RNA–Protein interactions for RNA: ENST00000444746.6

RIF1-205, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 7,897 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-205ENST00000444746 RBM12B-AS1Q9P1G2 102 aa4.83□□□□□ -1.64
RIF1-205ENST00000444746 USP34Q70CQ2 3546 aa4.83□□□□□ -1.64
RIF1-205ENST00000444746 CD164Q04900 197 aa4.83□□□□□ -1.64
RIF1-205ENST00000444746 PLAC8Q9NZF1 115 aa4.83□□□□□ -1.64
RIF1-205ENST00000444746 KRTAP11-1Q8IUC1 163 aa4.82□□□□□ -1.64
RIF1-205ENST00000444746 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
RIF1-205ENST00000444746 FLNBO75369 2602 aaKnown RBP4.81□□□□□ -1.64
RIF1-205ENST00000444746 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
RIF1-205ENST00000444746 TRANK1O15050 2925 aa4.81□□□□□ -1.64
RIF1-205ENST00000444746 MGAM2Q2M2H8 2515 aa4.81□□□□□ -1.64
RIF1-205ENST00000444746 SPRR1AP35321 89 aa4.8□□□□□ -1.64
RIF1-205ENST00000444746 MYO15AQ9UKN7 3530 aa4.8□□□□□ -1.64
RIF1-205ENST00000444746 CFAP47Q6ZTR5 3102 aa4.8□□□□□ -1.64
RIF1-205ENST00000444746 M0R2T5 61 aa4.8□□□□□ -1.64
RIF1-205ENST00000444746 WIPF1O43516 503 aa4.79□□□□□ -1.64
RIF1-205ENST00000444746 Q5W150 140 aa4.79□□□□□ -1.64
RIF1-205ENST00000444746 Q5VSD8 79 aa4.79□□□□□ -1.64
RIF1-205ENST00000444746 A0A087X002 238 aa4.78□□□□□ -1.64
RIF1-205ENST00000444746 NOTCH2NLQ7Z3S9 236 aa4.78□□□□□ -1.64
RIF1-205ENST00000444746 FLNAP21333 2647 aaKnown RBP4.77□□□□□ -1.65
RIF1-205ENST00000444746 OXTP01178 125 aa4.77□□□□□ -1.65
RIF1-205ENST00000444746 Q5XG85 94 aa4.77□□□□□ -1.65
RIF1-205ENST00000444746 ITPR3Q14573 2671 aa4.77□□□□□ -1.65
RIF1-205ENST00000444746 ZCCHC13Q8WW36 166 aaKnown RBP4.77□□□□□ -1.65
RIF1-205ENST00000444746 SPINK7P58062 85 aa4.76□□□□□ -1.65
RIF1-205ENST00000444746 LINC00472Q9H8W2 130 aa4.76□□□□□ -1.65
RIF1-205ENST00000444746 FP248Q71RG6 208 aaPredicted RBP4.76□□□□□ -1.65
RIF1-205ENST00000444746 SPANXA2-OT1Q8N9U9 137 aa4.75□□□□□ -1.65
RIF1-205ENST00000444746 FRYQ5TBA9 3013 aa4.75□□□□□ -1.65
RIF1-205ENST00000444746 CR1P17927 2039 aa4.75□□□□□ -1.65
RIF1-205ENST00000444746 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
RIF1-205ENST00000444746 A0A1B0GU33 70 aa4.73□□□□□ -1.65
RIF1-205ENST00000444746 KTN1-AS1Q86SY8 53 aa4.73□□□□□ -1.65
RIF1-205ENST00000444746 KRTAP7-1Q8IUC3 87 aa4.73□□□□□ -1.65
RIF1-205ENST00000444746 BOD1L1Q8NFC6 3051 aa4.72□□□□□ -1.65
RIF1-205ENST00000444746 USP24Q9UPU5 2620 aa4.72□□□□□ -1.65
RIF1-205ENST00000444746 FRYLO94915 3013 aa4.72□□□□□ -1.65
RIF1-205ENST00000444746 S4R3F8 94 aa4.71□□□□□ -1.65
RIF1-205ENST00000444746 CAMK2N1Q7Z7J9 78 aa4.7□□□□□ -1.66
RIF1-205ENST00000444746 Q1T7F1 81 aa4.7□□□□□ -1.66
RIF1-205ENST00000444746 ATMQ13315 3056 aa4.69□□□□□ -1.66
RIF1-205ENST00000444746 LCE6AA0A183 80 aa4.69□□□□□ -1.66
RIF1-205ENST00000444746 Q5VV11 94 aa4.69□□□□□ -1.66
RIF1-205ENST00000444746 SPATA8Q6RVD6 105 aa4.69□□□□□ -1.66
RIF1-205ENST00000444746 LCA10Q71F78 164 aa4.69□□□□□ -1.66
RIF1-205ENST00000444746 ATRQ13535 2644 aa4.69□□□□□ -1.66
RIF1-205ENST00000444746 DSPP15924 2871 aaKnown RBP4.68□□□□□ -1.66
RIF1-205ENST00000444746 SPRR1BP22528 89 aa4.68□□□□□ -1.66
RIF1-205ENST00000444746 KRTAP4-16G5E9R7 235 aaPredicted RBP4.68□□□□□ -1.66
