RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 KMT2AQ03164 3969 aa12.07□□□□□ -0.48
FAM3A-215ENST00000447601 UQCRQO14949 82 aa12.07□□□□□ -0.48
FAM3A-215ENST00000447601 SCXQ7RTU7 201 aa12.06□□□□□ -0.48
FAM3A-215ENST00000447601 PLAC8Q9NZF1 115 aa12.06□□□□□ -0.48
FAM3A-215ENST00000447601 COX7CP15954 63 aa12.05□□□□□ -0.48
FAM3A-215ENST00000447601 DNAH2Q9P225 4427 aa12.04□□□□□ -0.48
FAM3A-215ENST00000447601 CRYGAP11844 174 aa12.04□□□□□ -0.48
FAM3A-215ENST00000447601 IGFL1Q6UW32 110 aa12.04□□□□□ -0.48
FAM3A-215ENST00000447601 BPY2O14599 106 aa12.03□□□□□ -0.48
FAM3A-215ENST00000447601 SERP2Q8N6R1 65 aa12.02□□□□□ -0.48
FAM3A-215ENST00000447601 C9orf153Q5TBE3 101 aa11.98□□□□□ -0.49
FAM3A-215ENST00000447601 HECTD4Q9Y4D8 3996 aa11.98□□□□□ -0.49
FAM3A-215ENST00000447601 DNAH17Q9UFH2 4485 aa11.97□□□□□ -0.49
FAM3A-215ENST00000447601 PSORS1C2Q9UIG4 136 aa11.97□□□□□ -0.49
FAM3A-215ENST00000447601 DNAH6Q9C0G6 4158 aa11.97□□□□□ -0.49
FAM3A-215ENST00000447601 A0A0G2JQZ4 141 aa11.95□□□□□ -0.5
FAM3A-215ENST00000447601 IGKV4-1P06312 121 aa11.95□□□□□ -0.5
FAM3A-215ENST00000447601 SMIM20Q8N5G0 67 aa11.93□□□□□ -0.5
FAM3A-215ENST00000447601 Q8N9L7 120 aa11.93□□□□□ -0.5
FAM3A-215ENST00000447601 ZNF706Q9Y5V0 76 aaPredicted RBP11.93□□□□□ -0.5
FAM3A-215ENST00000447601 ALMS1Q8TCU4 4167 aa11.92□□□□□ -0.5
FAM3A-215ENST00000447601 TGP01266 2768 aa11.89□□□□□ -0.51
FAM3A-215ENST00000447601 A0A087WSZ3 146 aa11.89□□□□□ -0.51
FAM3A-215ENST00000447601 KRTAP10-2P60368 255 aa11.89□□□□□ -0.51
FAM3A-215ENST00000447601 LINC00483Q53H64 154 aa11.89□□□□□ -0.51
FAM3A-215ENST00000447601 TRAV7A0A075B6U4 112 aa11.88□□□□□ -0.51
FAM3A-215ENST00000447601 ZNF861PO60384 105 aa11.88□□□□□ -0.51
FAM3A-215ENST00000447601 DSCR10P59022 87 aa11.84□□□□□ -0.51
FAM3A-215ENST00000447601 SS18L2Q9UHA2 77 aa11.84□□□□□ -0.51
FAM3A-215ENST00000447601 RPL37AP61513 92 aaKnown RBP11.83□□□□□ -0.52
FAM3A-215ENST00000447601 IGLV9-49A0A0B4J1Y8 123 aa11.81□□□□□ -0.52
FAM3A-215ENST00000447601 CIRBP-AS1Q8TBR5 109 aa11.81□□□□□ -0.52
FAM3A-215ENST00000447601 IGLV7-43P04211 117 aa11.81□□□□□ -0.52
FAM3A-215ENST00000447601 FAM30AQ9NZY2 134 aa11.81□□□□□ -0.52
FAM3A-215ENST00000447601 K7EQZ3 153 aa11.79□□□□□ -0.52
FAM3A-215ENST00000447601 Q6ZSA8 131 aa11.79□□□□□ -0.52
FAM3A-215ENST00000447601 SRRM2Q9UQ35 2752 aaKnown RBP11.78□□□□□ -0.52
FAM3A-215ENST00000447601 DNAH8Q96JB1 4490 aa11.77□□□□□ -0.53
FAM3A-215ENST00000447601 FRAS1Q86XX4 4008 aa11.76□□□□□ -0.53
FAM3A-215ENST00000447601 C20orf197Q8N268 126 aa11.76□□□□□ -0.53
FAM3A-215ENST00000447601 KRTAP10-1P60331 282 aa11.75□□□□□ -0.53
FAM3A-215ENST00000447601 DEFB116Q30KQ4 102 aa11.74□□□□□ -0.53
FAM3A-215ENST00000447601 CYSTM1Q9H1C7 97 aa11.74□□□□□ -0.53
FAM3A-215ENST00000447601 DNAH11Q96DT5 4516 aa11.74□□□□□ -0.53
FAM3A-215ENST00000447601 DNAH5Q8TE73 4624 aa11.73□□□□□ -0.53
FAM3A-215ENST00000447601 MOBPQ13875 183 aa11.72□□□□□ -0.53
FAM3A-215ENST00000447601 LINC00472Q9H8W2 130 aa11.72□□□□□ -0.53
FAM3A-215ENST00000447601 OCR1Q9BZK8 76 aa11.72□□□□□ -0.53
FAM3A-215ENST00000447601 HYDINQ4G0P3 5121 aa11.71□□□□□ -0.54
FAM3A-215ENST00000447601 HCG22E2RYF7 251 aa11.7□□□□□ -0.54
FAM3A-215ENST00000447601 ANAPC11Q9NYG5 84 aa11.7□□□□□ -0.54
FAM3A-215ENST00000447601 J3KT08 172 aa11.68□□□□□ -0.54
FAM3A-215ENST00000447601 TMEM258P61165 79 aa11.68□□□□□ -0.54
FAM3A-215ENST00000447601 KLKP1Q107X0 134 aa11.68□□□□□ -0.54
FAM3A-215ENST00000447601 FAT2Q9NYQ8 4349 aa11.67□□□□□ -0.54
FAM3A-215ENST00000447601 A8MWP4 228 aa11.66□□□□□ -0.54
FAM3A-215ENST00000447601 HRCT1Q6UXD1 115 aa11.64□□□□□ -0.55
FAM3A-215ENST00000447601 PRR15Q8IV56 129 aa11.64□□□□□ -0.55
FAM3A-215ENST00000447601 TMEM254Q8TBM7 123 aa11.62□□□□□ -0.55
FAM3A-215ENST00000447601 PKD1P98161 4303 aa11.62□□□□□ -0.55
FAM3A-215ENST00000447601 LCE6AA0A183 80 aa11.61□□□□□ -0.55
FAM3A-215ENST00000447601 SNURFQ9Y675 71 aa11.61□□□□□ -0.55
FAM3A-215ENST00000447601 LINC00336Q6ZUF6 198 aa11.6□□□□□ -0.55
FAM3A-215ENST00000447601 NDUFB1O75438 58 aa11.58□□□□□ -0.56
FAM3A-215ENST00000447601 WFDC13Q8IUB5 93 aa11.58□□□□□ -0.56
FAM3A-215ENST00000447601 Q96NJ1 140 aa11.58□□□□□ -0.56
FAM3A-215ENST00000447601 NDUFC1O43677 76 aa11.58□□□□□ -0.56
FAM3A-215ENST00000447601 H7BZZ5 65 aa11.57□□□□□ -0.56
FAM3A-215ENST00000447601 SSBP3-AS1Q7Z2R9 100 aa11.57□□□□□ -0.56
FAM3A-215ENST00000447601 KRTAP29-1A8MX34 341 aaPredicted RBP11.56□□□□□ -0.56
FAM3A-215ENST00000447601 CASC2Q6XLA1 102 aa11.55□□□□□ -0.56
FAM3A-215ENST00000447601 A0A0U1RQV1 116 aa11.54□□□□□ -0.56
FAM3A-215ENST00000447601 CD164Q04900 197 aa11.54□□□□□ -0.56
FAM3A-215ENST00000447601 SACSQ9NZJ4 4579 aa11.52□□□□□ -0.57
FAM3A-215ENST00000447601 FAM229BQ4G0N7 80 aa11.51□□□□□ -0.57
FAM3A-215ENST00000447601 C5orf47Q569G3 176 aa11.49□□□□□ -0.57
FAM3A-215ENST00000447601 MMP24-AS1A0A0U1RRL7 71 aa11.49□□□□□ -0.57
FAM3A-215ENST00000447601 FAM236DA0A1B0GTK5 79 aa11.49□□□□□ -0.57
FAM3A-215ENST00000447601 FAM236CP0DP71 79 aa11.49□□□□□ -0.57
FAM3A-215ENST00000447601 LRP1BQ9NZR2 4599 aa11.49□□□□□ -0.57
FAM3A-215ENST00000447601 CDK2AP2O75956 126 aa11.48□□□□□ -0.57
FAM3A-215ENST00000447601 A0A087X002 238 aa11.46□□□□□ -0.58
FAM3A-215ENST00000447601 RPS28P62857 69 aaKnown RBP11.46□□□□□ -0.58
FAM3A-215ENST00000447601 A0A1B0GVX0 72 aa11.44□□□□□ -0.58
FAM3A-215ENST00000447601 hDV103S1A0JD37 113 aa11.44□□□□□ -0.58
FAM3A-215ENST00000447601 KRTAP13-2Q52LG2 175 aa11.44□□□□□ -0.58
FAM3A-215ENST00000447601 A0A1B0GVY2 172 aa11.42□□□□□ -0.58
FAM3A-215ENST00000447601 C8orf17Q9NRJ1 99 aa11.42□□□□□ -0.58
FAM3A-215ENST00000447601 KRTAP1-4P0C5Y4 121 aa11.42□□□□□ -0.58
FAM3A-215ENST00000447601 IGHV6-1A0A0B4J1U7 121 aa11.41□□□□□ -0.58
FAM3A-215ENST00000447601 ASB16-AS1Q495Z4 193 aa11.41□□□□□ -0.58
FAM3A-215ENST00000447601 ATP5EP56381 51 aaPredicted RBP11.4□□□□□ -0.58
FAM3A-215ENST00000447601 MP68P56378 58 aa11.39□□□□□ -0.59
FAM3A-215ENST00000447601 ZCCHC13Q8WW36 166 aaKnown RBP11.39□□□□□ -0.59
FAM3A-215ENST00000447601 SPINK6Q6UWN8 80 aa11.36□□□□□ -0.59
FAM3A-215ENST00000447601 Q5XG85 94 aa11.35□□□□□ -0.59
FAM3A-215ENST00000447601 H3BPC8 53 aa11.34□□□□□ -0.59
FAM3A-215ENST00000447601 PLA2G1BP04054 148 aaKnown RBP11.34□□□□□ -0.59
FAM3A-215ENST00000447601 H0Y9P7 68 aa11.32□□□□□ -0.6
FAM3A-215ENST00000447601 TP53AIP1Q9HCN2 124 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms