RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 ESRGQ1W209 222 aa3.84□□□□□ -1.79
PTPN3-205ENST00000447271 UPK3BQ9BT76 320 aa3.84□□□□□ -1.79
PTPN3-205ENST00000447271 LINC00474Q9P2X8 69 aa3.84□□□□□ -1.79
PTPN3-205ENST00000447271 LOC107984640A0A0U1RRK4 108 aa3.83□□□□□ -1.8
PTPN3-205ENST00000447271 NCR3O14931 201 aa3.83□□□□□ -1.8
PTPN3-205ENST00000447271 PSCAO43653 123 aa3.83□□□□□ -1.8
PTPN3-205ENST00000447271 FUSP35637 526 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPN3-205ENST00000447271 CXCL6P80162 114 aa3.83□□□□□ -1.8
PTPN3-205ENST00000447271 C1orf134Q5TEV5 83 aa3.83□□□□□ -1.8
PTPN3-205ENST00000447271 FAM218AQ96MZ4 157 aa3.83□□□□□ -1.8
PTPN3-205ENST00000447271 C14orf132Q9NPU4 83 aa3.83□□□□□ -1.8
PTPN3-205ENST00000447271 SYNE2Q8WXH0 6885 aaKnown RBP3.82□□□□□ -1.8
PTPN3-205ENST00000447271 ETDCA0A1B0GVM5 59 aa3.82□□□□□ -1.8
PTPN3-205ENST00000447271 RPL37AP8A6NKH3 93 aa3.82□□□□□ -1.8
PTPN3-205ENST00000447271 ELOF1P60002 83 aaKnown RBP3.82□□□□□ -1.8
PTPN3-205ENST00000447271 HIGD2BQ4VC39 106 aa3.82□□□□□ -1.8
PTPN3-205ENST00000447271 UBE2DNLQ8IWF7 75 aa3.82□□□□□ -1.8
PTPN3-205ENST00000447271 C6orf223Q8N319 242 aa3.82□□□□□ -1.8
PTPN3-205ENST00000447271 KCNQ1DNQ9H478 68 aa3.82□□□□□ -1.8
PTPN3-205ENST00000447271 C6orf48Q9UBA6 75 aa3.82□□□□□ -1.8
PTPN3-205ENST00000447271 F8WEM9 126 aa3.81□□□□□ -1.8
PTPN3-205ENST00000447271 PRYO14603 147 aa3.81□□□□□ -1.8
PTPN3-205ENST00000447271 NANOS2P60321 138 aaKnown RBP3.81□□□□□ -1.8
PTPN3-205ENST00000447271 HIST1H4AP62805 103 aaKnown RBP3.81□□□□□ -1.8
PTPN3-205ENST00000447271 C9orf116Q5BN46 136 aaPredicted RBP3.81□□□□□ -1.8
PTPN3-205ENST00000447271 Q6ZQY7 126 aa3.81□□□□□ -1.8
PTPN3-205ENST00000447271 WFDC10BQ8IUB3 73 aa3.81□□□□□ -1.8
PTPN3-205ENST00000447271 C3orf22Q8N5N4 141 aa3.81□□□□□ -1.8
PTPN3-205ENST00000447271 NEBP20929 6669 aa3.81□□□□□ -1.8
PTPN3-205ENST00000447271 FAM236AA0A1B0GUQ0 79 aa3.8□□□□□ -1.8
PTPN3-205ENST00000447271 FAM236BA0A1B0GV22 79 aa3.8□□□□□ -1.8
PTPN3-205ENST00000447271 NREPQ16612 68 aa3.8□□□□□ -1.8
PTPN3-205ENST00000447271 XAGE1AQ9HD64 81 aa3.8□□□□□ -1.8
PTPN3-205ENST00000447271 IGLV5-37A0A075B6J1 123 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 NDUFC1O43677 76 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 VPREB1P12018 145 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 COX7CP15954 63 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 PRR3P79522 188 aaKnown RBP3.79□□□□□ -1.8
PTPN3-205ENST00000447271 HAMPP81172 84 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 C10orf25Q5T742 122 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 C9orf153Q5TBE3 101 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 Q6ZRU5 148 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 SERP2Q8N6R1 65 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 LINC00526Q96FQ7 95 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 LINC00846Q9NV44 126 aa3.79□□□□□ -1.8
PTPN3-205ENST00000447271 LPAP08519 4548 aa3.78□□□□□ -1.8
PTPN3-205ENST00000447271 Q6ZQT0 140 aa3.78□□□□□ -1.8
PTPN3-205ENST00000447271 Q6ZR54 194 aa3.78□□□□□ -1.8
PTPN3-205ENST00000447271 APLNQ9ULZ1 77 aa3.78□□□□□ -1.8
PTPN3-205ENST00000447271 B5MCH6 92 aa3.77□□□□□ -1.81
PTPN3-205ENST00000447271 USP17L23D6RBM5 183 aa3.77□□□□□ -1.81
PTPN3-205ENST00000447271 C15orf56Q8N910 161 aa3.77□□□□□ -1.81
PTPN3-205ENST00000447271 LINC00588Q9Y4M8 146 aa3.77□□□□□ -1.81
PTPN3-205ENST00000447271 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
PTPN3-205ENST00000447271 IGLV1-50A0A075B6I6 118 aa3.76□□□□□ -1.81
PTPN3-205ENST00000447271 CRYGAP11844 174 aa3.76□□□□□ -1.81
PTPN3-205ENST00000447271 CNBPP62633 177 aaKnown RBP3.76□□□□□ -1.81
PTPN3-205ENST00000447271 KRTAP26-1Q6PEX3 210 aa3.76□□□□□ -1.81
PTPN3-205ENST00000447271 Q6ZRP5 223 aa3.76□□□□□ -1.81
PTPN3-205ENST00000447271 MRPL55Q7Z7F7 128 aaKnown RBP3.76□□□□□ -1.81
PTPN3-205ENST00000447271 DPH3Q96FX2 82 aa3.76□□□□□ -1.81
PTPN3-205ENST00000447271 IGKV3D-7A0A0C4DH55 119 aa3.75□□□□□ -1.81
PTPN3-205ENST00000447271 TRBV7-4A0A0J9YYF1 115 aa3.75□□□□□ -1.81
PTPN3-205ENST00000447271 BPY2O14599 106 aa3.75□□□□□ -1.81
PTPN3-205ENST00000447271 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
PTPN3-205ENST00000447271 REG3GQ6UW15 175 aa3.75□□□□□ -1.81
PTPN3-205ENST00000447271 Q6ZRX8 168 aa3.75□□□□□ -1.81
PTPN3-205ENST00000447271 IGLV5-48A0A075B6I7 105 aa3.74□□□□□ -1.81
PTPN3-205ENST00000447271 TRAV7A0A075B6U4 112 aa3.74□□□□□ -1.81
PTPN3-205ENST00000447271 H0Y9J4 135 aa3.74□□□□□ -1.81
PTPN3-205ENST00000447271 TMEM258P61165 79 aa3.74□□□□□ -1.81
PTPN3-205ENST00000447271 UBE2BP63146 152 aa3.74□□□□□ -1.81
PTPN3-205ENST00000447271 C22orf24Q9Y442 160 aa3.74□□□□□ -1.81
PTPN3-205ENST00000447271 ERC2-IT1O76042 136 aa3.73□□□□□ -1.81
PTPN3-205ENST00000447271 LINC01547P58512 204 aaPredicted RBP3.73□□□□□ -1.81
PTPN3-205ENST00000447271 Q6ZVQ6 151 aa3.73□□□□□ -1.81
PTPN3-205ENST00000447271 SMCR5Q8TEV8 140 aa3.73□□□□□ -1.81
PTPN3-205ENST00000447271 C7orf33Q8WU49 177 aa3.73□□□□□ -1.81
PTPN3-205ENST00000447271 GPR98Q8WXG9 6306 aa3.73□□□□□ -1.81
PTPN3-205ENST00000447271 SPRR1AP35321 89 aa3.72□□□□□ -1.81
PTPN3-205ENST00000447271 ATP5EP56381 51 aaPredicted RBP3.72□□□□□ -1.81
PTPN3-205ENST00000447271 RPL37AP61513 92 aaKnown RBP3.72□□□□□ -1.81
PTPN3-205ENST00000447271 DEFB105AQ8NG35 78 aa3.72□□□□□ -1.81
PTPN3-205ENST00000447271 MT1HL1P0DM35 61 aa3.71□□□□□ -1.82
PTPN3-205ENST00000447271 C1orf137Q5JT78 98 aa3.71□□□□□ -1.82
PTPN3-205ENST00000447271 C9orf129Q5T035 196 aaKnown RBP3.71□□□□□ -1.82
PTPN3-205ENST00000447271 ZNF706Q9Y5V0 76 aaPredicted RBP3.71□□□□□ -1.82
PTPN3-205ENST00000447271 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
PTPN3-205ENST00000447271 J3KT08 172 aa3.7□□□□□ -1.82
PTPN3-205ENST00000447271 NBDYA0A0U1RRE5 68 aa3.69□□□□□ -1.82
PTPN3-205ENST00000447271 NDUFB1O75438 58 aa3.69□□□□□ -1.82
PTPN3-205ENST00000447271 UBE2AP49459 152 aa3.69□□□□□ -1.82
PTPN3-205ENST00000447271 FAM19A1Q7Z5A9 133 aa3.69□□□□□ -1.82
PTPN3-205ENST00000447271 C9orf163Q8N9P6 203 aa3.69□□□□□ -1.82
PTPN3-205ENST00000447271 C5orf47Q569G3 176 aa3.68□□□□□ -1.82
PTPN3-205ENST00000447271 FAM19A5Q7Z5A7 132 aaPredicted RBP3.68□□□□□ -1.82
PTPN3-205ENST00000447271 Q8N377 158 aa3.68□□□□□ -1.82
PTPN3-205ENST00000447271 Q8NBF4 154 aa3.68□□□□□ -1.82
PTPN3-205ENST00000447271 SPRR4Q96PI1 79 aa3.68□□□□□ -1.82
PTPN3-205ENST00000447271 SS18L2Q9UHA2 77 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms