RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 SPART-AS1P0CW21 52 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 ACYP2P14621 99 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 KRTAP13-3Q3SY46 172 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 PCOTHQ58A44 107 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 IGFL1Q6UW32 110 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 TACC2O95359 2948 aa2.55□□□□□ -2
HMGB1P16-201ENST00000447155 MMP24-AS1A0A0U1RRL7 71 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 H3BNG1 76 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 MIR22HGQ0VDD5 57 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 SPTAN1Q13813 2472 aaKnown RBP2.54□□□□□ -2
HMGB1P16-201ENST00000447155 CREBBPQ92793 2442 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 AKAP13Q12802 2813 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 MYO15AQ9UKN7 3530 aa2.54□□□□□ -2
HMGB1P16-201ENST00000447155 SPTA1P02549 2419 aa2.53□□□□□ -2
HMGB1P16-201ENST00000447155 IGKV2-24A0A0C4DH68 120 aa2.53□□□□□ -2
HMGB1P16-201ENST00000447155 HRES1P13985 223 aa2.53□□□□□ -2
HMGB1P16-201ENST00000447155 ZNF706Q9Y5V0 76 aaPredicted RBP2.53□□□□□ -2
HMGB1P16-201ENST00000447155 MAP1AP78559 2803 aaPredicted RBP2.53□□□□□ -2
HMGB1P16-201ENST00000447155 SPEGQ15772 3267 aa2.53□□□□□ -2
HMGB1P16-201ENST00000447155 DMXL2Q8TDJ6 3036 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 HTN3P15516 51 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 RPL37AP61513 92 aaKnown RBP2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 SPATA8Q6RVD6 105 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 NCOR2Q9Y618 2525 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 OTOGLQ3ZCN5 2332 aa2.52□□□□□ -2.01
HMGB1P16-201ENST00000447155 DCHS1Q96JQ0 3298 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 TLN1Q9Y490 2541 aaKnown RBP2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 LINC01556Q5JQF7 62 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 CIRBP-AS1Q8TBR5 109 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 CELSR3Q9NYQ7 3312 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 C2CD3Q4AC94 2353 aa2.51□□□□□ -2.01
HMGB1P16-201ENST00000447155 KMT2BQ9UMN6 2715 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 SPRR1BP22528 89 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 DEFB135Q30KP9 77 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 CSAG1Q6PB30 78 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 DMAC1Q96GE9 116 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 MRPL34Q9BQ48 92 aaKnown RBP2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 PRO3102Q9H379 93 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 LINC00472Q9H8W2 130 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 C8orf17Q9NRJ1 99 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 DMDP11532 3685 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 WDFY4Q6ZS81 3184 aa2.5□□□□□ -2.01
HMGB1P16-201ENST00000447155 TLN2Q9Y4G6 2542 aa2.49□□□□□ -2.01
HMGB1P16-201ENST00000447155 IGHV6-1A0A0B4J1U7 121 aa2.49□□□□□ -2.01
HMGB1P16-201ENST00000447155 C1orf134Q5TEV5 83 aa2.49□□□□□ -2.01
HMGB1P16-201ENST00000447155 HIVEP3Q5T1R4 2406 aa2.49□□□□□ -2.01
HMGB1P16-201ENST00000447155 LRBAP50851 2863 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 K7ERS5 55 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 DEFB123Q8N688 67 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 ANKRD17O75179 2603 aaKnown RBP2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 SPENQ96T58 3664 aaKnown RBP2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 SPG11Q96JI7 2443 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 CHD6Q8TD26 2715 aa2.48□□□□□ -2.01
HMGB1P16-201ENST00000447155 DCHS2Q6V1P9 2916 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 ROMO1P60602 79 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 PRLHP81277 87 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 ADM2Q7Z4H4 148 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 NBASA2RRP1 2371 aa2.47□□□□□ -2.01
HMGB1P16-201ENST00000447155 MYO9AB2RTY4 2548 aa2.46□□□□□ -2.01
HMGB1P16-201ENST00000447155 KRTAP26-1Q6PEX3 210 aa2.46□□□□□ -2.02
HMGB1P16-201ENST00000447155 ADGRG4Q8IZF6 3080 aa2.46□□□□□ -2.02
HMGB1P16-201ENST00000447155 CSPG4Q6UVK1 2322 aa2.46□□□□□ -2.02
HMGB1P16-201ENST00000447155 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
HMGB1P16-201ENST00000447155 KRTAP25-1Q3LHN0 102 aa2.45□□□□□ -2.02
HMGB1P16-201ENST00000447155 CEP295Q9C0D2 2601 aa2.45□□□□□ -2.02
HMGB1P16-201ENST00000447155 OBSCNQ5VST9 7968 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 SETXQ7Z333 2677 aaKnown RBP2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 DEFB4AO15263 64 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 LY6G6CO95867 125 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 IGLV7-43P04211 117 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 JMJD1CQ15652 2540 aa2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 SMG1Q96Q15 3661 aaKnown RBP2.44□□□□□ -2.02
HMGB1P16-201ENST00000447155 KRTAP10-8P60410 259 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 DEFB113Q30KQ7 82 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 BOD1L1Q8NFC6 3051 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 GVINP1Q7Z2Y8 2422 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 ZFHX4Q86UP3 3567 aa2.43□□□□□ -2.02
HMGB1P16-201ENST00000447155 EYSQ5T1H1 3165 aa2.42□□□□□ -2.02
HMGB1P16-201ENST00000447155 LCE3AQ5TA76 89 aa2.42□□□□□ -2.02
HMGB1P16-201ENST00000447155 CELSR2Q9HCU4 2923 aa2.42□□□□□ -2.02
HMGB1P16-201ENST00000447155 BDP1A6H8Y1 2624 aa2.42□□□□□ -2.02
HMGB1P16-201ENST00000447155 SPTBN4Q9H254 2564 aa2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 Q96NJ1 140 aa2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 CSMD1Q96PZ7 3565 aa2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 GCN1Q92616 2671 aaKnown RBP2.41□□□□□ -2.02
HMGB1P16-201ENST00000447155 ITPR1Q14643 2758 aa2.4□□□□□ -2.02
HMGB1P16-201ENST00000447155 A0A096LNI7 61 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 A0A0G2JQZ4 141 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 A0A1W2PNN7 141 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 A8MUU9 505 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 KRTAP13-2Q52LG2 175 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 LOC400499M0QZD8 3231 aa2.4□□□□□ -2.03
HMGB1P16-201ENST00000447155 CELSR1Q9NYQ6 3014 aa2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 UTP20O75691 2785 aaKnown RBP2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 ASH1LQ9NR48 2969 aaKnown RBP2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 ZNF292O60281 2723 aa2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 DMXL1Q9Y485 3027 aa2.39□□□□□ -2.03
HMGB1P16-201ENST00000447155 DOPEY1Q5JWR5 2465 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms