RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 LYRM7Q5U5X0 104 aa10.65□□□□□ -0.7
TRAPPC4-203ENST00000447216 C3orf22Q8N5N4 141 aa10.65□□□□□ -0.7
TRAPPC4-203ENST00000447216 DNAL4O96015 105 aa10.64□□□□□ -0.71
TRAPPC4-203ENST00000447216 TNXBP22105 4242 aa10.63□□□□□ -0.71
TRAPPC4-203ENST00000447216 OXTP01178 125 aa10.63□□□□□ -0.71
TRAPPC4-203ENST00000447216 TRACP01848 142 aa10.63□□□□□ -0.71
TRAPPC4-203ENST00000447216 FABP2P12104 132 aa10.63□□□□□ -0.71
TRAPPC4-203ENST00000447216 ATXN8Q156A1 80 aa10.63□□□□□ -0.71
TRAPPC4-203ENST00000447216 IGLV9-49A0A0B4J1Y8 123 aa10.62□□□□□ -0.71
TRAPPC4-203ENST00000447216 KRTAP29-1A8MX34 341 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC4-203ENST00000447216 SMIM29Q86T20 159 aa10.61□□□□□ -0.71
TRAPPC4-203ENST00000447216 MT1HL1P0DM35 61 aa10.6□□□□□ -0.71
TRAPPC4-203ENST00000447216 KRTAP10-8P60410 259 aa10.6□□□□□ -0.71
TRAPPC4-203ENST00000447216 TRBV20-1A0A075B6N2 111 aa10.59□□□□□ -0.71
TRAPPC4-203ENST00000447216 GHRHP01286 108 aa10.59□□□□□ -0.71
TRAPPC4-203ENST00000447216 OCIAD2Q56VL3 154 aa10.59□□□□□ -0.71
TRAPPC4-203ENST00000447216 ORMDL1Q9P0S3 153 aa10.59□□□□□ -0.71
TRAPPC4-203ENST00000447216 LAMTOR3Q9UHA4 124 aa10.59□□□□□ -0.71
TRAPPC4-203ENST00000447216 MOBPQ13875 183 aa10.58□□□□□ -0.72
TRAPPC4-203ENST00000447216 TYMSOSQ8TAI1 123 aa10.58□□□□□ -0.72
TRAPPC4-203ENST00000447216 SPCS1Q9Y6A9 102 aa10.58□□□□□ -0.72
TRAPPC4-203ENST00000447216 C9orf153Q5TBE3 101 aa10.57□□□□□ -0.72
TRAPPC4-203ENST00000447216 PPDPFLQ8WWR9 84 aa10.56□□□□□ -0.72
TRAPPC4-203ENST00000447216 C9JAW5 83 aa10.53□□□□□ -0.72
TRAPPC4-203ENST00000447216 H3BMG7 143 aa10.53□□□□□ -0.72
TRAPPC4-203ENST00000447216 BAALC-AS2P0C853 105 aa10.53□□□□□ -0.72
TRAPPC4-203ENST00000447216 MTURNQ8N3F0 131 aa10.52□□□□□ -0.73
TRAPPC4-203ENST00000447216 Q8NBF4 154 aa10.52□□□□□ -0.73
TRAPPC4-203ENST00000447216 DMBT1Q9UGM3 2413 aaPredicted RBP10.51□□□□□ -0.73
TRAPPC4-203ENST00000447216 F8WEM9 126 aa10.51□□□□□ -0.73
TRAPPC4-203ENST00000447216 NDUFV3P56181 108 aaKnown RBP10.51□□□□□ -0.73
TRAPPC4-203ENST00000447216 H3BQ85 93 aa10.5□□□□□ -0.73
TRAPPC4-203ENST00000447216 K7EP34 96 aa10.5□□□□□ -0.73
TRAPPC4-203ENST00000447216 TMEM256-PLSCR3K7ERE1 68 aa10.5□□□□□ -0.73
TRAPPC4-203ENST00000447216 A0A0G2JQZ4 141 aa10.49□□□□□ -0.73
TRAPPC4-203ENST00000447216 A0A1B0GV72 72 aa10.49□□□□□ -0.73
TRAPPC4-203ENST00000447216 SSBP3-AS1Q7Z2R9 100 aa10.49□□□□□ -0.73
TRAPPC4-203ENST00000447216 UBE2V1Q13404 147 aa10.46□□□□□ -0.73
TRAPPC4-203ENST00000447216 LINC00304Q8N9R0 145 aa10.46□□□□□ -0.73
TRAPPC4-203ENST00000447216 IGLV8-61A0A075B6I0 122 aa10.45□□□□□ -0.74
TRAPPC4-203ENST00000447216 ANKRD29Q8N6D5 301 aa10.45□□□□□ -0.74
TRAPPC4-203ENST00000447216 GTF2H5Q6ZYL4 71 aa10.43□□□□□ -0.74
TRAPPC4-203ENST00000447216 IGFL1Q6UW32 110 aa10.42□□□□□ -0.74
TRAPPC4-203ENST00000447216 HRCT1Q6UXD1 115 aa10.42□□□□□ -0.74
TRAPPC4-203ENST00000447216 A0A1B0GV90 55 aa10.41□□□□□ -0.74
TRAPPC4-203ENST00000447216 H3BT86 120 aa10.41□□□□□ -0.74
TRAPPC4-203ENST00000447216 Q6JHZ5 121 aa10.4□□□□□ -0.74
TRAPPC4-203ENST00000447216 PRO0461Q9UI25 63 aa10.4□□□□□ -0.74
TRAPPC4-203ENST00000447216 SPAG11AQ6PDA7 123 aa10.36□□□□□ -0.75
TRAPPC4-203ENST00000447216 RBM3P98179 157 aaKnown RBP10.35□□□□□ -0.75
TRAPPC4-203ENST00000447216 SPINK1P00995 79 aa10.33□□□□□ -0.76
TRAPPC4-203ENST00000447216 TRBV7-4A0A0J9YYF1 115 aa10.32□□□□□ -0.76
TRAPPC4-203ENST00000447216 JMJD7-PLA2G4BH0Y9G9 81 aa10.32□□□□□ -0.76
TRAPPC4-203ENST00000447216 CD164Q04900 197 aa10.32□□□□□ -0.76
TRAPPC4-203ENST00000447216 A0A1W2PNM2 257 aa10.31□□□□□ -0.76
TRAPPC4-203ENST00000447216 OBSCN-AS1Q96MR7 158 aa10.31□□□□□ -0.76
TRAPPC4-203ENST00000447216 DSCR8Q96T75 97 aa10.31□□□□□ -0.76
TRAPPC4-203ENST00000447216 C14orf132Q9NPU4 83 aa10.3□□□□□ -0.76
TRAPPC4-203ENST00000447216 HERC1Q15751 4861 aa10.29□□□□□ -0.76
TRAPPC4-203ENST00000447216 TRBV7-7A0A0K0K1E9 115 aa10.28□□□□□ -0.76
TRAPPC4-203ENST00000447216 F8W1H4 67 aa10.28□□□□□ -0.76
TRAPPC4-203ENST00000447216 VPS25Q9BRG1 176 aa10.28□□□□□ -0.76
TRAPPC4-203ENST00000447216 CCKP06307 115 aa10.27□□□□□ -0.77
TRAPPC4-203ENST00000447216 TEN1Q86WV5 123 aa10.27□□□□□ -0.77
TRAPPC4-203ENST00000447216 Q6Q795 121 aa10.26□□□□□ -0.77
TRAPPC4-203ENST00000447216 RETNLBQ9BQ08 111 aa10.26□□□□□ -0.77
TRAPPC4-203ENST00000447216 LOC110117498A0A087WWA1 95 aa10.25□□□□□ -0.77
TRAPPC4-203ENST00000447216 RPS29P62273 56 aaKnown RBP10.25□□□□□ -0.77
TRAPPC4-203ENST00000447216 Q6ZQT0 140 aa10.25□□□□□ -0.77
TRAPPC4-203ENST00000447216 LIMD2Q9BT23 127 aa10.24□□□□□ -0.77
TRAPPC4-203ENST00000447216 ETDBQ3ZM63 59 aa10.22□□□□□ -0.77
TRAPPC4-203ENST00000447216 A0A087WSZ3 146 aa10.21□□□□□ -0.77
TRAPPC4-203ENST00000447216 PDE6GP18545 87 aa10.19□□□□□ -0.78
TRAPPC4-203ENST00000447216 Q5XG85 94 aa10.19□□□□□ -0.78
TRAPPC4-203ENST00000447216 PRR4Q16378 134 aa10.15□□□□□ -0.78
TRAPPC4-203ENST00000447216 C1orf195Q5TG92 126 aa10.14□□□□□ -0.79
TRAPPC4-203ENST00000447216 SS18L2Q9UHA2 77 aa10.14□□□□□ -0.79
TRAPPC4-203ENST00000447216 LCE2BO14633 110 aa10.13□□□□□ -0.79
TRAPPC4-203ENST00000447216 ASB16-AS1Q495Z4 193 aa10.13□□□□□ -0.79
TRAPPC4-203ENST00000447216 C21orf62-AS1Q17RA5 79 aa10.09□□□□□ -0.79
TRAPPC4-203ENST00000447216 HMCN2Q8NDA2 5059 aa10.09□□□□□ -0.79
TRAPPC4-203ENST00000447216 Q96NJ1 140 aa10.08□□□□□ -0.8
TRAPPC4-203ENST00000447216 IGLV7-46A0A075B6I9 117 aa10.07□□□□□ -0.8
TRAPPC4-203ENST00000447216 FP248Q71RG6 208 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-203ENST00000447216 A0A1B0GW54 56 aa10.06□□□□□ -0.8
TRAPPC4-203ENST00000447216 DEFB116Q30KQ4 102 aa10.05□□□□□ -0.8
TRAPPC4-203ENST00000447216 LINC00472Q9H8W2 130 aa10.03□□□□□ -0.8
TRAPPC4-203ENST00000447216 IGKV4-1P06312 121 aa10□□□□□ -0.81
TRAPPC4-203ENST00000447216 NREPQ16612 68 aa10□□□□□ -0.81
TRAPPC4-203ENST00000447216 LPAP08519 4548 aa9.99□□□□□ -0.81
TRAPPC4-203ENST00000447216 SIGMAR1Q99720 223 aa9.99□□□□□ -0.81
TRAPPC4-203ENST00000447216 LINC00846Q9NV44 126 aa9.99□□□□□ -0.81
TRAPPC4-203ENST00000447216 Q6ZVQ6 151 aa9.96□□□□□ -0.82
TRAPPC4-203ENST00000447216 KRTAP13-3Q3SY46 172 aa9.95□□□□□ -0.82
TRAPPC4-203ENST00000447216 C9orf92A6NGG3 77 aa9.94□□□□□ -0.82
TRAPPC4-203ENST00000447216 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
TRAPPC4-203ENST00000447216 J3KT08 172 aa9.91□□□□□ -0.82
TRAPPC4-203ENST00000447216 UBL5Q9BZL1 73 aa9.91□□□□□ -0.82
TRAPPC4-203ENST00000447216 LRP2P98164 4655 aa9.91□□□□□ -0.82
TRAPPC4-203ENST00000447216 FAM240AA0A1B0GVK7 77 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms