RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 NOTCH2Q04721 2471 aa5.52□□□□□ -1.53
LSM5-208ENST00000450169 LELP1Q5T871 98 aa5.52□□□□□ -1.53
LSM5-208ENST00000450169 LINC01558Q9Y6Z2 57 aa5.52□□□□□ -1.53
LSM5-208ENST00000450169 KRTAP29-1A8MX34 341 aaPredicted RBP5.51□□□□□ -1.53
LSM5-208ENST00000450169 IGLV1-51P01701 117 aa5.51□□□□□ -1.53
LSM5-208ENST00000450169 LINC00476Q8WZB0 136 aa5.51□□□□□ -1.53
LSM5-208ENST00000450169 SPAG11AQ6PDA7 123 aa5.51□□□□□ -1.53
LSM5-208ENST00000450169 PLAC8Q9NZF1 115 aa5.51□□□□□ -1.53
LSM5-208ENST00000450169 LINC00313P59037 77 aa5.5□□□□□ -1.53
LSM5-208ENST00000450169 FN1P02751 2386 aaKnown RBP5.5□□□□□ -1.53
LSM5-208ENST00000450169 IGLV7-46A0A075B6I9 117 aa5.5□□□□□ -1.53
LSM5-208ENST00000450169 SPINK7P58062 85 aa5.5□□□□□ -1.53
LSM5-208ENST00000450169 CASC2Q6XLA1 102 aa5.49□□□□□ -1.53
LSM5-208ENST00000450169 OTOGQ6ZRI0 2925 aa5.49□□□□□ -1.53
LSM5-208ENST00000450169 J3QKU1 62 aa5.49□□□□□ -1.53
LSM5-208ENST00000450169 NBEAL2Q6ZNJ1 2754 aa5.48□□□□□ -1.53
LSM5-208ENST00000450169 KRTAP4-16G5E9R7 235 aaPredicted RBP5.48□□□□□ -1.53
LSM5-208ENST00000450169 DEFB4AO15263 64 aa5.48□□□□□ -1.53
LSM5-208ENST00000450169 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
LSM5-208ENST00000450169 RPL37AP8A6NKH3 93 aa5.47□□□□□ -1.53
LSM5-208ENST00000450169 RPL37AP61513 92 aaKnown RBP5.47□□□□□ -1.53
LSM5-208ENST00000450169 C15orf56Q8N910 161 aa5.47□□□□□ -1.53
LSM5-208ENST00000450169 A0A0G2JQZ4 141 aa5.46□□□□□ -1.53
LSM5-208ENST00000450169 A0A1W2PNN7 141 aa5.46□□□□□ -1.53
LSM5-208ENST00000450169 KRTAP1-1Q07627 177 aa5.46□□□□□ -1.53
LSM5-208ENST00000450169 A0A087WSZ3 146 aa5.46□□□□□ -1.54
LSM5-208ENST00000450169 CNBPP62633 177 aaKnown RBP5.46□□□□□ -1.54
LSM5-208ENST00000450169 LINC01554Q52M75 96 aa5.46□□□□□ -1.54
LSM5-208ENST00000450169 IGFL1Q6UW32 110 aa5.45□□□□□ -1.54
LSM5-208ENST00000450169 SPRR1AP35321 89 aa5.45□□□□□ -1.54
LSM5-208ENST00000450169 HTN3P15516 51 aa5.44□□□□□ -1.54
LSM5-208ENST00000450169 KRTAP26-1Q6PEX3 210 aa5.44□□□□□ -1.54
LSM5-208ENST00000450169 IGLV1-50A0A075B6I6 118 aa5.44□□□□□ -1.54
LSM5-208ENST00000450169 HIVEP2P31629 2446 aa5.43□□□□□ -1.54
LSM5-208ENST00000450169 IGLV5-37A0A075B6J1 123 aa5.43□□□□□ -1.54
LSM5-208ENST00000450169 PCOTHQ58A44 107 aa5.43□□□□□ -1.54
LSM5-208ENST00000450169 NSD1Q96L73 2696 aaPredicted RBP5.43□□□□□ -1.54
LSM5-208ENST00000450169 ADM2Q7Z4H4 148 aa5.41□□□□□ -1.54
LSM5-208ENST00000450169 Q8NAQ8 132 aa5.41□□□□□ -1.54
LSM5-208ENST00000450169 A8MWP4 228 aa5.41□□□□□ -1.54
LSM5-208ENST00000450169 DEFB135Q30KP9 77 aa5.41□□□□□ -1.54
LSM5-208ENST00000450169 SMR3AQ99954 134 aa5.41□□□□□ -1.54
LSM5-208ENST00000450169 HIVEP1P15822 2718 aa5.4□□□□□ -1.54
LSM5-208ENST00000450169 VWFP04275 2813 aa5.4□□□□□ -1.55
LSM5-208ENST00000450169 FAM168BA1KXE4 195 aa5.4□□□□□ -1.55
LSM5-208ENST00000450169 HRES1P13985 223 aa5.39□□□□□ -1.55
LSM5-208ENST00000450169 TRRAPQ9Y4A5 3859 aa5.39□□□□□ -1.55
LSM5-208ENST00000450169 TENM1Q9UKZ4 2725 aa5.39□□□□□ -1.55
LSM5-208ENST00000450169 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
LSM5-208ENST00000450169 IGLV8-61A0A075B6I0 122 aa5.38□□□□□ -1.55
LSM5-208ENST00000450169 PRR26Q8N8Z3 221 aa5.37□□□□□ -1.55
LSM5-208ENST00000450169 FLNBO75369 2602 aaKnown RBP5.37□□□□□ -1.55
LSM5-208ENST00000450169 SPART-AS1P0CW21 52 aa5.37□□□□□ -1.55
LSM5-208ENST00000450169 ASB16-AS1Q495Z4 193 aa5.37□□□□□ -1.55
LSM5-208ENST00000450169 MMP24-AS1A0A0U1RRL7 71 aa5.36□□□□□ -1.55
LSM5-208ENST00000450169 TLX1NBP0CAT3 122 aa5.36□□□□□ -1.55
LSM5-208ENST00000450169 LINC00472Q9H8W2 130 aa5.36□□□□□ -1.55
LSM5-208ENST00000450169 H0Y9J4 135 aa5.35□□□□□ -1.55
LSM5-208ENST00000450169 SEC61BP60468 96 aaKnown RBP5.35□□□□□ -1.55
LSM5-208ENST00000450169 REG3GQ6UW15 175 aa5.35□□□□□ -1.55
LSM5-208ENST00000450169 KRTAP7-1Q8IUC3 87 aa5.35□□□□□ -1.55
LSM5-208ENST00000450169 TP53AIP1Q9HCN2 124 aa5.35□□□□□ -1.55
LSM5-208ENST00000450169 IGKV2-24A0A0C4DH68 120 aa5.34□□□□□ -1.55
LSM5-208ENST00000450169 RTL8CO15255 209 aa5.34□□□□□ -1.56
LSM5-208ENST00000450169 ATRQ13535 2644 aa5.33□□□□□ -1.56
LSM5-208ENST00000450169 Q6ZR54 194 aa5.33□□□□□ -1.56
LSM5-208ENST00000450169 A0A087X002 238 aa5.32□□□□□ -1.56
LSM5-208ENST00000450169 DEFB131BA0A096LNP1 70 aa5.31□□□□□ -1.56
LSM5-208ENST00000450169 PRLHP81277 87 aa5.31□□□□□ -1.56
LSM5-208ENST00000450169 F8P00451 2351 aa5.3□□□□□ -1.56
LSM5-208ENST00000450169 TEP1Q99973 2627 aaKnown RBP5.3□□□□□ -1.56
LSM5-208ENST00000450169 INAFM1C9JVW0 142 aa5.3□□□□□ -1.56
LSM5-208ENST00000450169 KRTAP10-3P60369 221 aa5.3□□□□□ -1.56
LSM5-208ENST00000450169 RETNLBQ9BQ08 111 aa5.29□□□□□ -1.56
LSM5-208ENST00000450169 ANK2Q01484 3957 aa5.29□□□□□ -1.56
LSM5-208ENST00000450169 H3BNG1 76 aa5.27□□□□□ -1.57
LSM5-208ENST00000450169 LINC01556Q5JQF7 62 aa5.27□□□□□ -1.57
LSM5-208ENST00000450169 CMYA5Q8N3K9 4069 aa5.27□□□□□ -1.57
LSM5-208ENST00000450169 CSAG1Q6PB30 78 aa5.26□□□□□ -1.57
LSM5-208ENST00000450169 SPATA8Q6RVD6 105 aa5.26□□□□□ -1.57
LSM5-208ENST00000450169 C8orf17Q9NRJ1 99 aa5.25□□□□□ -1.57
LSM5-208ENST00000450169 A0A1B0GU69 56 aa5.24□□□□□ -1.57
LSM5-208ENST00000450169 SPRR1BP22528 89 aa5.23□□□□□ -1.57
LSM5-208ENST00000450169 TENM2Q9NT68 2774 aa5.23□□□□□ -1.57
LSM5-208ENST00000450169 PKD1L1Q8TDX9 2849 aa5.23□□□□□ -1.57
LSM5-208ENST00000450169 STAB1Q9NY15 2570 aa5.23□□□□□ -1.57
LSM5-208ENST00000450169 A0A096LNI7 61 aa5.22□□□□□ -1.57
LSM5-208ENST00000450169 ACYP2P14621 99 aa5.22□□□□□ -1.57
LSM5-208ENST00000450169 MIR22HGQ0VDD5 57 aa5.22□□□□□ -1.57
LSM5-208ENST00000450169 CASC10Q5T4H9 136 aa5.22□□□□□ -1.57
LSM5-208ENST00000450169 Q96NJ1 140 aa5.22□□□□□ -1.57
LSM5-208ENST00000450169 FBN1P35555 2871 aaKnown RBP5.22□□□□□ -1.57
LSM5-208ENST00000450169 MAST4O15021 2626 aa5.2□□□□□ -1.58
LSM5-208ENST00000450169 BAHCC1Q9P281 2608 aa5.2□□□□□ -1.58
LSM5-208ENST00000450169 IGHV6-1A0A0B4J1U7 121 aa5.2□□□□□ -1.58
LSM5-208ENST00000450169 UQCR11O14957 56 aa5.2□□□□□ -1.58
LSM5-208ENST00000450169 MRPL34Q9BQ48 92 aaKnown RBP5.2□□□□□ -1.58
LSM5-208ENST00000450169 DNAH10OSP0CZ25 163 aa5.2□□□□□ -1.58
LSM5-208ENST00000450169 A0A1B0GVX0 72 aa5.19□□□□□ -1.58
LSM5-208ENST00000450169 IGLV5-52A0A0A0MRZ9 124 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms