RNA–Protein interactions for RNA: ENST00000445481.1

RPL39P40-201, Transcript of ribosomal protein L39 pseudogene 40, humanhuman

BASIC

Gene RPL39P40, Length 146 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P40-201ENST00000445481 TNRC18O15417 2968 aaPredicted RBP1.61□□□□□ -2.15
RPL39P40-201ENST00000445481 WDFY4Q6ZS81 3184 aa1.61□□□□□ -2.15
RPL39P40-201ENST00000445481 ROS1P08922 2347 aa1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 KMT2BQ9UMN6 2715 aaPredicted RBP1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 NBDYA0A0U1RRE5 68 aa1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 DEFB135Q30KP9 77 aa1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 C14orf177Q52M58 125 aa1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 CAMK2N1Q7Z7J9 78 aa1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 KRTAP13-1Q8IUC0 172 aa1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 LAMA3Q16787 3333 aa1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 VCANP13611 3396 aa1.6□□□□□ -2.15
RPL39P40-201ENST00000445481 SPTBN5Q9NRC6 3674 aaKnown RBP1.59□□□□□ -2.15
RPL39P40-201ENST00000445481 CFAP54Q96N23 3096 aa1.59□□□□□ -2.15
RPL39P40-201ENST00000445481 CRIPTQ9P021 101 aa1.59□□□□□ -2.15
RPL39P40-201ENST00000445481 TPRP12270 2363 aaKnown RBP1.59□□□□□ -2.16
RPL39P40-201ENST00000445481 ALMS1Q8TCU4 4167 aa1.59□□□□□ -2.16
RPL39P40-201ENST00000445481 PTPRZ1P23471 2315 aaPredicted RBP1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 DCHS1Q96JQ0 3298 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 CFAP47Q6ZTR5 3102 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 TRANK1O15050 2925 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 SDK1Q7Z5N4 2213 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 NOTCH2Q04721 2471 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 WDFY3Q8IZQ1 3526 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 A0A096LNI7 61 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 DEFB4AO15263 64 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 RPL37P61927 97 aaKnown RBP1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 LCE3AQ5TA76 89 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 CNOT1A5YKK6 2376 aaKnown RBP1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 FRYLO94915 3013 aa1.58□□□□□ -2.16
RPL39P40-201ENST00000445481 C5orf42Q9H799 3197 aa1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 PCNX1Q96RV3 2341 aa1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 TRIOO75962 3097 aa1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 ANKHD1Q8IWZ3 2542 aaKnown RBP1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 TPRXLQ17RH7 258 aa1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 CIRBP-AS1Q8TBR5 109 aa1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 EP300Q09472 2414 aaPredicted RBP1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 LAMA2P24043 3122 aaKnown RBP1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 FREM2Q5SZK8 3169 aa1.57□□□□□ -2.16
RPL39P40-201ENST00000445481 FRYQ5TBA9 3013 aa1.56□□□□□ -2.16
RPL39P40-201ENST00000445481 MGAQ8IWI9 3026 aa1.56□□□□□ -2.16
RPL39P40-201ENST00000445481 C2CD3Q4AC94 2353 aa1.56□□□□□ -2.16
RPL39P40-201ENST00000445481 GPR179Q6PRD1 2367 aa1.56□□□□□ -2.16
RPL39P40-201ENST00000445481 CREBBPQ92793 2442 aa1.56□□□□□ -2.16
RPL39P40-201ENST00000445481 RP1L1Q8IWN7 2480 aaPredicted RBP1.56□□□□□ -2.16
RPL39P40-201ENST00000445481 CDH23Q9H251 3354 aa1.55□□□□□ -2.16
RPL39P40-201ENST00000445481 COL6A6A6NMZ7 2263 aa1.55□□□□□ -2.16
