RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 C2CD3Q4AC94 2353 aa5.29□□□□□ -1.56
SMCO1-202ENST00000452776 C15orf56Q8N910 161 aa5.29□□□□□ -1.56
SMCO1-202ENST00000452776 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
SMCO1-202ENST00000452776 SPTAN1Q13813 2472 aaKnown RBP5.29□□□□□ -1.56
SMCO1-202ENST00000452776 SPART-AS1P0CW21 52 aa5.28□□□□□ -1.56
SMCO1-202ENST00000452776 KRTAP26-1Q6PEX3 210 aa5.28□□□□□ -1.56
SMCO1-202ENST00000452776 LINC00472Q9H8W2 130 aa5.28□□□□□ -1.56
SMCO1-202ENST00000452776 ABCA2Q9BZC7 2435 aa5.28□□□□□ -1.56
SMCO1-202ENST00000452776 H3BNG1 76 aa5.27□□□□□ -1.57
SMCO1-202ENST00000452776 ACYP2P14621 99 aa5.27□□□□□ -1.57
SMCO1-202ENST00000452776 CFAP46Q8IYW2 2715 aa5.27□□□□□ -1.57
SMCO1-202ENST00000452776 RPL37AP61513 92 aaKnown RBP5.27□□□□□ -1.57
SMCO1-202ENST00000452776 PCOTHQ58A44 107 aa5.27□□□□□ -1.57
SMCO1-202ENST00000452776 IGKV2-24A0A0C4DH68 120 aa5.26□□□□□ -1.57
SMCO1-202ENST00000452776 REG3GQ6UW15 175 aa5.26□□□□□ -1.57
SMCO1-202ENST00000452776 MMP24-AS1A0A0U1RRL7 71 aa5.25□□□□□ -1.57
SMCO1-202ENST00000452776 ACACAQ13085 2346 aa5.25□□□□□ -1.57
SMCO1-202ENST00000452776 HRNRQ86YZ3 2850 aaPredicted RBP5.25□□□□□ -1.57
SMCO1-202ENST00000452776 LAMA5O15230 3695 aa5.25□□□□□ -1.57
SMCO1-202ENST00000452776 UBR5O95071 2799 aaPredicted RBP5.25□□□□□ -1.57
SMCO1-202ENST00000452776 ITPR3Q14573 2671 aa5.24□□□□□ -1.57
SMCO1-202ENST00000452776 H0Y9J4 135 aa5.24□□□□□ -1.57
SMCO1-202ENST00000452776 UQCR11O14957 56 aa5.23□□□□□ -1.57
SMCO1-202ENST00000452776 BOD1L1Q8NFC6 3051 aa5.23□□□□□ -1.57
SMCO1-202ENST00000452776 A0A1B0GU69 56 aa5.22□□□□□ -1.57
SMCO1-202ENST00000452776 SPRR1BP22528 89 aa5.22□□□□□ -1.57
SMCO1-202ENST00000452776 MAP1AP78559 2803 aaPredicted RBP5.22□□□□□ -1.57
SMCO1-202ENST00000452776 J3QKU1 62 aa5.21□□□□□ -1.58
SMCO1-202ENST00000452776 MIR22HGQ0VDD5 57 aa5.21□□□□□ -1.58
SMCO1-202ENST00000452776 ADM2Q7Z4H4 148 aa5.2□□□□□ -1.58
SMCO1-202ENST00000452776 LINC01556Q5JQF7 62 aa5.19□□□□□ -1.58
SMCO1-202ENST00000452776 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
SMCO1-202ENST00000452776 FBN2P35556 2912 aa5.19□□□□□ -1.58
SMCO1-202ENST00000452776 HTN3P15516 51 aa5.18□□□□□ -1.58
SMCO1-202ENST00000452776 CSAG1Q6PB30 78 aa5.18□□□□□ -1.58
SMCO1-202ENST00000452776 C8orf17Q9NRJ1 99 aa5.18□□□□□ -1.58
SMCO1-202ENST00000452776 NOTCH2Q04721 2471 aa5.17□□□□□ -1.58
SMCO1-202ENST00000452776 FBN3Q75N90 2809 aa5.17□□□□□ -1.58
SMCO1-202ENST00000452776 NOTCH3Q9UM47 2321 aa5.17□□□□□ -1.58
SMCO1-202ENST00000452776 COL12A1Q99715 3063 aa5.17□□□□□ -1.58
SMCO1-202ENST00000452776 CDK2AP2O75956 126 aa5.16□□□□□ -1.58
SMCO1-202ENST00000452776 LCE4AQ5TA78 99 aa5.16□□□□□ -1.58
SMCO1-202ENST00000452776 MRPL34Q9BQ48 92 aaKnown RBP5.16□□□□□ -1.58
SMCO1-202ENST00000452776 CELSR1Q9NYQ6 3014 aa5.15□□□□□ -1.58
SMCO1-202ENST00000452776 BSNQ9UPA5 3926 aa5.15□□□□□ -1.59
SMCO1-202ENST00000452776 DEFB135Q30KP9 77 aa5.15□□□□□ -1.59
SMCO1-202ENST00000452776 TLN1Q9Y490 2541 aaKnown RBP5.14□□□□□ -1.59
SMCO1-202ENST00000452776 FAM168BA1KXE4 195 aa5.13□□□□□ -1.59
SMCO1-202ENST00000452776 DEFB4AO15263 64 aa5.13□□□□□ -1.59
SMCO1-202ENST00000452776 C1orf134Q5TEV5 83 aa5.13□□□□□ -1.59
SMCO1-202ENST00000452776 IGHV6-1A0A0B4J1U7 121 aa5.13□□□□□ -1.59
SMCO1-202ENST00000452776 A0A1B0GVX0 72 aa5.13□□□□□ -1.59
SMCO1-202ENST00000452776 DMAC1Q96GE9 116 aa5.13□□□□□ -1.59
SMCO1-202ENST00000452776 ZNF706Q9Y5V0 76 aaPredicted RBP5.13□□□□□ -1.59
SMCO1-202ENST00000452776 CSPG4Q6UVK1 2322 aa5.13□□□□□ -1.59
SMCO1-202ENST00000452776 A0A0G2JQZ4 141 aa5.12□□□□□ -1.59
SMCO1-202ENST00000452776 A0A1W2PNN7 141 aa5.12□□□□□ -1.59
SMCO1-202ENST00000452776 MAPK1IP1LQ8NDC0 245 aa5.12□□□□□ -1.59
SMCO1-202ENST00000452776 SVEP1Q4LDE5 3571 aa5.12□□□□□ -1.59
SMCO1-202ENST00000452776 RELNP78509 3460 aa5.11□□□□□ -1.59
SMCO1-202ENST00000452776 LCE5AQ5TCM9 118 aa5.11□□□□□ -1.59
SMCO1-202ENST00000452776 NOTCH2NLQ7Z3S9 236 aa5.11□□□□□ -1.59
SMCO1-202ENST00000452776 KRTAP7-1Q8IUC3 87 aa5.11□□□□□ -1.59
SMCO1-202ENST00000452776 DNAH10OSP0CZ25 163 aa5.1□□□□□ -1.59
SMCO1-202ENST00000452776 ROMO1P60602 79 aa5.1□□□□□ -1.59
SMCO1-202ENST00000452776 ZNF861PO60384 105 aa5.09□□□□□ -1.59
SMCO1-202ENST00000452776 SETD2Q9BYW2 2564 aaPredicted RBP5.09□□□□□ -1.6
SMCO1-202ENST00000452776 SPG11Q96JI7 2443 aa5.08□□□□□ -1.6
SMCO1-202ENST00000452776 ATMQ13315 3056 aa5.08□□□□□ -1.6
SMCO1-202ENST00000452776 POLQO75417 2590 aa5.07□□□□□ -1.6
SMCO1-202ENST00000452776 FLNCQ14315 2725 aa5.07□□□□□ -1.6
SMCO1-202ENST00000452776 PRLHP81277 87 aa5.07□□□□□ -1.6
SMCO1-202ENST00000452776 KRTAP21-3Q3LHN1 58 aa5.07□□□□□ -1.6
SMCO1-202ENST00000452776 DNHD1Q96M86 4753 aa5.07□□□□□ -1.6
SMCO1-202ENST00000452776 KRTAP25-1Q3LHN0 102 aa5.07□□□□□ -1.6
SMCO1-202ENST00000452776 Q96NJ1 140 aa5.07□□□□□ -1.6
SMCO1-202ENST00000452776 DEFB113Q30KQ7 82 aa5.06□□□□□ -1.6
SMCO1-202ENST00000452776 NBPF19A0A087WUL8 3843 aa5.05□□□□□ -1.6
SMCO1-202ENST00000452776 ITPR2Q14571 2701 aa5.05□□□□□ -1.6
SMCO1-202ENST00000452776 LRRK2Q5S007 2527 aa5.04□□□□□ -1.6
SMCO1-202ENST00000452776 IGLV7-43P04211 117 aa5.04□□□□□ -1.6
SMCO1-202ENST00000452776 UTP20O75691 2785 aaKnown RBP5.04□□□□□ -1.6
SMCO1-202ENST00000452776 NF1P21359 2839 aa5.04□□□□□ -1.6
SMCO1-202ENST00000452776 USP9YO00507 2555 aaPredicted RBP5.03□□□□□ -1.6
SMCO1-202ENST00000452776 KRTAP13-3Q3SY46 172 aa5.02□□□□□ -1.61
SMCO1-202ENST00000452776 TLN2Q9Y4G6 2542 aa5.02□□□□□ -1.61
SMCO1-202ENST00000452776 HIVEP3Q5T1R4 2406 aa5.01□□□□□ -1.61
SMCO1-202ENST00000452776 ALMS1Q8TCU4 4167 aa5□□□□□ -1.61
SMCO1-202ENST00000452776 CRYBG3Q68DQ2 2970 aa5□□□□□ -1.61
SMCO1-202ENST00000452776 NBASA2RRP1 2371 aa5□□□□□ -1.61
SMCO1-202ENST00000452776 CENPEQ02224 2701 aa4.98□□□□□ -1.61
SMCO1-202ENST00000452776 C14orf177Q52M58 125 aa4.98□□□□□ -1.61
SMCO1-202ENST00000452776 KRTAP9-7A8MTY7 169 aa4.97□□□□□ -1.61
SMCO1-202ENST00000452776 INAFM1C9JVW0 142 aa4.97□□□□□ -1.61
SMCO1-202ENST00000452776 LINC00483Q53H64 154 aa4.97□□□□□ -1.61
SMCO1-202ENST00000452776 Q5W150 140 aa4.97□□□□□ -1.61
SMCO1-202ENST00000452776 A0A096LNI7 61 aa4.96□□□□□ -1.62
SMCO1-202ENST00000452776 AKAP9Q99996 3911 aa4.96□□□□□ -1.62
SMCO1-202ENST00000452776 A8MUU9 505 aa4.95□□□□□ -1.62
SMCO1-202ENST00000452776 OTOGQ6ZRI0 2925 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms