RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 PSCAO43653 123 aa8.23□□□□□ -1.09
SHC1-210ENST00000448116 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.22□□□□□ -1.09
SHC1-210ENST00000448116 TNP2Q05952 138 aa8.22□□□□□ -1.09
SHC1-210ENST00000448116 K7EQZ3 153 aa8.21□□□□□ -1.1
SHC1-210ENST00000448116 LINC00476Q8WZB0 136 aa8.21□□□□□ -1.1
SHC1-210ENST00000448116 A0A096LNI7 61 aa8.2□□□□□ -1.1
SHC1-210ENST00000448116 DSCR10P59022 87 aa8.19□□□□□ -1.1
SHC1-210ENST00000448116 STAB2Q8WWQ8 2551 aa8.18□□□□□ -1.1
SHC1-210ENST00000448116 K7EIL1 84 aa8.17□□□□□ -1.1
SHC1-210ENST00000448116 SPRR4Q96PI1 79 aa8.17□□□□□ -1.1
SHC1-210ENST00000448116 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
SHC1-210ENST00000448116 KRTAP1-5Q9BYS1 174 aa8.16□□□□□ -1.1
SHC1-210ENST00000448116 ATP5EP56381 51 aaPredicted RBP8.16□□□□□ -1.1
SHC1-210ENST00000448116 A0A087WSZ3 146 aa8.16□□□□□ -1.1
SHC1-210ENST00000448116 A0A1B0GW54 56 aa8.16□□□□□ -1.1
SHC1-210ENST00000448116 CHTF8P0CG12 524 aa8.16□□□□□ -1.1
SHC1-210ENST00000448116 IGFL1Q6UW32 110 aa8.16□□□□□ -1.1
SHC1-210ENST00000448116 WFDC13Q8IUB5 93 aa8.16□□□□□ -1.1
SHC1-210ENST00000448116 A8MUN3 132 aa8.15□□□□□ -1.1
SHC1-210ENST00000448116 UBE2AP49459 152 aa8.13□□□□□ -1.11
SHC1-210ENST00000448116 PRR4Q16378 134 aa8.13□□□□□ -1.11
SHC1-210ENST00000448116 PHF5AQ7RTV0 110 aaKnown RBP8.13□□□□□ -1.11
SHC1-210ENST00000448116 C16orf90A8MZG2 172 aa8.12□□□□□ -1.11
SHC1-210ENST00000448116 RPL37AP61513 92 aaKnown RBP8.12□□□□□ -1.11
SHC1-210ENST00000448116 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
SHC1-210ENST00000448116 HCG22E2RYF7 251 aa8.11□□□□□ -1.11
SHC1-210ENST00000448116 TENM2Q9NT68 2774 aa8.1□□□□□ -1.11
SHC1-210ENST00000448116 TRAV22A0A0B4J277 110 aa8.09□□□□□ -1.11
SHC1-210ENST00000448116 KRTAP11-1Q8IUC1 163 aa8.09□□□□□ -1.11
SHC1-210ENST00000448116 CMYA5Q8N3K9 4069 aa8.06□□□□□ -1.12
SHC1-210ENST00000448116 PRAC1Q96KF2 57 aa8.06□□□□□ -1.12
SHC1-210ENST00000448116 CSMD3Q7Z407 3707 aa8.05□□□□□ -1.12
SHC1-210ENST00000448116 CHKB-CPT1BH3BT56 60 aa8.05□□□□□ -1.12
SHC1-210ENST00000448116 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
SHC1-210ENST00000448116 HUWE1Q7Z6Z7 4374 aaKnown RBP8.03□□□□□ -1.12
SHC1-210ENST00000448116 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
SHC1-210ENST00000448116 LINC00208Q96KT6 92 aa8.02□□□□□ -1.12
SHC1-210ENST00000448116 LCE6AA0A183 80 aa8.02□□□□□ -1.13
SHC1-210ENST00000448116 C1orf64Q8NEQ6 169 aa8.02□□□□□ -1.13
SHC1-210ENST00000448116 MP68P56378 58 aa8.01□□□□□ -1.13
SHC1-210ENST00000448116 C14orf177Q52M58 125 aa8.01□□□□□ -1.13
SHC1-210ENST00000448116 NDUFS5O43920 106 aa8.01□□□□□ -1.13
SHC1-210ENST00000448116 ZCCHC13Q8WW36 166 aaKnown RBP8□□□□□ -1.13
SHC1-210ENST00000448116 CASC2Q6XLA1 102 aa8□□□□□ -1.13
SHC1-210ENST00000448116 APLNQ9ULZ1 77 aa8□□□□□ -1.13
SHC1-210ENST00000448116 IGLV8-61A0A075B6I0 122 aa7.99□□□□□ -1.13
SHC1-210ENST00000448116 H0Y9J4 135 aa7.99□□□□□ -1.13
SHC1-210ENST00000448116 B9D2Q9BPU9 175 aa7.99□□□□□ -1.13
SHC1-210ENST00000448116 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
SHC1-210ENST00000448116 LCA10Q71F78 164 aa7.99□□□□□ -1.13
SHC1-210ENST00000448116 PANO1I0J062 215 aa7.98□□□□□ -1.13
SHC1-210ENST00000448116 DNAH1Q9P2D7 4330 aa7.98□□□□□ -1.13
SHC1-210ENST00000448116 Q1T7F1 81 aa7.97□□□□□ -1.13
SHC1-210ENST00000448116 C9orf163Q8N9P6 203 aa7.97□□□□□ -1.13
SHC1-210ENST00000448116 LYSTQ99698 3801 aa7.97□□□□□ -1.13
SHC1-210ENST00000448116 IGLV9-49A0A0B4J1Y8 123 aa7.97□□□□□ -1.13
SHC1-210ENST00000448116 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
SHC1-210ENST00000448116 DNAH3Q8TD57 4116 aa7.97□□□□□ -1.13
SHC1-210ENST00000448116 COL7A1Q02388 2944 aa7.97□□□□□ -1.13
SHC1-210ENST00000448116 C7orf65Q6ZTY9 151 aa7.97□□□□□ -1.13
SHC1-210ENST00000448116 LINC00313P59037 77 aa7.96□□□□□ -1.14
SHC1-210ENST00000448116 H0Y9P7 68 aa7.95□□□□□ -1.14
SHC1-210ENST00000448116 A0A0A0MQY5 61 aa7.95□□□□□ -1.14
SHC1-210ENST00000448116 A6NN06 94 aa7.94□□□□□ -1.14
SHC1-210ENST00000448116 Q5VV11 94 aa7.94□□□□□ -1.14
SHC1-210ENST00000448116 A8MWP4 228 aa7.93□□□□□ -1.14
SHC1-210ENST00000448116 NBDYA0A0U1RRE5 68 aa7.93□□□□□ -1.14
SHC1-210ENST00000448116 KRTAP29-1A8MX34 341 aaPredicted RBP7.93□□□□□ -1.14
SHC1-210ENST00000448116 NDUFB1O75438 58 aa7.93□□□□□ -1.14
SHC1-210ENST00000448116 A6NED7 52 aa7.93□□□□□ -1.14
SHC1-210ENST00000448116 ADM2Q7Z4H4 148 aa7.93□□□□□ -1.14
SHC1-210ENST00000448116 SPRR1BP22528 89 aa7.92□□□□□ -1.14
SHC1-210ENST00000448116 LINC00472Q9H8W2 130 aa7.92□□□□□ -1.14
SHC1-210ENST00000448116 DNAH9Q9NYC9 4486 aa7.91□□□□□ -1.14
SHC1-210ENST00000448116 PRR15LQ9BU68 103 aa7.9□□□□□ -1.14
SHC1-210ENST00000448116 LINC01554Q52M75 96 aa7.9□□□□□ -1.14
SHC1-210ENST00000448116 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
SHC1-210ENST00000448116 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
SHC1-210ENST00000448116 CYP4F30PQ9H0H9 118 aa7.87□□□□□ -1.15
SHC1-210ENST00000448116 ANAPC11Q9NYG5 84 aa7.87□□□□□ -1.15
SHC1-210ENST00000448116 MMP24-AS1A0A0U1RRL7 71 aa7.84□□□□□ -1.15
SHC1-210ENST00000448116 DNHD1Q96M86 4753 aa7.84□□□□□ -1.15
SHC1-210ENST00000448116 PCOTHQ58A44 107 aa7.84□□□□□ -1.15
SHC1-210ENST00000448116 Q6ZRN7 208 aaPredicted RBP7.83□□□□□ -1.16
SHC1-210ENST00000448116 IGHV6-1A0A0B4J1U7 121 aa7.83□□□□□ -1.16
SHC1-210ENST00000448116 KRTAP13-1Q8IUC0 172 aa7.83□□□□□ -1.16
SHC1-210ENST00000448116 MOBPQ13875 183 aa7.82□□□□□ -1.16
SHC1-210ENST00000448116 NUPR2A6NF83 97 aa7.82□□□□□ -1.16
SHC1-210ENST00000448116 SPACA4Q8TDM5 124 aa7.82□□□□□ -1.16
SHC1-210ENST00000448116 H3BPC8 53 aa7.8□□□□□ -1.16
SHC1-210ENST00000448116 CDK2AP2O75956 126 aa7.8□□□□□ -1.16
SHC1-210ENST00000448116 PSORS1C2Q9UIG4 136 aa7.79□□□□□ -1.16
SHC1-210ENST00000448116 A0A087WTM6 91 aa7.79□□□□□ -1.16
SHC1-210ENST00000448116 DNAH7Q8WXX0 4024 aa7.79□□□□□ -1.16
SHC1-210ENST00000448116 RTL8CO15255 209 aa7.77□□□□□ -1.16
SHC1-210ENST00000448116 SPINK6Q6UWN8 80 aa7.77□□□□□ -1.16
SHC1-210ENST00000448116 Q96NJ1 140 aa7.77□□□□□ -1.16
SHC1-210ENST00000448116 C8orf17Q9NRJ1 99 aa7.77□□□□□ -1.16
SHC1-210ENST00000448116 PLECQ15149 4684 aaKnown RBP7.77□□□□□ -1.17
SHC1-210ENST00000448116 SPANXA2-OT1Q8N9U9 137 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 189.6 ms