RPL39P40-201ENST00000445481 PRUNE2Q8WUY3 3088 aa1.55□□□□□ -2.16
RPL39P40-201ENST00000445481 SPINK1P00995 79 aa1.55□□□□□ -2.16
RPL39P40-201ENST00000445481 LCE3EQ5T5B0 92 aa1.55□□□□□ -2.16
RPL39P40-201ENST00000445481 SPINK6Q6UWN8 80 aa1.55□□□□□ -2.16
RPL39P40-201ENST00000445481 CACNA1HO95180 2353 aa1.55□□□□□ -2.16
RPL39P40-201ENST00000445481 APC2O95996 2303 aa1.54□□□□□ -2.16
RPL39P40-201ENST00000445481 AKAP6Q13023 2319 aa1.54□□□□□ -2.16
RPL39P40-201ENST00000445481 KRTAP10-8P60410 259 aa1.54□□□□□ -2.16
RPL39P40-201ENST00000445481 SPEGQ15772 3267 aa1.54□□□□□ -2.16
RPL39P40-201ENST00000445481 DMDP11532 3685 aa1.54□□□□□ -2.16
RPL39P40-201ENST00000445481 KALRNO60229 2985 aa1.53□□□□□ -2.16
RPL39P40-201ENST00000445481 ZFHX4Q86UP3 3567 aa1.53□□□□□ -2.16
RPL39P40-201ENST00000445481 CUL9Q8IWT3 2517 aa1.53□□□□□ -2.16
RPL39P40-201ENST00000445481 TYMSOSQ8TAI1 123 aa1.53□□□□□ -2.16
RPL39P40-201ENST00000445481 SPENQ96T58 3664 aaKnown RBP1.53□□□□□ -2.17
RPL39P40-201ENST00000445481 MYO15AQ9UKN7 3530 aa1.53□□□□□ -2.17
RPL39P40-201ENST00000445481 LAMA1P25391 3075 aa1.52□□□□□ -2.17
RPL39P40-201ENST00000445481 MAPK1IP1LQ8NDC0 245 aa1.52□□□□□ -2.17
RPL39P40-201ENST00000445481 SMG1Q96Q15 3661 aaKnown RBP1.52□□□□□ -2.17
RPL39P40-201ENST00000445481 NCOR1O75376 2440 aa1.51□□□□□ -2.17
RPL39P40-201ENST00000445481 CSMD1Q96PZ7 3565 aa1.51□□□□□ -2.17
RPL39P40-201ENST00000445481 PLAC4Q8WY50 150 aa1.51□□□□□ -2.17
RPL39P40-201ENST00000445481 ZDBF2Q9HCK1 2354 aa1.5□□□□□ -2.17
RPL39P40-201ENST00000445481 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.5□□□□□ -2.17
RPL39P40-201ENST00000445481 SPACA4Q8TDM5 124 aa1.5□□□□□ -2.17
RPL39P40-201ENST00000445481 ABCA2Q9BZC7 2435 aa1.5□□□□□ -2.17
RPL39P40-201ENST00000445481 CELSR3Q9NYQ7 3312 aa1.5□□□□□ -2.17
RPL39P40-201ENST00000445481 REV3LO60673 3130 aa1.49□□□□□ -2.17
RPL39P40-201ENST00000445481 DMXL2Q8TDJ6 3036 aa1.49□□□□□ -2.17
RPL39P40-201ENST00000445481 ACACAQ13085 2346 aa1.49□□□□□ -2.17
RPL39P40-201ENST00000445481 C10orf95Q9H7T3 257 aa1.49□□□□□ -2.17
RPL39P40-201ENST00000445481 S4R3F8 94 aa1.49□□□□□ -2.17
RPL39P40-201ENST00000445481 AKAP9Q99996 3911 aa1.48□□□□□ -2.17
RPL39P40-201ENST00000445481 DSPP15924 2871 aaKnown RBP1.48□□□□□ -2.17
RPL39P40-201ENST00000445481 KRTAP5-5Q701N2 237 aaPredicted RBP1.48□□□□□ -2.17
RPL39P40-201ENST00000445481 PRO2289Q9P1D8 64 aa1.48□□□□□ -2.17
RPL39P40-201ENST00000445481 TRIOBPQ9H2D6 2365 aa1.48□□□□□ -2.17
RPL39P40-201ENST00000445481 ADGRG4Q8IZF6 3080 aa1.48□□□□□ -2.17
RPL39P40-201ENST00000445481 PIEZO2Q9H5I5 2752 aa1.47□□□□□ -2.17
RPL39P40-201ENST00000445481 APLNQ9ULZ1 77 aa1.47□□□□□ -2.17
RPL39P40-201ENST00000445481 CEP290O15078 2479 aa1.47□□□□□ -2.17
RPL39P40-201ENST00000445481 SPTAN1Q13813 2472 aaKnown RBP1.47□□□□□ -2.17
RPL39P40-201ENST00000445481 AKAP13Q12802 2813 aa1.46□□□□□ -2.18
RPL39P40-201ENST00000445481 ANKRD17O75179 2603 aaKnown RBP1.46□□□□□ -2.18
RPL39P40-201ENST00000445481 NBPF19A0A087WUL8 3843 aa1.46□□□□□ -2.18
RPL39P40-201ENST00000445481 RPS29P62273 56 aaKnown RBP1.46□□□□□ -2.18
RPL39P40-201ENST00000445481 Q6ZRN7 208 aaPredicted RBP1.46□□□□□ -2.18
RPL39P40-201ENST00000445481 DEFB123Q8N688 67 aa1.46□□□□□ -2.18
RPL39P40-201ENST00000445481 MAP1AP78559 2803 aaPredicted RBP1.46□□□□□ -2.18
RPL39P40-201ENST00000445481 SPTA1P02549 2419 aa1.45□□□□□ -2.18
RPL39P40-201ENST00000445481 A0A0D9SG42 100 aa1.45□□□□□ -2.18
RPL39P40-201ENST00000445481 PP632Q6XCG6 107 aa1.45□□□□□ -2.18
RPL39P40-201ENST00000445481 UBE2DNLQ8IWF7 75 aa1.45□□□□□ -2.18
RPL39P40-201ENST00000445481 NBASA2RRP1 2371 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms