RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 C9orf92A6NGG3 77 aa4.42□□□□□ -1.7
CDK12-202ENST00000447079 SMR3BP02814 79 aaPredicted RBP4.42□□□□□ -1.7
CDK12-202ENST00000447079 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
CDK12-202ENST00000447079 UNC79Q9P2D8 2635 aa4.42□□□□□ -1.7
CDK12-202ENST00000447079 SETXQ7Z333 2677 aaKnown RBP4.41□□□□□ -1.7
CDK12-202ENST00000447079 TNP2Q05952 138 aa4.41□□□□□ -1.7
CDK12-202ENST00000447079 NBEAL1Q6ZS30 2694 aa4.41□□□□□ -1.7
CDK12-202ENST00000447079 LAMA3Q16787 3333 aa4.41□□□□□ -1.7
CDK12-202ENST00000447079 OXTP01178 125 aa4.41□□□□□ -1.7
CDK12-202ENST00000447079 DSPP15924 2871 aaKnown RBP4.41□□□□□ -1.7
CDK12-202ENST00000447079 PRR26Q8N8Z3 221 aa4.4□□□□□ -1.7
CDK12-202ENST00000447079 SPRR1AP35321 89 aa4.4□□□□□ -1.71
CDK12-202ENST00000447079 STAB1Q9NY15 2570 aa4.39□□□□□ -1.71
CDK12-202ENST00000447079 A0A0C4DFX4 3053 aa4.39□□□□□ -1.71
CDK12-202ENST00000447079 COL6A5A8TX70 2615 aa4.39□□□□□ -1.71
CDK12-202ENST00000447079 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
CDK12-202ENST00000447079 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
CDK12-202ENST00000447079 VPS13AQ96RL7 3174 aa4.38□□□□□ -1.71
CDK12-202ENST00000447079 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.37□□□□□ -1.71
CDK12-202ENST00000447079 A0A0G2JQZ4 141 aa4.37□□□□□ -1.71
CDK12-202ENST00000447079 DMAC1Q96GE9 116 aa4.37□□□□□ -1.71
CDK12-202ENST00000447079 BRCA2P51587 3418 aa4.37□□□□□ -1.71
CDK12-202ENST00000447079 SPRR1BP22528 89 aa4.37□□□□□ -1.71
CDK12-202ENST00000447079 ASB16-AS1Q495Z4 193 aa4.37□□□□□ -1.71
CDK12-202ENST00000447079 PRUNE2Q8WUY3 3088 aa4.36□□□□□ -1.71
CDK12-202ENST00000447079 TRIOO75962 3097 aa4.36□□□□□ -1.71
CDK12-202ENST00000447079 Q6ZSA8 131 aa4.35□□□□□ -1.71
CDK12-202ENST00000447079 CSAG1Q6PB30 78 aa4.35□□□□□ -1.71
CDK12-202ENST00000447079 A0A1B0GU33 70 aa4.34□□□□□ -1.71
CDK12-202ENST00000447079 MAP1AP78559 2803 aaPredicted RBP4.34□□□□□ -1.72
CDK12-202ENST00000447079 A0A0A0MQY5 61 aa4.33□□□□□ -1.72
CDK12-202ENST00000447079 NSD1Q96L73 2696 aaPredicted RBP4.32□□□□□ -1.72
CDK12-202ENST00000447079 WDFY4Q6ZS81 3184 aa4.32□□□□□ -1.72
CDK12-202ENST00000447079 SPINK7P58062 85 aa4.32□□□□□ -1.72
CDK12-202ENST00000447079 A0A0D9SG42 100 aa4.31□□□□□ -1.72
CDK12-202ENST00000447079 LCE6AA0A183 80 aa4.31□□□□□ -1.72
CDK12-202ENST00000447079 HRES1P13985 223 aa4.31□□□□□ -1.72
CDK12-202ENST00000447079 Q8N1X5 172 aa4.31□□□□□ -1.72
CDK12-202ENST00000447079 UTP20O75691 2785 aaKnown RBP4.31□□□□□ -1.72
CDK12-202ENST00000447079 NOTCH1P46531 2555 aa4.31□□□□□ -1.72
CDK12-202ENST00000447079 ZCCHC13Q8WW36 166 aaKnown RBP4.3□□□□□ -1.72
CDK12-202ENST00000447079 LINC00483Q53H64 154 aa4.3□□□□□ -1.72
CDK12-202ENST00000447079 FRYQ5TBA9 3013 aa4.3□□□□□ -1.72
CDK12-202ENST00000447079 CDH23Q9H251 3354 aa4.3□□□□□ -1.72
CDK12-202ENST00000447079 KRTAP26-1Q6PEX3 210 aa4.3□□□□□ -1.72
CDK12-202ENST00000447079 FRYLO94915 3013 aa4.3□□□□□ -1.72
CDK12-202ENST00000447079 MMP24-AS1A0A0U1RRL7 71 aa4.29□□□□□ -1.72
CDK12-202ENST00000447079 XIRP2A4UGR9 3374 aa4.29□□□□□ -1.72
CDK12-202ENST00000447079 LINC00472Q9H8W2 130 aa4.28□□□□□ -1.72
CDK12-202ENST00000447079 SEC61BP60468 96 aaKnown RBP4.28□□□□□ -1.72
CDK12-202ENST00000447079 FLNCQ14315 2725 aa4.27□□□□□ -1.73
CDK12-202ENST00000447079 KRTAP21-3Q3LHN1 58 aa4.26□□□□□ -1.73
CDK12-202ENST00000447079 LAMA1P25391 3075 aa4.26□□□□□ -1.73
CDK12-202ENST00000447079 CAMK2N1Q7Z7J9 78 aa4.26□□□□□ -1.73
CDK12-202ENST00000447079 KRTAP1-5Q9BYS1 174 aa4.25□□□□□ -1.73
CDK12-202ENST00000447079 STAB2Q8WWQ8 2551 aa4.25□□□□□ -1.73
CDK12-202ENST00000447079 LRBAP50851 2863 aa4.24□□□□□ -1.73
CDK12-202ENST00000447079 S4R3F8 94 aa4.24□□□□□ -1.73
CDK12-202ENST00000447079 Q5VSD8 79 aa4.24□□□□□ -1.73
CDK12-202ENST00000447079 Q8NDZ9 215 aa4.24□□□□□ -1.73
CDK12-202ENST00000447079 APCP25054 2843 aa4.24□□□□□ -1.73
CDK12-202ENST00000447079 TNRC18O15417 2968 aaPredicted RBP4.24□□□□□ -1.73
CDK12-202ENST00000447079 Q6ZR54 194 aa4.24□□□□□ -1.73
CDK12-202ENST00000447079 ITPR1Q14643 2758 aa4.24□□□□□ -1.73
CDK12-202ENST00000447079 USP34Q70CQ2 3546 aa4.23□□□□□ -1.73
CDK12-202ENST00000447079 NBEAL2Q6ZNJ1 2754 aa4.23□□□□□ -1.73
CDK12-202ENST00000447079 RPS29P62273 56 aaKnown RBP4.23□□□□□ -1.73
CDK12-202ENST00000447079 A6NN06 94 aa4.22□□□□□ -1.73
CDK12-202ENST00000447079 UBR5O95071 2799 aaPredicted RBP4.22□□□□□ -1.73
CDK12-202ENST00000447079 KRTAP4-16G5E9R7 235 aaPredicted RBP4.21□□□□□ -1.74
CDK12-202ENST00000447079 Q5W150 140 aa4.21□□□□□ -1.74
CDK12-202ENST00000447079 ROMO1P60602 79 aa4.21□□□□□ -1.74
CDK12-202ENST00000447079 KRTAP10-1P60331 282 aa4.2□□□□□ -1.74
CDK12-202ENST00000447079 KRTAP16-1A8MUX0 517 aa4.2□□□□□ -1.74
CDK12-202ENST00000447079 M0R2T5 61 aa4.2□□□□□ -1.74
CDK12-202ENST00000447079 DNAH14Q0VDD8 3507 aa4.19□□□□□ -1.74
CDK12-202ENST00000447079 KALRNO60229 2985 aa4.18□□□□□ -1.74
CDK12-202ENST00000447079 CELSR3Q9NYQ7 3312 aa4.18□□□□□ -1.74
CDK12-202ENST00000447079 SPATA8Q6RVD6 105 aa4.18□□□□□ -1.74
CDK12-202ENST00000447079 KRTAP10-2P60368 255 aa4.17□□□□□ -1.74
CDK12-202ENST00000447079 RPL37P61927 97 aaKnown RBP4.16□□□□□ -1.74
CDK12-202ENST00000447079 SPTBN5Q9NRC6 3674 aaKnown RBP4.16□□□□□ -1.74
CDK12-202ENST00000447079 SZT2Q5T011 3432 aa4.16□□□□□ -1.74
CDK12-202ENST00000447079 UNC80Q8N2C7 3258 aa4.16□□□□□ -1.74
CDK12-202ENST00000447079 DMBT1Q9UGM3 2413 aaPredicted RBP4.15□□□□□ -1.74
CDK12-202ENST00000447079 KRTAP29-1A8MX34 341 aaPredicted RBP4.14□□□□□ -1.75
CDK12-202ENST00000447079 A0A087X002 238 aa4.14□□□□□ -1.75
CDK12-202ENST00000447079 DMXL2Q8TDJ6 3036 aa4.14□□□□□ -1.75
CDK12-202ENST00000447079 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
CDK12-202ENST00000447079 HIVEP1P15822 2718 aa4.13□□□□□ -1.75
CDK12-202ENST00000447079 Q6ZRN7 208 aaPredicted RBP4.13□□□□□ -1.75
CDK12-202ENST00000447079 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
CDK12-202ENST00000447079 VCANP13611 3396 aa4.12□□□□□ -1.75
CDK12-202ENST00000447079 R4GN34 69 aa4.12□□□□□ -1.75
CDK12-202ENST00000447079 ZZEF1O43149 2961 aa4.12□□□□□ -1.75
CDK12-202ENST00000447079 NBEAQ8NFP9 2946 aa4.12□□□□□ -1.75
CDK12-202ENST00000447079 BOD1L1Q8NFC6 3051 aa4.11□□□□□ -1.75
CDK12-202ENST00000447079 NIPBLQ6KC79 2804 aaeCLIP4.1□□□□□ -1.751e-6■■■■□ 26.4
CDK12-202ENST00000447079 ADGRG4Q8IZF6 3080 aa4.09□□□□□ -1.75
CDK12-202ENST00000447079 COL12A1Q99715 3063 aa4.09□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 330 ms