RIF1-205ENST00000444746 LINC01558Q9Y6Z2 57 aa4.66□□□□□ -1.66
RIF1-205ENST00000444746 KALRNO60229 2985 aa4.65□□□□□ -1.67
RIF1-205ENST00000444746 CFAP46Q8IYW2 2715 aa4.65□□□□□ -1.67
RIF1-205ENST00000444746 Q75L30 129 aa4.65□□□□□ -1.67
RIF1-205ENST00000444746 Q6ZR54 194 aa4.64□□□□□ -1.67
RIF1-205ENST00000444746 CSAG1Q6PB30 78 aa4.64□□□□□ -1.67
RIF1-205ENST00000444746 HELZ2Q9BYK8 2649 aaKnown RBP4.63□□□□□ -1.67
RIF1-205ENST00000444746 TACC2O95359 2948 aa4.62□□□□□ -1.67
RIF1-205ENST00000444746 CENPEQ02224 2701 aa4.62□□□□□ -1.67
RIF1-205ENST00000444746 LINC00483Q53H64 154 aa4.62□□□□□ -1.67
RIF1-205ENST00000444746 ADGRG4Q8IZF6 3080 aa4.62□□□□□ -1.67
RIF1-205ENST00000444746 REV3LO60673 3130 aa4.61□□□□□ -1.67
RIF1-205ENST00000444746 Q6ZRN7 208 aaPredicted RBP4.61□□□□□ -1.67
RIF1-205ENST00000444746 MAST4O15021 2626 aa4.6□□□□□ -1.67
RIF1-205ENST00000444746 COL12A1Q99715 3063 aa4.6□□□□□ -1.67
RIF1-205ENST00000444746 CHD6Q8TD26 2715 aa4.6□□□□□ -1.67
RIF1-205ENST00000444746 NBEAL2Q6ZNJ1 2754 aa4.59□□□□□ -1.67
RIF1-205ENST00000444746 KRTAP29-1A8MX34 341 aaPredicted RBP4.59□□□□□ -1.67
RIF1-205ENST00000444746 NBEAQ8NFP9 2946 aa4.59□□□□□ -1.67
RIF1-205ENST00000444746 ADM2Q7Z4H4 148 aa4.59□□□□□ -1.67
RIF1-205ENST00000444746 R4GN34 69 aa4.59□□□□□ -1.67
RIF1-205ENST00000444746 TEP1Q99973 2627 aaKnown RBP4.59□□□□□ -1.68
RIF1-205ENST00000444746 A8MU10 97 aa4.59□□□□□ -1.68
RIF1-205ENST00000444746 LRBAP50851 2863 aa4.58□□□□□ -1.68
RIF1-205ENST00000444746 DMXL2Q8TDJ6 3036 aa4.58□□□□□ -1.68
RIF1-205ENST00000444746 KRTAP13-2Q52LG2 175 aa4.58□□□□□ -1.68
RIF1-205ENST00000444746 M0QZ58 72 aa4.58□□□□□ -1.68
RIF1-205ENST00000444746 ZNF292O60281 2723 aa4.58□□□□□ -1.68
RIF1-205ENST00000444746 MAP1AP78559 2803 aaPredicted RBP4.56□□□□□ -1.68
RIF1-205ENST00000444746 DMAC1Q96GE9 116 aa4.55□□□□□ -1.68
RIF1-205ENST00000444746 H1FX-AS1Q4G0G2 97 aa4.54□□□□□ -1.68
RIF1-205ENST00000444746 TEX15Q9BXT5 2789 aa4.54□□□□□ -1.68
RIF1-205ENST00000444746 ZFHX4Q86UP3 3567 aa4.54□□□□□ -1.68
RIF1-205ENST00000444746 LOC400499M0QZD8 3231 aa4.54□□□□□ -1.68
RIF1-205ENST00000444746 WDFY3Q8IZQ1 3526 aa4.52□□□□□ -1.69
RIF1-205ENST00000444746 ASPMQ8IZT6 3477 aa4.52□□□□□ -1.69
RIF1-205ENST00000444746 IGSF10Q6WRI0 2623 aa4.52□□□□□ -1.69
RIF1-205ENST00000444746 TNRC18O15417 2968 aaPredicted RBP4.51□□□□□ -1.69
RIF1-205ENST00000444746 SEC61BP60468 96 aaKnown RBP4.51□□□□□ -1.69
RIF1-205ENST00000444746 RELNP78509 3460 aa4.5□□□□□ -1.69
RIF1-205ENST00000444746 DCHS1Q96JQ0 3298 aa4.5□□□□□ -1.69
RIF1-205ENST00000444746 DMXL1Q9Y485 3027 aa4.5□□□□□ -1.69
RIF1-205ENST00000444746 GCN1Q92616 2671 aaKnown RBP4.49□□□□□ -1.69
RIF1-205ENST00000444746 RPL37P61927 97 aaKnown RBP4.48□□□□□ -1.69
RIF1-205ENST00000444746 CRYBG3Q68DQ2 2970 aa4.47□□□□□ -1.69
RIF1-205ENST00000444746 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
RIF1-205ENST00000444746 ZZEF1O43149 2961 aa4.47□□□□□ -1.69
RIF1-205ENST00000444746 KRTAP13-1Q8IUC0 172 aa4.47□□□□□ -1.69
RIF1-205ENST00000444746 ROMO1P60602 79 aa4.45□□□□□ -1.7
RIF1-205ENST00000444746 ASH1LQ9NR48 2969 aaKnown RBP4.45□□□□□ -1.7
RIF1-205ENST00000444746 UNC79Q9P2D8 2635 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms