RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ANAPC11Q9NYG5 84 aa11.7□□□□□ -0.54
SGCE-207ENST00000447873 PRO0461Q9UI25 63 aa11.7□□□□□ -0.54
SGCE-207ENST00000447873 C3orf22Q8N5N4 141 aa11.69□□□□□ -0.54
SGCE-207ENST00000447873 ANKRD29Q8N6D5 301 aa11.69□□□□□ -0.54
SGCE-207ENST00000447873 F8W1H4 67 aa11.68□□□□□ -0.54
SGCE-207ENST00000447873 LAMTOR3Q9UHA4 124 aa11.67□□□□□ -0.54
SGCE-207ENST00000447873 SMIM29Q86T20 159 aa11.67□□□□□ -0.54
SGCE-207ENST00000447873 KRTAP1-4P0C5Y4 121 aa11.66□□□□□ -0.54
SGCE-207ENST00000447873 SMCPP49901 116 aaPredicted RBP11.66□□□□□ -0.54
SGCE-207ENST00000447873 NDUFV3P56181 108 aaKnown RBP11.66□□□□□ -0.54
SGCE-207ENST00000447873 FAM229BQ4G0N7 80 aa11.64□□□□□ -0.55
SGCE-207ENST00000447873 F8WEM9 126 aa11.63□□□□□ -0.55
SGCE-207ENST00000447873 LINC01600Q96MT4 127 aa11.62□□□□□ -0.55
SGCE-207ENST00000447873 IGLV9-49A0A0B4J1Y8 123 aa11.61□□□□□ -0.55
SGCE-207ENST00000447873 A0A1B0GV72 72 aa11.6□□□□□ -0.55
SGCE-207ENST00000447873 CRYGAP11844 174 aa11.6□□□□□ -0.55
SGCE-207ENST00000447873 A0A087X002 238 aa11.59□□□□□ -0.55
SGCE-207ENST00000447873 KRTAP4-5Q9BYR2 181 aa11.59□□□□□ -0.55
SGCE-207ENST00000447873 HERC2O95714 4834 aa11.59□□□□□ -0.55
SGCE-207ENST00000447873 C9orf153Q5TBE3 101 aa11.58□□□□□ -0.55
SGCE-207ENST00000447873 JMJD7-PLA2G4BH0Y9G9 81 aa11.57□□□□□ -0.56
SGCE-207ENST00000447873 RBM3P98179 157 aaKnown RBP11.56□□□□□ -0.56
SGCE-207ENST00000447873 MOBPQ13875 183 aa11.56□□□□□ -0.56
SGCE-207ENST00000447873 ETDBQ3ZM63 59 aa11.54□□□□□ -0.56
SGCE-207ENST00000447873 KRTAP13-2Q52LG2 175 aa11.54□□□□□ -0.56
SGCE-207ENST00000447873 TEN1Q86WV5 123 aa11.54□□□□□ -0.56
SGCE-207ENST00000447873 PRR26Q8N8Z3 221 aa11.54□□□□□ -0.56
SGCE-207ENST00000447873 Q8NBF4 154 aa11.54□□□□□ -0.56
SGCE-207ENST00000447873 IGLV8-61A0A075B6I0 122 aa11.53□□□□□ -0.56
SGCE-207ENST00000447873 OBSCN-AS1Q96MR7 158 aa11.53□□□□□ -0.56
SGCE-207ENST00000447873 FLG2Q5D862 2391 aaPredicted RBP11.52□□□□□ -0.57
SGCE-207ENST00000447873 DSCR8Q96T75 97 aa11.51□□□□□ -0.57
SGCE-207ENST00000447873 Q6JHZ5 121 aa11.5□□□□□ -0.57
SGCE-207ENST00000447873 TYMSOSQ8TAI1 123 aa11.5□□□□□ -0.57
SGCE-207ENST00000447873 SSBP3-AS1Q7Z2R9 100 aa11.5□□□□□ -0.57
SGCE-207ENST00000447873 C14orf132Q9NPU4 83 aa11.5□□□□□ -0.57
SGCE-207ENST00000447873 IGFL1Q6UW32 110 aa11.48□□□□□ -0.57
SGCE-207ENST00000447873 A0A0G2JQZ4 141 aa11.47□□□□□ -0.57
SGCE-207ENST00000447873 TRBV7-4A0A0J9YYF1 115 aa11.47□□□□□ -0.57
SGCE-207ENST00000447873 LRP1Q07954 4544 aaKnown RBP11.46□□□□□ -0.58
SGCE-207ENST00000447873 FAT3Q8TDW7 4589 aa11.44□□□□□ -0.58
SGCE-207ENST00000447873 LOC110117498A0A087WWA1 95 aa11.44□□□□□ -0.58
SGCE-207ENST00000447873 PDE6GP18545 87 aa11.44□□□□□ -0.58
SGCE-207ENST00000447873 ABCA13Q86UQ4 5058 aa11.43□□□□□ -0.58
SGCE-207ENST00000447873 MYCBP2O75592 4640 aa11.42□□□□□ -0.58
SGCE-207ENST00000447873 Q6ZQT0 140 aa11.41□□□□□ -0.58
SGCE-207ENST00000447873 CCKP06307 115 aa11.41□□□□□ -0.58
SGCE-207ENST00000447873 VPS25Q9BRG1 176 aa11.41□□□□□ -0.58
SGCE-207ENST00000447873 KRTAP3-3Q9BYR6 98 aa11.41□□□□□ -0.58
SGCE-207ENST00000447873 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
SGCE-207ENST00000447873 OXTP01178 125 aa11.4□□□□□ -0.58
SGCE-207ENST00000447873 KRTAP10-8P60410 259 aa11.4□□□□□ -0.58
SGCE-207ENST00000447873 HRCT1Q6UXD1 115 aa11.39□□□□□ -0.59
SGCE-207ENST00000447873 A0A1W2PNM2 257 aa11.38□□□□□ -0.59
SGCE-207ENST00000447873 C21orf62-AS1Q17RA5 79 aa11.37□□□□□ -0.59
SGCE-207ENST00000447873 C4orf48Q5BLP8 95 aa11.37□□□□□ -0.59
SGCE-207ENST00000447873 LINC00304Q8N9R0 145 aa11.37□□□□□ -0.59
SGCE-207ENST00000447873 TNXBP22105 4242 aa11.36□□□□□ -0.59
SGCE-207ENST00000447873 Q6Q795 121 aa11.35□□□□□ -0.59
SGCE-207ENST00000447873 CD164Q04900 197 aa11.34□□□□□ -0.59
SGCE-207ENST00000447873 KRTAP29-1A8MX34 341 aaPredicted RBP11.33□□□□□ -0.6
SGCE-207ENST00000447873 MT1HL1P0DM35 61 aa11.32□□□□□ -0.6
SGCE-207ENST00000447873 SPAG11AQ6PDA7 123 aa11.32□□□□□ -0.6
SGCE-207ENST00000447873 TRBV7-7A0A0K0K1E9 115 aa11.31□□□□□ -0.6
SGCE-207ENST00000447873 SPINK1P00995 79 aa11.29□□□□□ -0.6
SGCE-207ENST00000447873 A0A087WSZ3 146 aa11.28□□□□□ -0.6
SGCE-207ENST00000447873 A0A1B0GW54 56 aa11.28□□□□□ -0.6
SGCE-207ENST00000447873 J3QR89 54 aa11.26□□□□□ -0.61
SGCE-207ENST00000447873 J3QL48 77 aa11.24□□□□□ -0.61
SGCE-207ENST00000447873 LIMD2Q9BT23 127 aa11.23□□□□□ -0.61
SGCE-207ENST00000447873 RPS29P62273 56 aaKnown RBP11.22□□□□□ -0.61
SGCE-207ENST00000447873 SS18L2Q9UHA2 77 aa11.22□□□□□ -0.61
SGCE-207ENST00000447873 DMBT1Q9UGM3 2413 aaPredicted RBP11.22□□□□□ -0.61
SGCE-207ENST00000447873 PCLOQ9Y6V0 5065 aa11.21□□□□□ -0.61
SGCE-207ENST00000447873 ACYP1P07311 99 aa11.2□□□□□ -0.62
SGCE-207ENST00000447873 FAM240AA0A1B0GVK7 77 aa11.2□□□□□ -0.62
SGCE-207ENST00000447873 Q5XG85 94 aa11.19□□□□□ -0.62
SGCE-207ENST00000447873 LINC00846Q9NV44 126 aa11.19□□□□□ -0.62
SGCE-207ENST00000447873 K7ERU9 68 aa11.18□□□□□ -0.62
SGCE-207ENST00000447873 NREPQ16612 68 aa11.16□□□□□ -0.62
SGCE-207ENST00000447873 ASB16-AS1Q495Z4 193 aa11.14□□□□□ -0.63
SGCE-207ENST00000447873 UBL5Q9BZL1 73 aa11.14□□□□□ -0.63
SGCE-207ENST00000447873 Q6ZVQ6 151 aa11.12□□□□□ -0.63
SGCE-207ENST00000447873 LINC00472Q9H8W2 130 aa11.08□□□□□ -0.64
SGCE-207ENST00000447873 DEFB116Q30KQ4 102 aa11.07□□□□□ -0.64
SGCE-207ENST00000447873 C1orf195Q5TG92 126 aa11.07□□□□□ -0.64
SGCE-207ENST00000447873 Q96NJ1 140 aa11.07□□□□□ -0.64
SGCE-207ENST00000447873 RETNLBQ9BQ08 111 aa11.06□□□□□ -0.64
SGCE-207ENST00000447873 BPY2O14599 106 aa11.03□□□□□ -0.64
SGCE-207ENST00000447873 IGKV4-1P06312 121 aa11.03□□□□□ -0.64
SGCE-207ENST00000447873 SIGMAR1Q99720 223 aa11.02□□□□□ -0.65
SGCE-207ENST00000447873 J3KT08 172 aa11.01□□□□□ -0.65
SGCE-207ENST00000447873 CDIP1Q9H305 208 aa10.99□□□□□ -0.65
SGCE-207ENST00000447873 LINC00643Q86TS7 51 aa10.98□□□□□ -0.65
SGCE-207ENST00000447873 CXCL6P80162 114 aa10.94□□□□□ -0.66
SGCE-207ENST00000447873 FP248Q71RG6 208 aaPredicted RBP10.94□□□□□ -0.66
SGCE-207ENST00000447873 DSCR10P59022 87 aa10.94□□□□□ -0.66
SGCE-207ENST00000447873 ATP5EP2Q5VTU8 51 aa10.94□□□□□ -0.66
SGCE-207ENST00000447873 IGKV3D-7A0A0C4DH55 119 aa10.93□□□□□ -0.66
SGCE-207ENST00000447873 NDUFB1O75438 58 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms