207ENST00000453796 LOC110117498A0A087WWA1 95 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 118.9 ms